mRNA_P-wetherbeei_contig7994.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7994.1.1
Unique NamemRNA_P-wetherbeei_contig7994.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A6H5KFS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS4_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 1.460e-101
Identity = 153/238 (64.29%), Postives = 190/238 (79.83%), Query Frame = 1
Query:   55 YGHVFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYVDKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            Y HVF +IE H L+  V + V QL++L RE  GELLLR+ +K  V+SVV QL   GRRDLQHWYL LLF ++PEMY A EYA +HA QVSL AEFAPPF  GR P Y S FL FLR + +APLE AL EC +RRPPLYDEM +ILG++G TRRAL ILLE +G+V RAIEFVE+HDK+LWY+LI++SL++E FL+GLLDHAGVY+VD+ARL++E+P+G+ I GLR K++KI+SDY FQ
Sbjct:   80 YSHVFRMIEQHSLFDAVQDRVLQLIRLDRELTGELLLRHPEKFSVSSVVAQLN--GRRDLQHWYLGLLFDRSPEMYGAQEYAPYHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQ 315          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 7.580e-99
Identity = 155/238 (65.13%), Postives = 192/238 (80.67%), Query Frame = 1
Query:   55 YGHVFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYVDKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            YGHVF +IE H L+  V + V QL++L RE  GELLLR+ +K  V+SVV QL+  GRRDLQHWYL LLF ++PEMY A EYA FHA QVSL AEFAPPF  GR P Y S FL FLR + +APLE AL EC +RRPPLYDEM +ILG++G TRRAL ILLE +G+V RAIEFVE+HDK+LWY+LI++SL++E FL+GLLDHAGVY+VD+ARL++E+P+G+ I GLR K++KI+SDY FQ
Sbjct:  658 YGHVFRMIEQHSLFDAVQDRVLQLIRLDRELTGELLLRHPEKFSVSSVVSQLK--GRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQ 893          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 244 bits (622), Expect = 3.490e-70
Identity = 140/254 (55.12%), Postives = 163/254 (64.17%), Query Frame = 1
Query:   91 LWAQVSESVPQLVQLSRERAGELLLRYVDKLPVASVVGQLRAAGRRDL------------QHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVY----------------------------------NVDIARLISEVPEGIR 714
            L A V   V +L+QLS+  AG LL+R+VDKLP A VV QLR  GRRDL            QHWYLHLLF QAPE+YN PE+A FHA QVSL+A+FAPPF   R PPYDSDFL FLRGS++APLE ALTECE+RRPPL+DEMV           AL++LLE +   +RAIEFV +HDK+LWY+LIDYSLRNE FL GLLDHAGVY                                  +VD+A LI  VPEG+R
Sbjct: 1070 LRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLR--GRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMR 1310          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.180e-58
Identity = 122/296 (41.22%), Postives = 164/296 (55.41%), Query Frame = 1
Query:   64 VFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYVDKLPVASVVGQLRA----------------AGRRDLQH---------WYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAG-----------------------------------RSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIAR-LISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            VF +IE H  +   +E V  LV++ R +A +LL+RYVD+LPVASVV QL+                 AG     H         WYL LLF + P+ YN PE+A FH  QV L+A  APPF                                        P Y SD L+FL  S++  LE AL  CERR+PPLYDE+V+IL ++G  + AL +LL  I +V+RAIEFV+ HDK LW +L  +SL++  FL GLL HAG YNVD+AR L+ ++P+ +RI GL+ KL+ I++ Y F+
