mRNA_P-wetherbeei_contig7960.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7960.3.1
Unique NamemRNA_P-wetherbeei_contig7960.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A351T322_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T322_9PROT)

HSP 1 Score: 292 bits (748), Expect = 2.010e-96
Identity = 172/258 (66.67%), Postives = 185/258 (71.71%), Query Frame = 1
Query:   19 DIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRSATRSICTPE 792
            DIHPTA+V  GA++G              XXXXXXXXX              GT IFPFASIGHPPQD KY+GE S L IG + VIRE+VTMNPGT+GGGM+TRVGD GLFMAG+HVAHDC VGN+VILA                  GLSAVQQF R    XXXX  SGV  DVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIH LRNAYRMLFA EGTLQER+EDVA LF+ H EVMEIV FIR ATRSICTP+
Sbjct:    3 DIHPTALVAEGAKIGAXXXXXXXXXXXXXXXXXXXXXXVSHVVVEGRTTIGRGTRIFPFASIGHPPQDQKYSGEKSVLQIGEDNVIRENVTMNPGTSGGGMITRVGDRGLFMAGSHVAHDCVVGNNVILANNATLAGHVEAGDFAIFGGLSAVQQFVRIGAHXXXXXXSGVESDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHALRNAYRMLFAEEGTLQERMEDVAELFKDHGEVMEIVTFIRGATRSICTPK 260          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A1G3IRF7_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15 TaxID=1802023 RepID=A0A1G3IRF7_9PROT)

HSP 1 Score: 270 bits (691), Expect = 1.050e-87
Identity = 150/258 (58.14%), Postives = 178/258 (68.99%), Query Frame = 1
Query:   19 DIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTP 789
            +IHPTAVV   A+LG  V IGPYC +G +                       GT I+PFAS+GHPPQDLKY GE S L++G   VIREHVT+NPGT GGGM+T+ GD  LFM GAHVAHDC++GNHVIL           XXXXXXXX LSAV QF R        GMSGV +DVIPYGSV GNRA L GLNI+GLKRR+FSR+ IH LRNAYR+LFA EGT+ ERLEDV+ +F  +  VM+IV+FIR+ ++R+IC P
Sbjct:    3 NIHPTAVVDGKARLGPGVEIGPYCCVGPDVELKEGVRLISHAVVTGSTTVGEGTLIYPFASVGHPPQDLKYKGEKSRLVVGRRNVIREHVTLNPGTEGGGMLTQTGDECLFMVGAHVAHDCRIGNHVILVNSATLGGHVRXXXXXXXXXLSAVHQFVRIGKHAMVGGMSGVENDVIPYGSVTGNRARLSGLNIVGLKRRDFSRDVIHALRNAYRLLFAQEGTMTERLEDVSEMFHDNEPVMDIVNFIRADSSRAICHP 260          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A1G3I4Z3_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_01_FULL_65_14 TaxID=1802020 RepID=A0A1G3I4Z3_9PROT)

HSP 1 Score: 266 bits (681), Expect = 3.450e-86
Identity = 140/260 (53.85%), Postives = 174/260 (66.92%), Query Frame = 1
Query:   19 DIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPEV 795
            +IHPTA+V  GA++G NV IGPY ++G +                        T +FPFASIGH PQDLK+ GE S L IG N VIRE+VTMNPGT GGGMVT++G+N LFM GAHVAHDC++ +HVIL                   GLSAV QF R        GM+GV +DVIPYGSV+GNRA L GLNIIGLKRRNFSR+ IH LR AYR++FA EGT+ ERL+DVA LF  +  VM+IV+FI++ ++R+IC P++
Sbjct:    3 EIHPTAIVERGAEIGDNVVIGPYSMVGSDARLADGVTLVSHVVVAGRTSIGANTRVFPFASIGHQPQDLKFKGELSRLEIGCNNVIREYVTMNPGTEGGGMVTQIGNNCLFMIGAHVAHDCRIADHVILVNSATLAGHVTVDEWAIVGGLSAVHQFVRIGKHAMVGGMTGVSNDVIPYGSVIGNRARLSGLNIIGLKRRNFSRDHIHDLRKAYRLIFAEEGTMAERLQDVAELFHANESVMDIVNFIKADSSRAICQPKM 262          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A2E9XZ66_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9XZ66_9PROT)

