prot_P-wetherbeei_contig7997.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7997.1.1
Unique Nameprot_P-wetherbeei_contig7997.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length60
Homology
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BLAST of mRNA_P-wetherbeei_contig7997.1.1 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.180e-11
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0 
Query:    4 VLSDAGLRTLLMDPELQAVLQDCGRPGRLAYYMTQRPDIAAKIRRLADAGLVQLQ 58
            +L+D GLR LL+DP +Q VLQ+C  PGRL +Y    P+   KIRRLA AGLVQ+Q
Sbjct:  154 ILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAH-PEWGPKIRRLAQAGLVQIQ 207
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BLAST of mRNA_P-wetherbeei_contig7997.1.1 vs. uniprot
Match: A0A7S2C8H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C8H1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.140e-9
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 0 
Query:    1 MDAVLSDAGLRTLLMDPELQAVLQDCGRPGRLAYYMTQRPDIAAKIRRLADAGLVQLQ 58
            +D V+ +  LR LLMD E+Q ++Q CG PG L +YMT  P    K+R+LADAGLV+++
Sbjct:  202 VDLVMRNQELRELLMDREMQEIMQKCGHPGALQHYMTD-PTWGPKLRKLADAGLVRIE 258
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BLAST of mRNA_P-wetherbeei_contig7997.1.1 vs. uniprot
Match: A0A7S2PYS5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PYS5_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 4.440e-5
Identity = 23/58 (39.66%), Postives = 39/58 (67.24%), Query Frame = 0 
Query:    4 VLSDAGLRTLLMDPELQAVLQDC----GRPGRLAYYMTQRPDIAAKIRRLADAGLVQL 57
            +LS+  LR++L+DP++Q V+++C    G  G+L YYM    D   K+R L +AGL+++
Sbjct:   55 ILSNDALRSILLDPKMQQVMEECASDGGGAGKLRYYM-MHDDFGPKLRVLMNAGLLKV 111
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7997.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z085_9STRA1.180e-1158.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C8H1_9STRA1.140e-950.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2PYS5_9STRA4.440e-539.66Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.260.100coord: 1..58
e-value: 6.9E-9
score: 37.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7997contigP-wetherbeei_contig7997:2531..2710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7997.1.1mRNA_P-wetherbeei_contig7997.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7997 2531..2731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7997.1.1 ID=prot_P-wetherbeei_contig7997.1.1|Name=mRNA_P-wetherbeei_contig7997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp
MDAVLSDAGLRTLLMDPELQAVLQDCGRPGRLAYYMTQRPDIAAKIRRLA
DAGLVQLQS*
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