mRNA_P-wetherbeei_contig7998.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Match: A0A6H5KN31_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN31_9PHAE) HSP 1 Score: 327 bits (837), Expect = 3.080e-107 Identity = 148/279 (53.05%), Postives = 194/279 (69.53%), Query Frame = 1
Query: 25 GGWKACRIVKEKDFKSVRRLSEPGGDRALKPITPRPGVSWTLEISENKTAAWLGLHRWDDRYEYGSATADAAAAELGYCRVHMPSVPRSGSTWWRELFEMATGRPTAAMWPEGGKFSERYQAFLPDDPCGSEPNVMEGKKSNGKSYPCRNLVMPDRSEPILFKSHTPYWPSFDRPQLLPDKTCMLVILVRNPLDNLDAFNRYVAKKARINLRTFLPQWAGHINHWLAAFPDTPVYVFRYEDILRDASAALRDALAALPGRWRRDEGSIAAAVEAYGPKQ 861
G W CR KE + ++ +PG D+ L P+ PRP W LE+SE++ A WLGLH +D+ YEYGS AD + GYCRVHMPS+PR+GSTW+R LFE AT +P+ +MWPEGG ERY AF DDPCG+ + MEG + +PCR+L P+ + PIL+KSHTP++PS+++P L+P+ TCMLV+LVRNP+DN DA+ RY+A KA LR +LP W GH++HW+AA D P+YVFRYED+L A LR L LPG W E SIA A+ +GPK+
Sbjct: 110 GEWITCRAYKEAELGPDKKQEQPGFDKYLHPVAPRPKAGWELEMSESQDAEWLGLHSFDNMYEYGSEEADRRVEKAGYCRVHMPSIPRTGSTWFRALFETATSQPSFSMWPEGGTLKERYTAFSSDDPCGASLDHMEGNLRSKAKFPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEDTCMLVLLVRNPIDNHDAWQRYMAGKAPC-LRDYLPVWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILNTLPGGWNWSEESIARAMSLFGPKK 387
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Match: D8LQP3_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP3_ECTSI) HSP 1 Score: 317 bits (813), Expect = 1.570e-103 Identity = 141/276 (51.09%), Postives = 195/276 (70.65%), Query Frame = 1
Query: 31 WKACRIVKEKDFKSVRRLSEPGGDRALKPITPRPGVSWTLEISENKTAAWLGLHRWDDRYEYGSATADAAAAELGYCRVHMPSVPRSGSTWWRELFEMATGRPTAAMWPEGGKFSERYQAFLPDDPCGSEPNVMEGKKSNGKSYPCRNLVMPDRSEPILFKSHTPYWPSFDRPQLLPDKTCMLVILVRNPLDNLDAFNRYVAKKARINLRTFLPQWAGHINHWLAAFPDTPVYVFRYEDILRDASAALRDALAALPGRWRRDEGSIAAAVEAYGPK 858
W+ CR +E + + ++ G D L+ + P P W L+++E++ A WLGLH +D R+EYGS AD +LGYCRVHMPSVPR+GSTW+R +FE AT +P+ +MW EGG F E Y+AF DDPCG+ + MEG+ + K + CR+L P+ + PIL+KSHTP++PS+++P L+P++TCMLV+LVRNP+DN DA+ RY+ KK+ I +R +LP W GH++HW+AA D P+YVFRYED+L A LR L ALPG W E SIA A+ +GPK
Sbjct: 118 WRTCRAYEEAELAQHKNKNQLGHDEFLRRVPPNPQAKWELQMTEDQDAEWLGLHNFDSRFEYGSKKADERVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFSMWQEGGTFKEHYRAFSSDDPCGASLDHMEGRLQSQKKFACRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWQRYMYKKS-IVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPGGWNWSEDSIAKAMRLFGPK 392
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Match: A0A6H5KVH5_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH5_9PHAE) HSP 1 Score: 310 bits (793), Expect = 1.590e-100 Identity = 139/270 (51.48%), Postives = 190/270 (70.37%), Query Frame = 1
Query: 31 WKACRIVKEKDFKSVRRLSEPGGDRALKPITPRPGVSWTLEISENKTAAWLGLHRWDDRYEYGSATADAAAAELGYCRVHMPSVPRSGSTWWRELFEMATGRPTAAMWPEGGKFSERYQAFLPDDPCGSEPNVMEGKKSNGKSYPCRNLVMPDRSEPILFKSHTPYWPSFDRPQLLPDKTCMLVILVRNPLDNLDAFNRYVAKKARINLRTFLPQWAGHINHWLAAFPDTPVYVFRYEDILRDASAALRDALAALPGRWRRDEGSIAAAV 840
W+ CR +E + + ++ G D LK + P P W LE++EN+ A WLGLH +D R++YGS AD +LGYCRVHMPSVPR+GSTW+R +FE AT +P+ +MW EGG F E Y+AF DDPCG+ + MEG+ + K + CR+L P+ + PIL+KSHTP++PS+++P L+P++TCMLV+LVRNP+DN DA+ RY+ K+ I +R +LP W GH++HW+AA D P+YVFRYED+L A LR L ALPG W E SIA A+
Sbjct: 118 WRTCRAYEEAELAQHKNKNQLGYDEFLKRVPPNPQAKWELEMTENQDAEWLGLHNFDSRFKYGSKKADERVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFSMWQEGGTFKENYRAFSSDDPCGASLDHMEGRLQSMKKFACRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWQRYMYHKS-IVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPGGWNWSEDSIAKAM 386
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Match: D8LQP4_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP4_ECTSI) HSP 1 Score: 324 bits (831), Expect = 1.400e-99 Identity = 147/272 (54.04%), Postives = 192/272 (70.59%), Query Frame = 1