HSP 1 Score: 263 bits (672), Expect = 7.980e-85
Identity = 167/260 (64.23%), Postives = 196/260 (75.38%), Query Frame = 1
Query:   19 DIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPEV 795
            +IHPTA+V  GA+LG  V IGPYC     XXXXXXXXX                 I+PFA +G  PQD KYAGE+SELI+GAN V+REHVTM+PGT GGGMVTRVG+N L M GAH+AHDCQ+G+HVIL      XXXXXXXXXXXXX +SAV QF R   XXXXXG S V  DVIPYGSVLGNRA+L GLNIIGLKRR FSR++IHGLR AYR+LFA EGT+QERL DVA +F  H +VMEIV FI++ ++R++C P++
Sbjct:    3 EIHPTAIVEDGAKLGTGVRIGPYCTXXXXXXXXXXXXXDSHVVIAGRTTIGPNNRIYPFAVVGSAPQDTKYAGEASELILGANNVVREHVTMHPGTEGGGMVTRVGNNCLIMVGAHLAHDCQLGDHVILVNNVILXXXXXXXXXXXXXXMSAVHQFVRIGRXXXXXGKSAVESDVIPYGSVLGNRAYLSGLNIIGLKRRGFSRDEIHGLRAAYRLLFAQEGTMQERLVDVAAMFAEHEQVMEIVAFIQADSSRALCQPKL 262          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A1F3AY41_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8 TaxID=1797233 RepID=A0A1F3AY41_9PROT)

HSP 1 Score: 259 bits (663), Expect = 1.840e-83
Identity = 158/260 (60.77%), Postives = 181/260 (69.62%), Query Frame = 1
Query:   16 TDIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPE 792
            T IHPTA+V   A L  +V IGPYC     XXXXXXXXXXXXXXX        GT + PFAS+G PPQDLKY GE SEL IG N VIREHVTMNPGT GGGMVTRVGD+ LFM GAHVAHDCQ+ N+VIL                   GLSAV QF R        GM+GV +DVIPYGSV+G RA L GLNI+GLKRR F R+ IH LRNAYR+LFA EG L ER++DVA LF+ +A VMEIV+FI + ++R+IC P+
Sbjct:    2 TTIHPTAIVDGKANLADSVVIGPYCXXXXXXXXXXXXXXXXXXXXDGRTTVGDGTLVHPFASLGSPPQDLKYKGEPSELFIGKNNVIREHVTMNPGTEGGGMVTRVGDDCLFMVGAHVAHDCQISNNVILVNNATLAGHVVVGEFAICGGLSAVHQFVRIGKHAMIGGMTGVENDVIPYGSVVGARASLMGLNIVGLKRRGFDRDTIHSLRNAYRLLFAPEGVLSERVKDVAELFKENAAVMEIVEFISADSSRAICQPK 261          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A327JQA4_9HYPH (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Rhodobium orientis TaxID=34017 RepID=A0A327JQA4_9HYPH)

HSP 1 Score: 259 bits (662), Expect = 2.610e-83
Identity = 154/257 (59.92%), Postives = 177/257 (68.87%), Query Frame = 1
Query:   22 IHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRSAT-RSICTP 789
            IHPTAVV   A L  +V IGPYCV+G  XXXXXXXXXXXXXX            +FPF+SIG PPQDLKY GE S L+IGA+TV+REHVTMNPGT GGG+VT +G+  L M GAHVAHDC++GN VIL                   GL AV Q+ R        GMSGV +DVIP+GSV+GNRAHLGGLNI+GLKR  FSREQIH LR AYR+LFA EGTL ER+EDVA  F     V  IV+FIRS + R++CTP
Sbjct:    4 IHPTAVVDAAATLADDVRIGPYCVIGXXXXXXXXXXXXXXXXVDGRTEIGPRAKLFPFSSIGLPPQDLKYRGEESRLVIGADTVVREHVTMNPGTEGGGLVTEIGERCLIMVGAHVAHDCRIGNDVILVNNATLAGHVTIEDHAILGGLCAVHQWVRVGAHAFVGGMSGVENDVIPFGSVIGNRAHLGGLNIVGLKRCGFSREQIHALRKAYRLLFADEGTLLERVEDVARTFEDEPLVQTIVEFIRSGSDRALCTP 260          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A2P5VLN6_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha1_Bin1 TaxID=2013065 RepID=A0A2P5VLN6_9PROT)

