mRNA_P-wetherbeei_contig80.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig80.2.1 vs. uniprot
Match: D8LFU2_ECTSI (Sec23_helical domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFU2_ECTSI) HSP 1 Score: 342 bits (876), Expect = 1.040e-101 Identity = 302/809 (37.33%), Postives = 389/809 (48.08%), Query Frame = 1
Query: 205 MQRYRAARAGDTLPELTQQVVEYELPLDSKGAMLQAGEFALNRGYLAKEPAADRPVVHLAVVDENGGAAYLAAVADALAAAAAALPPEARFALVLASDRVGLFDLAAPLPHVHFVDVRARAAAEAARGSADIAHPTD--------GPSVDLADVMLFEELACPVGPHRSEILAAVAALPQVCRGAEAAEXXXXXXXXXXXXXXXAVTRRCIGTALHLLLELIMESRGPPPAAV----TAPGDPAVPVGFSGGSARPATAVGGPAI--GVRRR-FTYAGVQIMLFLGGKPDGGAGXXXXXXXXXXXXXXXXXXXXXXTAPTEGSAAWAA--AERRSASFFRGQRKAAVAFARLAAAAATNGVSFDVHAVAAGTGEFFALSALRPLALLTGGRLHRHVLPTPRGAGDRRSAALAVALAAAAARPAAYDALLRAFCMDFEFSGGDSAGAD------DDGVAVVQVAFAYTAIIPDPDEEADDAQESNGGGGDRKRP-RLVTVRRLRVFTTESDMSADAAVVGAAVDVAATPASLLHKVAAEAMVSGFFEARSLLRDWLCNYCYALVS--AARHGGYVGAGARHPNEPGGADGPGLQSMAALLREDSCARLLRQVYGMLHSPLLRSDGVHPDERAALHSALGALDPAWLRLALYPSMQGFADENWRLATELPLSRETNGGAAAAFASGSGIFVIDALDRVVVYRPGMGKAAATDHARTGTSGXXXXXXXXXTPAAASGDA---WVPSASSSLGQFLAVRPGLCHVT-PEVVFCTAGDADEYFVQRALLEDDGL--GEMGAGFGDFVRLLVADV 2535
+ RYR R +LPELTQ+ VE+ELPLDSKGAM++ GE L GYLA+EPAA RP+V+LAVVDE+GG Y +A+ L LP + R +V SDRVGL DLAAPLPHV VD+ + P +V L++VM EEL CP+G +R I A V L CR AA R G A+ LLL L++ + P PA TA G G G R T+ G A GV F + G ++MLFLGG PD G G TEG + R+ F+RGQ A AA+ GVS DVH A T F LS+L PLA+ TGG ++RH L R G+ R+ +A + A +P L +F MDFEF G GA+ A VQ AFAYTA++PD + ++ A ++ GG+ R+VTVRRLRV T +D S VV A D A A L HKV +EA SGF EAR LLRDWL N+ L AA GG R PGG G++ AL+ + RQV+G+L SP+L DER +L S L +LDP L +ALYP MQG+A + RLA L LSR+ A+ A IFV+D RVVV+ + A A +G+A + PS S++GQ+L +R + + EVV+ G + +F + LLED L E F F +V DV
Sbjct: 8 LSRYRDRRTFRSLPELTQETVEFELPLDSKGAMMRNGEVLLENGYLAQEPAAARPLVYLAVVDESGGPEYHDVMAEVLDTCVQRLPDDCRLGVVTVSDRVGLVDLAAPLPHVQLVDLGSGTXXXXXXXXXTAGQPXXXXXSWTEPSSAVGLSEVMSLEELLCPIGGNRELISANVRGLRGACRDGGAAAAGRAGT-------------RVTGLAVKLLLNLLLGA-APGPAGAGATSTAGGGRDARDGRVGAPGRK-TSTGASAAERGVGGGGFPFPGCRLMLFLGGAPDRGPGALGVVSPNVAGGGKR-------NVETEGFVHHQLFPGKPRALGFYRGQ----------AYRAASCGVSVDVHCFANKTCGHFGLSSLAPLAMTTGGGVYRHSLLHQRE-GENRAVTVAREVCAELLQPRVLRRPLASFAMDFEFRGAGG-GAELQWXXXXXASATVQSAFAYTAVVPDANASSEAASDNAINGGEATNAARMVTVRRLRVSTVRTDSSPSVEVVATAADPATVAAVLAHKVVSEARRSGFAEARGLLRDWLANFISGLAESLAASEGG------RESAIPGGG---GVEQAQALMANPLIVGVARQVFGLLQSPVLHPTKGIADERVSLLSRLSSLDPESLSIALYPEMQGYATPDIRLANSLSLSRQAVTEASPACR----IFVVDTFWRVVVHYADSPASLAAGEA--------------------AGEAPLPFPPSRDSAIGQYLEMRRAVRPLAGQEVVYSRPGTPEAFFFEETLLEDRPLPRAEKAETFKGFFAEIVRDV 749
BLAST of mRNA_P-wetherbeei_contig80.2.1 vs. uniprot
Match: A0A835ZE54_9STRA (zf-Sec23_Sec24 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE54_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.820e-71 Identity = 302/942 (32.06%), Postives = 402/942 (42.68%), Query Frame = 1
