mRNA_P-wetherbeei_contig8003.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8003.1.1
Unique NamemRNA_P-wetherbeei_contig8003.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A0N4V1N0_ENTVE (Protein-serine/threonine kinase n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V1N0_ENTVE)

HSP 1 Score: 69.3 bits (168), Expect = 1.190e-12
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 1
Query:   13 DGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            DG  PPLAGYG GLPLSR+YARYF GD+ L+SMEGFGTD
Sbjct:  313 DGTQPPLAGYGYGLPLSRLYARYFHGDMFLVSMEGFGTD 351          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A3P7IH11_STRVU (Protein-serine/threonine kinase n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7IH11_STRVU)

HSP 1 Score: 65.1 bits (157), Expect = 1.310e-12
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 1
Query:   13 DGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            DG   PLAGYG GLPLSR+YARYF GDL L+SMEG+GTD
Sbjct:   11 DGTQAPLAGYGYGLPLSRLYARYFLGDLFLVSMEGYGTD 49          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A2H2IZB7_CAEJA (Protein-serine/threonine kinase n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IZB7_CAEJA)

HSP 1 Score: 65.1 bits (157), Expect = 1.750e-12
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 1
Query:   13 DGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            DG   PLAGYG GLPLSR+YARYF GDL L+SMEG+GTD
Sbjct:   63 DGTQAPLAGYGYGLPLSRLYARYFLGDLFLVSMEGYGTD 101          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A1C7LKN8_GRIFR (Protein-serine/threonine kinase n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7LKN8_GRIFR)

HSP 1 Score: 63.5 bits (153), Expect = 2.780e-12
Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   28 PLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            P+AG+G GLPLSR+YARYFGGDL L+SM+GFGTD
Sbjct:   22 PMAGFGYGLPLSRLYARYFGGDLRLISMDGFGTD 55          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A7S0V6I7_9CHLO (Protein-serine/threonine kinase n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V6I7_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 3.040e-12
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1
Query:    1 MEDDDGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            +E D+  P  LAGYG GLPLSR+YARYFGGDL ++SMEG+GTD
Sbjct:  333 LEGDEAGPVVLAGYGYGLPLSRLYARYFGGDLQMISMEGYGTD 375          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: PDK_ASCSU ([Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial n=4 Tax=Ascaridoidea TaxID=33256 RepID=PDK_ASCSU)

HSP 1 Score: 68.2 bits (165), Expect = 3.070e-12
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 1
Query:   13 DGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            DG  PPLAGYG GLPLSR+YARYF GD+ L+SMEG+GTD
Sbjct:  313 DGTQPPLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTD 351          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: D8LL33_ECTSI (Protein-serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL33_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.220e-12
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 1
Query:   25 PPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTDR 132
            PPLAG+G+GLPLSRVYARYFGGD++L SMEGFG DR
Sbjct:  379 PPLAGFGMGLPLSRVYARYFGGDVLLKSMEGFGMDR 414          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A699YC42_HAELA (Protein-serine/threonine kinase n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YC42_HAELA)

HSP 1 Score: 66.6 bits (161), Expect = 3.820e-12
Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 1
Query:    1 MEDDDGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            ++D+DG P  LAGYG GLP+SR+YARYFGGDL ++SMEG+GTD
Sbjct:  166 VQDNDG-PVVLAGYGYGLPISRLYARYFGGDLQIISMEGYGTD 207          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A0A367J5I8_RHIST (Protein-serine/threonine kinase (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J5I8_RHIST)

HSP 1 Score: 63.2 bits (152), Expect = 3.940e-12
Identity = 26/34 (76.47%), Postives = 32/34 (94.12%), Query Frame = 1
Query:   28 PLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            P+AG+G GLP+SR+YARYFGGDL L+SMEG+GTD
Sbjct:   21 PMAGFGYGLPISRLYARYFGGDLKLISMEGYGTD 54          
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Match: A8I520_CHLRE (Protein-serine/threonine kinase n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8I520_CHLRE)

