mRNA_P-wetherbeei_contig12928.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A127EV64_9HYPH (RDD domain-containing protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EV64_9HYPH) HSP 1 Score: 278 bits (711), Expect = 1.900e-93 Identity = 132/178 (74.16%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALRGSRRP 534
M+ EPKRIGVS E+KPHAYDP+TNPELFEGV+ARR+VAFLIDF+ILS+PVVF++MFIFV+G+VT GLGF YGLLWP MV+WA+ YYG+TLG SAT+GMR+MD+EMRTWYG+PAYFVLGAVHA+VFWIT+S +TP VL+V FNERRR LHD LVGT+VINN ER++ALR RP
Sbjct: 1 MAASEPKRIGVSFEVKPHAYDPVTNPELFEGVVARRIVAFLIDFLILSLPVVFVSMFIFVIGIVTFGLGFFLYGLLWPGMVVWAIVYYGMTLGSASSATIGMRIMDIEMRTWYGAPAYFVLGAVHAVVFWITISAITPLVLVVCLFNERRRCLHDFLVGTIVINNVERAAALRTLHRP 178
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A537NR43_9PROT (RDD family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NR43_9PROT) HSP 1 Score: 257 bits (657), Expect = 2.970e-85 Identity = 123/173 (71.10%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALR 519
MS P+ IGVSIELKPHAYDP+ NPELFEGVLARR +AFLID I+S+PV+F A FI ++G VT GLG++ Y LLWPA VIWA++YYG+T GG SAT+GMR+MDLEMRTWYG+P YFVLGAVHA+V+W+TVS LTPF+LLVAFFNER+R LHD+LVGTVVIN ++R+ LR
Sbjct: 1 MSDSRPRNIGVSIELKPHAYDPVVNPELFEGVLARRCMAFLIDITIISIPVLFAAFFILILGFVTFGLGWVLYALLWPAAVIWAISYYGLTFGGAASATIGMRVMDLEMRTWYGAPCYFVLGAVHAVVYWVTVSFLTPFILLVAFFNERKRLLHDMLVGTVVINKSDRAQGLR 173
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A537PJY6_9PROT (RDD family protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PJY6_9PROT) HSP 1 Score: 257 bits (656), Expect = 4.830e-85 Identity = 124/178 (69.66%), Postives = 152/178 (85.39%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALRGSRRP 534
MS G P++IG+SIE+KPHAYDPI NPELFEGVLARR +AF+ID +I++VPV+F A FIF+VG+VTLGLG++ Y LL P VIWA+ YYG+T G P SAT+GMR+MD+EMRTWYG+PAYFVLGAVHA+V+W+T+S LTP +LLVAFFN RRR LHD+LVGTVVIN R+ ALR + RP
Sbjct: 1 MSDGGPRKIGLSIEVKPHAYDPIANPELFEGVLARRCIAFVIDVIIIAVPVLFAAAFIFIVGLVTLGLGWILYWLLSPTAVIWAICYYGLTFGSPASATIGMRVMDIEMRTWYGAPAYFVLGAVHAVVYWVTISFLTPLILLVAFFNARRRLLHDLLVGTVVINTGARAQALRRTSRP 178
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A1Q7BR45_9PROT (RDD family protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BR45_9PROT) HSP 1 Score: 253 bits (645), Expect = 2.360e-83 Identity = 122/177 (68.93%), Postives = 151/177 (85.31%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALRGSRR 531
MS G P++IGVS+E+KPHAYDP+ NPELFEGVLARR +AF+ID VI+++PVVF A FIF+VG+VTLGLG+ Y +L PA VIWA+ YYG+T G P SAT+GMR+MD+EMRTWYG+PAYFVLGAVHAIV+WIT+S LTP +LLVA FN+RRR LHD+LVGT+VIN+ R+ LR + R
Sbjct: 1 MSDGGPRKIGVSVEVKPHAYDPVANPELFEGVLARRCIAFVIDVVIIAIPVVFAAAFIFIVGLVTLGLGWFLYWILSPATVIWAICYYGLTFGSPASATIGMRVMDIEMRTWYGAPAYFVLGAVHAIVYWITISFLTPLILLVALFNQRRRLLHDMLVGTIVINSRARAEVLRRAPR 177