Query: 25 GGWKACRIVKEKDFKSVRRLSEPGGDRALKPITPRPGVSWTLEISENKTAAWLGLHRWDDRYEYGSATADAAAAELGYCRVHMPSVPRSGSTWWRELFEMATGRPTAAMWPEGGKFSERYQAFLPDDPCGSEPNVMEGKKSNGKSYPCRNLVMPDRSEPILFKSHTPYWPSFDRPQLLPDKTCMLVILVRNPLDNLDAFNRYVAKKARINLRTFLPQWAGHINHWLAAFPDTPVYVFRYEDILRDASAALRDALAALPGRWRRDEGSIAAAV 840
G W CR KE + ++ +PG D+ L+P+ PRP W LE+SE++ A WLGLH +DDRYEYGS AD + GYCRVHMPS+PR+GSTW+R LFE AT +P+ +MWPEGG ERY AF DDPCG+ + MEG + +PCR+L P+ + PIL+KSHTP++PS+++P L+P+ TCMLV+LVRNP+DN DA+ RY+A KA+ LR +LP W GH++HW+AA D P+YVFRYED+L A LR L LPG W E SIA A+
Sbjct: 845 GEWITCREYKEAELGPDKKQDKPGFDKFLQPVAPRPEAGWELEMSESQDAEWLGLHSFDDRYEYGSEEADRRVEKAGYCRVHMPSIPRTGSTWFRALFETATSQPSFSMWPEGGTLKERYNAFSSDDPCGASLDHMEGNLRSEAKFPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEDTCMLVLLVRNPIDNHDAWQRYMAGKAQC-LRDYLPVWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILNTLPGGWNWSEESIARAM 1115
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Match: A0A835YVS2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS2_9STRA) HSP 1 Score: 258 bits (660), Expect = 3.560e-82 Identity = 124/255 (48.63%), Postives = 160/255 (62.75%), Query Frame = 1
Query: 100 DRALKPITPRPGVSWTLEISENKTAAWLGLHRWDDRYEYGSATADAAAAELGYCRVHMPSVPRSGSTWWRELFEMATGRPTAAMWPEGGKFSERYQAFLPDD-PCGSEPNVMEGKKSNGKSYPCRNLVMPDRSEPILFKSHTPYWPSFDRPQLLPDKTCMLVILVRNPLDNLDAFNRYVAKKARINLRTFLPQWAGHINHWLAAFPDTPVYVFRYEDILRDASAALRDALAALPGRWRRDEGSIAAAVEAYGPKQ 861
D+AL P+ P PG +W L +S++ WLG+ D RY YGS AD GYCRVHMPS+PR+GSTW+R +FE+ATGRPTA++WPEGG+ + + D CG+ P MEG K + PCRNL P +P+L KSHTP++PS+DRP L P TC ++++VRNPLD DA+ RY A LR +LP WAGH+ HW+A D P+ FRYED+L A L L AL W SI AV YGP++
Sbjct: 3 DKALPPVKPTPGAAWRLTVSDSMEGNWLGVRNLDRRYVYGSKLADQRYRANGYCRVHMPSIPRAGSTWFRTMFEVATGRPTASVWPEGGRQDAARRYHIVDGHACGANPAQMEGNKLPRGAPPCRNLTAPAPDDPVLMKSHTPFFPSYDRPALDPGATCAVLLIVRNPLDAHDAWRRYAGGTAE-PLRKWLPVWAGHLTHWVADTRDLPIIAFRYEDLLWRADKVLEQVLRALGPGWEWSRESIERAVRTYGPRE 256
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Match: A9VD83_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VD83_MONBE) HSP 1 Score: 65.5 bits (158), Expect = 2.030e-8 Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 1
Query: 262 RVHMPSVPRSGSTWWRELFEMATGRPTAAMWPEGGKFSERYQAFLPDDPCGSEPNVMEGKKSN---------GKSYPCRNLVMPDRSEPILFKSHTPY-----WPSFDRPQLLPDKTCML--VILVRNPLDNLDAFNRYVAKKARIN------LRTFLPQWAGHINHWLAAFPDT--PVYVFRYEDILRD 759
R+ M S+PRSG++W R++ E+ T R T ++PE ++AF +D SE S G + C ++ S+ I+ K+H+P+ + L D + ++ VRNPLDN DA++R++ K R L F+ W G W P + P Y+FR+ED+ D
Sbjct: 101 RIVMASIPRSGNSWSRDMIELVTKRATETVFPE------TFRAF--EDGPNSERETYSATWSEASDLYRHECGHVHDCSHIK--PGSDFIVAKTHSPFILTHGGAAGTHGTNLSDAGVGVFNILPVRNPLDNWDAWHRWLVGKGRNEQLAEWPLDRFVEHWLGFHRLWQDTLPYSAQPRYIFRFEDLASD 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7998.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7998.1.1 >prot_P-wetherbeei_contig7998.1.1 ID=prot_P-wetherbeei_contig7998.1.1|Name=mRNA_P-wetherbeei_contig7998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp MDPTIAIDGGWKACRIVKEKDFKSVRRLSEPGGDRALKPITPRPGVSWTLback to top mRNA from alignment at P-wetherbeei_contig7998:2..1978- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7998.1.1 ID=mRNA_P-wetherbeei_contig7998.1.1|Name=mRNA_P-wetherbeei_contig7998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1977bp|location=Sequence derived from alignment at P-wetherbeei_contig7998:2..1978- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7998:2..1978- >mRNA_P-wetherbeei_contig7998.1.1 ID=mRNA_P-wetherbeei_contig7998.1.1|Name=mRNA_P-wetherbeei_contig7998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig7998:2..1978- (Phaeothamnion wetherbeei SAG_119_79)back to top |