Query: 1 AAVKDASGLPWACCITPFAGEHLPGPAV-------PIDQVARCATCYAYINPSCELAPRWWRCPLCGEHNAIK---PTM------QRYRAARAGDTLPELTQQVVEYELPLDSKGAMLQAGEFALNRGYLAKEPAADRPVVHLAVVDENGGAAYLAAVADALAAAAAALPPEARFALVLASDRVGLFDLAAPLPHVHFVDVRARAAAEAARGSADIAHPTDGPSVDLADVMLFEELACPVGPHRSEILAAVAALPQVCRGAEAAEXXXXXXXXXXXXXXXAVTRRCIGTALHLLLELIMESRGPPPAAVTAPGDPAVPVGFSGGSARPATAVGGPAIGVRRRFTYAGVQIMLFLGGKPDGGAGXXXXXXXXXXXXXXXXXXXXXXTAPTEGSAAWAAAERRSA-SFFRGQRK--AAVAFARLAAAAATNGVSFDVHAVAAGTGE-----------------------------------FFALSALRPLALLTGGRLHRHVLPTPRGAGDRRSAALA---VALAAAAARPAAYDALL--------RAFCMDFEFSGGDS--AGADDDGVA-VVQVAFAYTAIIPDPDEEADDAQESNGGGGDRKRPRLVTVRRLRVFTTESDMSADAAVVGAAVDVAATPASLLHKVAAEAMVSGFFEARSLLRDWLCNYCYALVSAARHGGYVGA--GARHPNEPGGADGPGLQSMAALLREDSCARLLRQVYGMLHSPLLRSDGVHP--------------DERAALHSALGALDPAWLRLALYPSMQGFA-DENWRLATELPLSRETNGGAAAAFASGSG-----IFVIDALDRVVVYRPGMGKAAATDHARTGTSGXXXXXXXXXTPAAASGDAWVPSASSSLGQFLAVRPGLCHVTPEVVFCTAGDADEYFVQRALLEDDGLGEMG-AGFGDFVRLLVADVDASLAG 2553
AAVKDASG+PW ITPF + A+ P D VARC+TC+AYINP C ++ RWWRC LCG H +++ PT+ +RYR +PEL QV++ ELP + E + Y A E ADRP V+LA+VDE GGAA+L+AV+ AL + LP F L+ SDRVG+FD+AAPLP V F D+ A A +AD + +VDLADV+ +LACPVG +R + A ALP VC G A+ RC G L +LEL++ RG AA AP D A P GF G F +AG + +FL G G G XXXXXXXX + A AA R A S + + A A +A A G H + A A +AL + TG R+ + G RRS++ + VA +A A P D+L R+ +DFEF G +G+D++ A VVQVAFAYT RRLRV T + S DA V +A A LL K SG EA +LL++W N C ++V AA + A A+ P S AA+ R+ + +L+ YG+LH + +D D AA L ALDPA LRL LYP M+ FA D + LA LPL R + + +S + V+DAL RV V+ A +P P +S LG +L+ R + V P V ++ + Q+ LL+D MG +GF DF+ +VA DA+LAG
Sbjct: 41 AAVKDASGIPWGVSITPFTQQQATDAAMDSASTPMPSDLVARCSTCFAYINPYCVVSRRWWRCSLCGAHVSLRHAQPTVATGSDPERYRQPHPLQKVPELIHQVLDLELPFGPQ-------ETSSLHQYAAAE--ADRPPVYLALVDETGGAAFLSAVSQALQRVVSTLPDHHCFGLITFSDRVGIFDVAAPLPLVRFADIGAAAT------TADPSLEPGSAAVDLADVVSVADLACPVGGNRESMQRAAEALPSVCSGG--------------LEYSAALRPRCTGAVLQRVLELLLGCRGAA-AASAAPPD-ATPTGFEDG------------------FEFAGCHVAVFLAGPVTAGIGSESQVLHTAAANEPXXXXXXXXXQRHYVALAAQAAPRGIAFSIWAAPQDDGADCGLADMAPLAMLTGGGLHHHPLTAEATHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYAALLRVRCSTGFRVRQR--------GSRRSSSSSGGSVANSALFADPQ-LDSLWHLARCPANRSVTLDFEFDGVGELLSGSDEEARAPVVQVAFAYTEACGXXXXXXXXXXXXXXXXXX-----XXXXRRLRVVTVKCAASHDALEVADGASASAIAACLLPKAVHTMRTSGAAEAAALLQEWAINLCCSIVEAAAADAHASAHHDAQQQQLP--------TSAAAVARDPTIHLILQLTYGLLH---VLADAAXXXXXXXXXXXXVQLSDAAAAALHQLSALDPAMLRLTLYPVMRAFAADMSTALAAGLPLRRSSADASGPNPSSNPNGRTPCVLVVDALTRVHVHYAAEALRRALP-----------------SP---------PPRASLLGAWLSNRAAMAGVPPVEVELSSAATSQLNFQKLLLDDCAPTGMGVSGFADFLAQVVAGADAALAG 882
BLAST of mRNA_P-wetherbeei_contig80.2.1 vs. uniprot
Match: A0A8J5XK30_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XK30_DIALT) HSP 1 Score: 92.8 bits (229), Expect = 1.660e-15 Identity = 68/195 (34.87%), Postives = 93/195 (47.69%), Query Frame = 1
Query: 1 AAVKDASGLPWACCITPFA----GEHLPGPAVPIDQVARCATCYAYINPSCELAPRWWRCPLCGEHNAIKPTMQRYRAARAGDTLPELTQQVVEYEL-PLDSK----------GAMLQAGEFALNRGYLAKEPAADRPVVHLAVVDENGGAAYLAAVADALAAAAAALPPEARFALVLASDRVGLFDLAAPLPHV 540