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A1W6ZVZ2_9HYPH (RDD family protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZVZ2_9HYPH) HSP 1 Score: 247 bits (631), Expect = 2.520e-81 Identity = 124/174 (71.26%), Postives = 146/174 (83.91%), Query Frame = 1
Query: 7 TGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALRGSR 528
T + +R+GVS +LKPHAYDP TNPELF+GV ARRV+AFLID +IL++P+V LA+F F VG+VTLG GF+ +GL+ V+WAL YYG TLGGPRSATLGMR MD+EMRTWYGSPAYFVLGAVHAIVFW+TVS+LTP +LLV FFN R R LHD LVGTVVINN R+ ALR +R
Sbjct: 2 TDDQQRLGVSNDLKPHAYDPETNPELFDGVPARRVIAFLIDLIILAIPLVVLALFFFAVGIVTLGFGFVLFGLMPAIAVVWALFYYGATLGGPRSATLGMRTMDIEMRTWYGSPAYFVLGAVHAIVFWVTVSVLTPLILLVCFFNARGRLLHDFLVGTVVINNPARAGALRPTR 175
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A1Q7BD40_9PROT (RDD family protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BD40_9PROT) HSP 1 Score: 247 bits (631), Expect = 2.700e-81 Identity = 122/177 (68.93%), Postives = 149/177 (84.18%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALRGSRR 531
M+ G P++IGVSIE+KPHAYDPI N ELFEGVLARR +AF+ID VI+++PV+F A+FIF+ G+VTLGLG++ Y LL PA VIWA+ YYG+T G P SAT+GMR MD+EMRTWYG+PAYFVLGAVHAI +W TVS LTP +LLVA FN+RRR LHD+LVGT+VINN R+ ALR + R
Sbjct: 1 MTEGGPRKIGVSIEVKPHAYDPIANSELFEGVLARRCIAFVIDVVIIAIPVLFAAVFIFIFGLVTLGLGWVLYWLLSPAAVIWAICYYGLTFGSPASATIGMRAMDIEMRTWYGAPAYFVLGAVHAIAYWFTVSFLTPLILLVALFNDRRRLLHDMLVGTIVINNRLRADALRRAPR 177
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A345ZTL2_9HYPH (RDD family protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZTL2_9HYPH) HSP 1 Score: 246 bits (629), Expect = 4.600e-81 Identity = 120/161 (74.53%), Postives = 145/161 (90.06%), Query Frame = 1
Query: 37 IELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALR 519
I++KPHAYDPI NPELFEGVLARR+VAF+IDFV++++PVV AMFIF G+VTLGLGF Y LL PA V+WAL Y+G TLG PRSAT+GMR+M+LEMRTWYG+PAYFVLGAVHAIVFW+++S LTPF+LLVAFFN+RRR LHDI++GTVVINN+ER++ LR
Sbjct: 3 IDIKPHAYDPIRNPELFEGVLARRIVAFVIDFVLIAIPVVLAAMFIFAFGLVTLGLGFALYWLLPPATVVWALIYFGATLGSPRSATIGMRVMNLEMRTWYGAPAYFVLGAVHAIVFWVSISALTPFILLVAFFNDRRRLLHDIVLGTVVINNSERAAMLR 163
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A363TMG7_9BRAD (RDD family protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TMG7_9BRAD) HSP 1 Score: 246 bits (628), Expect = 9.450e-81 Identity = 121/173 (69.94%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALR 519
M+ EPKRIGVS E+KPH YDP T PELFEGV+ARRV+AF+ID ++++VP+VFLA+FIFV G+VTLGLG+L + L P VIWA+ YYG+TLG P SATLGMR+M++EMRTWYG P YF+LGAVHAI+FW+TVS LTP +LLVAFFN RRR LHD+L+GTVVINN R++ALR