Sbjct:  848 VFSMIEEHNFFDAAAERVSLLVKMDRSKAADLLVRYVDRLPVASVVRQLQLEERGGEGEGAVPSTALAGHPQSSHASASPSLVLWYLDLLFRRLPDHYNHPEFAQFHVLQVELYAAAAPPFCPAPERSHTNAKDEDTVKIKDSGAHGSGENASDEEDGVAEPAYTSDLLSFLMWSNHVRLETALAACERRQPPLYDEIVYILSRIGHNKEALRLLLVEIRSVRRAIEFVDRHDKGLWRELTAHSLQHPRFLAGLLRHAGNYNVDLARSLVEDIPDAMRIRGLQPKLLNIVASYRFE 1143          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: F0XVF2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF2_AURAN)

HSP 1 Score: 183 bits (465), Expect = 3.880e-49
Identity = 99/235 (42.13%), Postives = 140/235 (59.57%), Query Frame = 1
Query:   64 VFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYVDKLPVASVVGQL-RAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAP-PFVAGRSP--PYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSD 756
            VF L+E   L+  V + V  L   S ERA +LL+++VD+ P+  V  QL R       + WYL   FA+ P++Y + ++   H     L+A   P P  A   P   YDS+ L FLR SS+ PL  A   C  +  PLYDEMV++LGK G T  AL +LL++IG+V+RA+ FVE+HD+ LW  LI ++LR+  FL  LLD AG  ++D+  L+ ++PEG R+ GLR KL  +  D
Sbjct:  592 VFDLVEAQRLYEDVRDRVATLRAFSEERAADLLVKHVDEFPLGDVDDQLAREEDGGAARLWYLRTCFARLPDLYASADHRARHGDHARLYARLGPVPDAASAGPRADYDSEMLRFLRWSSFVPLTEAYDACAAQEAPLYDEMVWVLGKTGKTAEALALLLDKIGSVKRAVRFVEAHDRSLWSTLIRHALRDARFLGELLDDAGSSSLDVGALLHQIPEGTRVPGLRDKLANVFQD 826          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A7S2CJP2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJP2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.670e-47
Identity = 103/229 (44.98%), Postives = 146/229 (63.76%), Query Frame = 1
Query:  154 ELLLRYVDKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPP--FVAGRSPPYDSDFLA---------------FLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVE--SHD----KELWYQLIDYSLRNEAFLTGLLDHAGVYNVDI-ARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            +LLL+ +D++P+ SV  QL+      L  WY+HLLF +  + YN  EYA +H +QV L+A FA    F+   SP   S  LA               FL+ S  A  + AL +C+R++PPLY EMVFIL K G    AL +LLE++ +V+RAI+FVE  SH+    KELW QLI YSL+++ FLTG+LD+AG+Y++++ +RLI E+P  ++I GL+ KLI I+ DY FQ
Sbjct:    1 DLLLKALDEIPIVSVERQLQNTPVDLL--WYVHLLFTRDIKHYNTKEYADYHRRQVELYAVFAGSRAFLDPVSPASASSGLAQEGSAEEEDKSSMIQFLKWSVNASFDFALEQCQRQKPPLYTEMVFILDKKGQCDTALTLLLEKVRDVRRAIQFVEKDSHEADVSKELWDQLIKYSLKHKEFLTGMLDYAGLYSIELPSRLIREIPVDLKIKGLKQKLINIVEDYRFQ 227          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A485LHE2_9STRA (Aste57867_21416 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHE2_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.120e-46
Identity = 93/238 (39.08%), Postives = 148/238 (62.18%), Query Frame = 1
Query:   61 HVFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYV--DKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            H F LI  H LWA +   V  L+ + RE A  +L+  +  D+L V+++V QL    +R+L H YLH LF      YN   YA  H  QVSL+AEFAP ++           L FL+ S++ PLE A   C  R PPL+D M+FILG++G  ++AL+ ++ ++ NV++AI+FV+ +D ELW  LI+ SL N+ ++  LL++A  + +D  +++ ++PE + IAGL++K+ +I+++Y  Q
Sbjct:  597 HAFKLIVEHNLWASIQNKVVNLMMIDRESALRMLVHQIKSDQLKVSAIVKQLE--HKRELLHEYLHNLFVHRLADYNTESYASLHELQVSLYAEFAPNYL-----------LKFLQTSAFVPLERAYKFCSERSPPLWDAMIFILGRMGQHKKALDFIMTQLQNVKQAIQFVQDNDDELWDYLIEISLTNKEYIEELLEYACDHKIDPIKVMRKIPEDMEIAGLKTKVQQIIANYRIQ 821          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A5D6XHY4_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY4_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.800e-46
Identity = 94/236 (39.83%), Postives = 139/236 (58.90%), Query Frame = 1