AA+K+ GLPW +TPFA G P + VARC++CYAYIN C + W C LC N + RY A+ LPEL+ + EL P D+ + G L+ +RP+ +A+VD +G + ++ V ALAAA L P F LV AS +G+F L +P PHV
Sbjct: 14 AALKEDCGLPWGVSVTPFAQAEAGAFDASRLAPANVVARCSSCYAYINSYCHFMRKAWICALCATTNELP---HRYGASVCRRELPELSSSAYQIELEPEDAPTXXXXXXXXXXXXXXXXXXSAAAGALSTADVRERPIC-IALVDTSGSSDFVEMVRIALAAALRGLAPCTLFGLVSASSSLGVFLLRSPKPHV 204
BLAST of mRNA_P-wetherbeei_contig80.2.1 vs. uniprot
Match: A0A7S0GSL4_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GSL4_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 6.090e-14 Identity = 65/196 (33.16%), Postives = 91/196 (46.43%), Query Frame = 1
Query: 7 VKDASGLPWACCITPFA-------------GEHLPGPAVPIDQVARCATCYAYINPSCELAPRWWRCPLCGEHNAIKPTMQRYRAARAGDTLPELTQQVVEYELPLDSKGAMLQAGEFALNRGYLAKEPAADRPVVHLAVVDENGGAAYLAAVADALAAAAAALPPEARFALVLASDRVGLFDLAAPLPHVHFVDV 555
VK SG+PW C + PFA G L +V VARC TCYAYINP + + WRCPLC N+ +RYR D LPEL+ +E+ L S E + G + P +++ VVD GG + V ++ + LP A ALV S ++G++D+ + PHV F +
Sbjct: 16 VKRKSGIPWGCLVKPFAVGDGAAEESKETGGRTLT--SVRASAVARCGTCYAYINPFVKWSWNSWRCPLCRTWNSCG---RRYRDRNDND-LPELSFSDIEF---LVSTTTPYPNAETTTS-GLTLRHP------IYIFVVDVTGGEKAVETVKKSILQSLDHLPTHAWMALVTVSHKIGVYDMRSASPHVRFTHI 195
BLAST of mRNA_P-wetherbeei_contig80.2.1 vs. uniprot
Match: A0A7S3H238_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H238_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.110e-7 Identity = 47/146 (32.19%), Postives = 66/146 (45.21%), Query Frame = 1
Query: 91 DQVARCAT--CYAYINPSCELAPRWWRCPLCGEHNAIKPTMQRYRAARAGDTLPELTQQVVEYE---LPLDSKGAMLQAGEFALNRGYLAKEPAADRPVVHLAVVDENGGAAYLAAVADALAAAAAALPPEARFALVLASDRVGLF 513
+VARC+ C Y+NP C+ W C LCG N I RYR LPEL +V+Y LP Q + + A RP++H+ VV E+ L + +AL AA L PE + L+ S R+G++
Sbjct: 73 SRVARCSNSNCTGYMNPFCDTTNARWFCSLCGYKNGIGKQQHRYRHIDL-KLLPELQDPLVDYRASLLPTTQPSRQSQQDQAVYSVSV------AQRPLLHVFVVQESMQLDALQSTVEALTAALTDLHPEIQIILLTFSHRIGIY 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig80.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig80.2.1 >prot_P-wetherbeei_contig80.2.1 ID=prot_P-wetherbeei_contig80.2.1|Name=mRNA_P-wetherbeei_contig80.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=855bp AAVKDASGLPWACCITPFAGEHLPGPAVPIDQVARCATCYAYINPSCELAback to top mRNA from alignment at P-wetherbeei_contig80:55..3470+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig80.2.1 ID=mRNA_P-wetherbeei_contig80.2.1|Name=mRNA_P-wetherbeei_contig80.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3416bp|location=Sequence derived from alignment at P-wetherbeei_contig80:55..3470+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig80:55..3470+ >mRNA_P-wetherbeei_contig80.2.1 ID=mRNA_P-wetherbeei_contig80.2.1|Name=mRNA_P-wetherbeei_contig80.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2565bp|location=Sequence derived from alignment at P-wetherbeei_contig80:55..3470+ (Phaeothamnion wetherbeei SAG_119_79)back to top |