Sbjct: 1 MAESEPKRIGVSFEVKPHVYDPDTQPELFEGVMARRVLAFVIDLLVITVPLVFLAIFIFVFGIVTLGLGWLLFFLFSPIAVIWAVLYYGLTLGSPASATLGMRVMEIEMRTWYGGPCYFLLGAVHAILFWVTVSFLTPLILLVAFFNARRRLLHDLLLGTVVINNELRAAALR 173
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A537LEF3_9PROT (RDD family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537LEF3_9PROT) HSP 1 Score: 242 bits (618), Expect = 2.750e-79 Identity = 121/178 (67.98%), Postives = 145/178 (81.46%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALRGSRRP 534
MS PKR G+S+E+K HAYDP PELFEGV ARRVVAFLID V+++VP++F+A+FIF+ G+VTLGLG+ + L P VIWAL YYG+T G P SAT+GMRM+DLEMRTWYG P YFVLGAVHAI FW+T+S LTPFVLLVA FN+RRR LHD+LVGTVVINNA R++ LR + P
Sbjct: 1 MSDSGPKRTGLSVEVKAHAYDPAVQPELFEGVPARRVVAFLIDVVVIAVPLIFVAIFIFMFGLVTLGLGWFLFFLYGPITVIWALVYYGLTFGSPASATIGMRMVDLEMRTWYGEPCYFVLGAVHAIAFWLTLSFLTPFVLLVALFNDRRRLLHDMLVGTVVINNATRANTLRNASGP 178
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Match: A0A537PLP1_9PROT (RDD family protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PLP1_9PROT) HSP 1 Score: 242 bits (618), Expect = 2.840e-79 Identity = 121/173 (69.94%), Postives = 143/173 (82.66%), Query Frame = 1
Query: 1 MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPVVFLAMFIFVVGVVTLGLGFLFYGLLWPAMVIWALAYYGITLGGPRSATLGMRMMDLEMRTWYGSPAYFVLGAVHAIVFWITVSMLTPFVLLVAFFNERRRGLHDILVGTVVINNAERSSALR 519
M +PKR+GVS E+KPHAYDP T+PELFEGVLARRV+AF ID ++++PVVF +FIFV G+VT GLG+ Y LL PA VIWAL +YG T G P SAT+GMR+MDLEMRTWYG+P YF+LGAVHAIVFWITVS LTP +LLV FN+RRR LHD+LVGTVVINN R++ALR
Sbjct: 1 MPDSDPKRVGVSFEVKPHAYDPATSPELFEGVLARRVLAFFIDVFLIAIPVVFAGLFIFVFGLVTFGLGWALYWLLSPAAVIWALVHYGTTFGSPASATIGMRVMDLEMRTWYGAPMYFLLGAVHAIVFWITVSALTPLILLVGLFNDRRRLLHDMLVGTVVINNEVRANALR 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12928.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12928.1.1 >prot_P-wetherbeei_contig12928.1.1 ID=prot_P-wetherbeei_contig12928.1.1|Name=mRNA_P-wetherbeei_contig12928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp MSTGEPKRIGVSIELKPHAYDPITNPELFEGVLARRVVAFLIDFVILSVPback to top mRNA from alignment at P-wetherbeei_contig12928:673..1212+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12928.1.1 ID=mRNA_P-wetherbeei_contig12928.1.1|Name=mRNA_P-wetherbeei_contig12928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig12928:673..1212+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12928:673..1212+ >mRNA_P-wetherbeei_contig12928.1.1 ID=mRNA_P-wetherbeei_contig12928.1.1|Name=mRNA_P-wetherbeei_contig12928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig12928:673..1212+ (Phaeothamnion wetherbeei SAG_119_79)back to top |