Query:   61 HVFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYVDKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            H F LI  H LW  V   V  L+Q+ R  A  +L+   ++L V  +V QL     R+L H YLH LF   P  YNA  YA  H  QV+L+AEFAP F+           L FL+ S++ PLE A T C  R PPL+D M++ILG++G  +RAL+++L ++ ++  AI FV+ +D  LW  +ID SL ++A +  LL  A  + +D  +LI ++PE + I  L++KL+ I+++Y  Q
Sbjct:  650 HAFKLITEHQLWPLVQHKVANLMQIDRASAVRMLVAQTEQLKVPDIVKQLE--HDRELLHEYLHELFVLRPSEYNAEAYAPLHEAQVALYAEFAPAFL-----------LRFLQTSNFVPLEKAYTYCSERNPPLWDAMIYILGRMGQHKRALDLILTQLHDIHHAIRFVQENDASLWDYVIDLSLTSQANVEQLLQFASQHKIDPIKLIRKIPEDMPIDNLKAKLLDIIANYRIQ 872          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A067BPI1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPI1_SAPPC)

HSP 1 Score: 168 bits (426), Expect = 5.410e-44
Identity = 92/238 (38.66%), Postives = 143/238 (60.08%), Query Frame = 1
Query:   61 HVFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYV--DKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            H F LI  H LW  V   V  L+ + R+ A  +L+  +  D+L V ++V QL    +R+L H YLH LF      YN  +Y+  H  QV+L+AEFAP  +           L FL+ SS+ PLE A   C  R PPL+D MVFILG++G  ++AL+ ++ ++ NV++AI+FVE HD  LW  LI+ SL +   +  LL++A  + +D  +++ ++PE + IAGL+ K+++I+++Y  Q
Sbjct:  567 HAFKLIVEHNLWDSVQNKVVNLMLIDRDAALRMLVHQIKSDELKVHAIVKQLE--HKRELLHEYLHNLFVHRLVDYNTDKYSSLHEMQVALYAEFAPHVL-----------LRFLQTSSFVPLEKAYKFCSERSPPLWDAMVFILGRMGQHKKALDFIMTQLKNVKQAIQFVEDHDSGLWDYLIEISLSHTECMEELLEYACDHKIDPIKVMQKIPEDMEIAGLKDKVLQIITNYRIQ 791          
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Match: A0A024TL48_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL48_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.950e-44
Identity = 89/238 (37.39%), Postives = 141/238 (59.24%), Query Frame = 1
Query:   61 HVFGLIETHGLWAQVSESVPQLVQLSRERAGELLLRYV--DKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYALFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECERRRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQLIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKILSDYSFQ 768
            H F LI  H LW  +   V  L+ + R+ A  +L+  V  D+L V ++V QL    +RDL H YLH LF      YN   YA  H +Q+SL+AEFAP           S  + FL+ S++ PLE A   C  R PPL+D M+FILG++G  ++AL+ +L ++ +V  AI+FV+ H  +LW  L++ SL N  ++  LL++A  + +D  +++ ++P  + IAGL++K+ +I+++Y  Q
Sbjct:  615 HAFKLIVEHNLWDAIRNKVVNLMHIDRDAALRMLVHQVQSDQLNVHAIVDQLE--HKRDLLHEYLHNLFVHRFADYNVEAYASLHERQISLYAEFAP-----------SLLVPFLQTSAFVPLEKAYQFCSERSPPLWDAMIFILGRMGHQKKALDFILTQLRDVHHAIQFVQEHGDDLWEYLVEISLTNRGYMEQLLEYASDHQIDPIKIVRKIPPDMEIAGLKAKVQQIIANYRIQ 839          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7994.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFS4_9PHAE1.460e-10164.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS06_ECTSI7.580e-9965.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBT2_9STRA3.490e-7055.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TUN1_9STRA2.180e-5841.22Vacuolar protein sorting-associated protein 41 n=2... [more]
F0XVF2_AURAN3.880e-4942.13Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2CJP2_9STRA1.670e-4744.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A485LHE2_9STRA1.120e-4639.08Aste57867_21416 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XHY4_9STRA5.800e-4639.83RING-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A067BPI1_SAPPC5.410e-4438.66Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024TL48_9STRA5.950e-4437.39Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7994contigP-wetherbeei_contig7994:277..1727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FS06