HSP 1 Score: 67.8 bits (164), Expect = 4.220e-12
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1
Query:    1 MEDDDGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTD 129
            +ED D  P  LAGYG GLP+SR+YARYFGGDL ++SMEG+GTD
Sbjct:  343 VEDVDSGPVVLAGYGYGLPISRLYARYFGGDLQIISMEGYGTD 385          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8003.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0N4V1N0_ENTVE1.190e-1279.49Protein-serine/threonine kinase n=1 Tax=Enterobius... [more]
A0A3P7IH11_STRVU1.310e-1276.92Protein-serine/threonine kinase n=1 Tax=Strongylus... [more]
A0A2H2IZB7_CAEJA1.750e-1276.92Protein-serine/threonine kinase n=1 Tax=Caenorhabd... [more]
A0A1C7LKN8_GRIFR2.780e-1279.41Protein-serine/threonine kinase n=1 Tax=Grifola fr... [more]
A0A7S0V6I7_9CHLO3.040e-1269.77Protein-serine/threonine kinase n=1 Tax=Polytomell... [more]
PDK_ASCSU3.070e-1276.92[Pyruvate dehydrogenase (acetyl-transferring)] kin... [more]
D8LL33_ECTSI3.220e-1283.33Protein-serine/threonine kinase n=1 Tax=Ectocarpus... [more]
A0A699YC42_HAELA3.820e-1269.77Protein-serine/threonine kinase n=1 Tax=Haematococ... [more]
A0A367J5I8_RHIST3.940e-1276.47Protein-serine/threonine kinase (Fragment) n=1 Tax... [more]
A8I520_CHLRE4.220e-1269.77Protein-serine/threonine kinase n=1 Tax=Chlamydomo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8003contigP-wetherbeei_contig8003:176..307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LL33
PFAMsBCDHK_Adom3,HATPase_c
Model size132
Max annot lvl2759|Eukaryota
KEGG koko:K00898,ko:K08776,ko:K17915
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue5.28e-13
EggNOG OGsCOG0642@1|root,KOG0787@2759|Eukaryota
EC2.7.11.2
Descriptionpyruvate dehydrogenase (acetyl-transferring) kinase activity
Cds size132
COG categoryT
BRITEko00000,ko01000,ko01001,ko01002,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187015.0734222-CDS-P-wetherbeei_contig8003:175..3071683187015.0734222-CDS-P-wetherbeei_contig8003:175..307Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8003 176..307 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8003.1.1prot_P-wetherbeei_contig8003.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8003 176..307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8003.1.1

>prot_P-wetherbeei_contig8003.1.1 ID=prot_P-wetherbeei_contig8003.1.1|Name=mRNA_P-wetherbeei_contig8003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=44bp
MEDDDGRPPPLAGYGVGLPLSRVYARYFGGDLVLLSMEGFGTDR
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mRNA from alignment at P-wetherbeei_contig8003:176..307+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8003.1.1 ID=mRNA_P-wetherbeei_contig8003.1.1|Name=mRNA_P-wetherbeei_contig8003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=132bp|location=Sequence derived from alignment at P-wetherbeei_contig8003:176..307+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGATGACGACGGGAGGCCGCCGCCGCTGGCCGGCTACGGCGTCGG GCTGCCGCTTTCCCGCGTTTACGCACGCTACTTTGGTGGCGACCTGGTGC TGCTGTCCATGGAGGGCTTTGGTACCGACAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8003:176..307+

>mRNA_P-wetherbeei_contig8003.1.1 ID=mRNA_P-wetherbeei_contig8003.1.1|Name=mRNA_P-wetherbeei_contig8003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=132bp|location=Sequence derived from alignment at P-wetherbeei_contig8003:176..307+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGATGACGACGGGAGGCCGCCGCCGCTGGCCGGCTACGGCGTCGG
GCTGCCGCTTTCCCGCGTTTACGCACGCTACTTTGGTGGCGACCTGGTGC
TGCTGTCCATGGAGGGCTTTGGTACCGACAGG
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