Preferred nameVPS41
PFAMsClathrin,Vps39_2
Model size768
Max annot lvl2759|Eukaryota
KEGG koko:K20184
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005798,GO:0005829,GO:0005856,GO:0006403,GO:0006508,GO:0006605,GO:0006623,GO:0006624,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006903,GO:0006906,GO:0006914,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007041,GO:0007154,GO:0007220,GO:0007275,GO:0007568,GO:0008017,GO:0008055,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008333,GO:0008340,GO:0008593,GO:0009056,GO:0009058,GO:0009267,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010259,GO:0010467,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0016237,GO:0016482,GO:0016485,GO:0017016,GO:0017137,GO:0018130,GO:0019438,GO:0019538,GO:0019748,GO:0019899,GO:0022406,GO:0022411,GO:0023051,GO:0023057,GO:0030135,GO:0030136,GO:0030897,GO:0031090,GO:0031267,GO:0031338,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0032258,GO:0032501,GO:0032502,GO:0032879,GO:0032889,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033060,GO:0033227,GO:0033263,GO:0033365,GO:0033554,GO:0034058,GO:0034613,GO:0034727,GO:0035542,GO:0042144,GO:0042440,GO:0042441,GO:0042594,GO:0042802,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043324,GO:0043473,GO:0043474,GO:0043621,GO:0043933,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044804,GO:0045055,GO:0045184,GO:0045324,GO:0045746,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046872,GO:0046903,GO:0046907,GO:0046914,GO:0048066,GO:0048069,GO:0048193,GO:0048278,GO:0048284,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051604,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0060548,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0070727,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097352,GO:0097576,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:0098852,GO:0099022,GO:0099023,GO:0140056,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902500,GO:1902774
Exons3
Evalue1.24e-99
EggNOG OGsKOG2066@1|root,KOG2066@2759|Eukaryota
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-12_006960.1
Descriptionregulation of SNARE complex assembly
Cds size768
COG categoryS
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187013.7535124-CDS-P-wetherbeei_contig7994:276..5941683187013.7535124-CDS-P-wetherbeei_contig7994:276..594Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7994 277..594 +
1683187013.7648678-CDS-P-wetherbeei_contig7994:1006..12731683187013.7648678-CDS-P-wetherbeei_contig7994:1006..1273Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7994 1007..1273 +
1683187013.775939-CDS-P-wetherbeei_contig7994:1544..17271683187013.775939-CDS-P-wetherbeei_contig7994:1544..1727Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7994 1545..1727 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7994.1.1prot_P-wetherbeei_contig7994.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7994 277..1727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7994.1.1

>prot_P-wetherbeei_contig7994.1.1 ID=prot_P-wetherbeei_contig7994.1.1|Name=mRNA_P-wetherbeei_contig7994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
GSGSGESAGGNGNVGGGDYGHVFGLIETHGLWAQVSESVPQLVQLSRERA
GELLLRYVDKLPVASVVGQLRAAGRRDLQHWYLHLLFAQAPEMYNAPEYA
LFHAQQVSLHAEFAPPFVAGRSPPYDSDFLAFLRGSSYAPLELALTECER
RRPPLYDEMVFILGKLGGTRRALNILLERIGNVQRAIEFVESHDKELWYQ
LIDYSLRNEAFLTGLLDHAGVYNVDIARLISEVPEGIRIAGLRSKLIKIL
SDYSFQ
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mRNA from alignment at P-wetherbeei_contig7994:277..1727+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7994.1.1 ID=mRNA_P-wetherbeei_contig7994.1.1|Name=mRNA_P-wetherbeei_contig7994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1451bp|location=Sequence derived from alignment at P-wetherbeei_contig7994:277..1727+ (Phaeothamnion wetherbeei SAG_119_79)
GGCAGCGGCAGCGGCGAGAGTGCAGGAGGGAACGGAAACGTCGGTGGCGG CGATTACGGGCACGTCTTTGGGCTGATCGAGACGCACGGCCTGTGGGCGC AAGTGTCGGAGAGCGTGCCACAGCTGGTGCAGCTGTCGCGAGAGCGGGCG GGCGAGCTGCTACTCCGCTACGTCGACAAGCTGCCTGTGGCGAGCGTCGT GGGTCAGCTACGGGCGGCCGGGCGGCGCGACCTGCAGCACTGGTATCTTC ACCTGCTCTTTGCCCAGGCGCCAGAGATGTATAATGCCCCCGAATACGCG CTCTTCCACGCCCAGCAGGTGCGGCATATACTGTATTTAGGATCGGTCAA CGCAATGGGCCGGTTCTCGTCCACTTCTGTGTTGAAAGTTTGCGAGGTTT TCCAACTGCGGTACCTGAAGACGGGATGCTGAAACTTGTGCATTCAAAGC GGGTGCGTAGATACAGCCTCCTGGGTGTTCGAGATGCTGTTTGCAGTCAG AGATTAATTCAGTCGCCCGGATGGTTGGTTATACTTTTCTCTCCGTGTGC TCCCATTCCTCTTTCCTCCTTCCCGTGCCAGCAGAAGTAGATTCCGACTG TCCTTCACAACTCCTGGAATCCGCTATCCTTTCTGCGCCCCCCCCCCCCG TCTCTGTCGGTCCCCGAATAATCTCGTGCCGCCCACACCTTTGATTCCCT CCTGCCGCCTGTTTCGCTGCTTGTGTTCAGGTGTCCCTCCACGCCGAGTT TGCGCCGCCGTTCGTCGCTGGGCGCAGCCCGCCTTACGATAGCGACTTCC TCGCCTTCCTGCGGGGCAGCTCCTACGCTCCGCTGGAGCTGGCGCTCACG GAGTGCGAGCGGCGGCGGCCACCGCTGTACGATGAAATGGTGTTCATTTT GGGCAAGCTGGGCGGCACCCGCCGCGCTCTCAACATCCTGCTGGAGCGCA TCGGGAATGTGCAACGCGCCATCGAGTTTGTGGAGAGCCACGATAAGGTG GGCGTTTCTCGGTGGTCTCCCTTTTTCAACCATTGAGACTCGCCTGCAGA TGTGTTTAACCGTCTTTCGAGTACCGTTTCTGAGCAGCGGAAGGTCCAAA AAATCTGTTAAAGTGTAATACGCTTGGATAATGTGAAATTGGTAAAGGTA AAGGAATGTGAGGATACTGTTGTGGAAGGTTTCGTTTCTGAATTACTGCC TTCATTCGTCCTTTTTCCTTCTACGTCCCTCCCGGTTTTTGAAATTGGAG ACGTGCGGCCGGTCGCAGGAGCTGTGGTATCAGCTGATCGACTACTCGCT GCGCAATGAGGCATTCCTCACGGGGCTGCTGGACCATGCGGGCGTCTATA ACGTCGATATTGCCCGCCTCATTTCCGAGGTGCCTGAGGGGATTCGCATC GCCGGCCTGCGATCCAAGCTCATCAAGATTCTCTCCGATTACAGCTTCCA G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7994:277..1727+

>mRNA_P-wetherbeei_contig7994.1.1 ID=mRNA_P-wetherbeei_contig7994.1.1|Name=mRNA_P-wetherbeei_contig7994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig7994:277..1727+ (Phaeothamnion wetherbeei SAG_119_79)
GGCAGCGGCAGCGGCGAGAGTGCAGGAGGGAACGGAAACGTCGGTGGCGG
CGATTACGGGCACGTCTTTGGGCTGATCGAGACGCACGGCCTGTGGGCGC
AAGTGTCGGAGAGCGTGCCACAGCTGGTGCAGCTGTCGCGAGAGCGGGCG
GGCGAGCTGCTACTCCGCTACGTCGACAAGCTGCCTGTGGCGAGCGTCGT
GGGTCAGCTACGGGCGGCCGGGCGGCGCGACCTGCAGCACTGGTATCTTC
ACCTGCTCTTTGCCCAGGCGCCAGAGATGTATAATGCCCCCGAATACGCG
CTCTTCCACGCCCAGCAGGTGTCCCTCCACGCCGAGTTTGCGCCGCCGTT
CGTCGCTGGGCGCAGCCCGCCTTACGATAGCGACTTCCTCGCCTTCCTGC
GGGGCAGCTCCTACGCTCCGCTGGAGCTGGCGCTCACGGAGTGCGAGCGG
CGGCGGCCACCGCTGTACGATGAAATGGTGTTCATTTTGGGCAAGCTGGG
CGGCACCCGCCGCGCTCTCAACATCCTGCTGGAGCGCATCGGGAATGTGC
AACGCGCCATCGAGTTTGTGGAGAGCCACGATAAGGAGCTGTGGTATCAG
CTGATCGACTACTCGCTGCGCAATGAGGCATTCCTCACGGGGCTGCTGGA
CCATGCGGGCGTCTATAACGTCGATATTGCCCGCCTCATTTCCGAGGTGC
CTGAGGGGATTCGCATCGCCGGCCTGCGATCCAAGCTCATCAAGATTCTC
TCCGATTACAGCTTCCAG
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