HSP 1 Score: 258 bits (660), Expect = 5.250e-83
Identity = 150/261 (57.47%), Postives = 179/261 (68.58%), Query Frame = 1
Query:   16 TDIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPEV 795
            T+IH TA+V  GA LG  V IGPYC++  +  XXXXXXXXXXXX            IFPFA+IG  PQD KYA E SELIIGAN +IREHVT++PGTAGG M TR+G+N LFM GAHVAHDC +G+HVIL                    +S V QF R        G S V+ DVIPYGSV+GNRA+L GLNIIGLKRR F R +IHGLR AYR+LFA EGT+QERL DVA +F  H +VMEIV FIR+ ++R++C P++
Sbjct:    2 TNIHQTAIVEDGATLGDGVQIGPYCIVSADVNXXXXXXXXXXXXIDGRTTIGPNCRIFPFAAIGTAPQDTKYAEEPSELIIGANNIIREHVTIHPGTAGGAMCTRIGNNCLFMVGAHVAHDCLIGDHVILINNVGLGGHVEVQDRAILGAMSGVHQFCRVGRHAMIGGKSAVISDVIPYGSVVGNRAYLSGLNIIGLKRRGFGRNEIHGLRAAYRLLFAQEGTMQERLVDVANMFADHEQVMEIVTFIRADSSRALCQPKL 262          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A7V2ALU1_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2ALU1_9PROT)

HSP 1 Score: 258 bits (658), Expect = 1.050e-82
Identity = 148/261 (56.70%), Postives = 172/261 (65.90%), Query Frame = 1
Query:   16 TDIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPEV 795
            TDIH TA++  GA LG NV IGPYC +G +                        T IFPFASIG  PQDLKY+GE S L IG N VIRE VT+NPGT  GGM+TRVG+N LFM GAHVAHDC+V +HVIL                   GLSAV QF  XXXXXXXX   G+ +DVIPYGSV+GNRA L GLN++GLKRRNF RE IH LR+AYR++FA EGTL ERLEDVA +      VMEIVDFIR+  +R+IC P++
Sbjct:    2 TDIHATALIAEGANLGENVKIGPYCTVGPHVQLDDGIELVSHVVVDGITTIGANTRIFPFASIGLQPQDLKYSGEPSRLEIGCNNVIREQVTINPGTENGGMLTRVGNNCLFMVGAHVAHDCEVADHVILVNNATLGGHVKIGEWAILGGLSAVHQFXXXXXXXXXXXXXGIENDVIPYGSVIGNRARLQGLNVVGLKRRNFDRETIHALRSAYRLMFAREGTLAERLEDVAEMMSDIEPVMEIVDFIRADGSRAICQPDM 262          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A7Z9S3M3_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7Z9S3M3_9PROT)

HSP 1 Score: 256 bits (655), Expect = 3.000e-82
Identity = 134/260 (51.54%), Postives = 167/260 (64.23%), Query Frame = 1
Query:   19 DIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPEV 795
            +IHPTA++  GA++G NV IGPY ++G +                        T IFPFASIGH PQDLKY GE+S L IG N VIRE+VTMNPGT GGGM TR+G+N LFM  AHVAHDCQ+ ++VIL                   GLSAV QF R        G +GV +DVIPYGSV+GNRA L GLNI+GLKRR+FSRE I  LR AYR++FA EGT  ER+ DVA LF  +  V +I++FI + ++R+IC P++
Sbjct:    3 EIHPTAIIADGAKIGENVSIGPYSMVGSDVELDDGVELISHVVVTGHTSIGANTRIFPFASIGHQPQDLKYQGEASSLTIGCNNVIREYVTMNPGTEGGGMATRIGNNCLFMVAAHVAHDCQIADNVILVNNATLAGHVSIEDWAIIGGLSAVHQFVRIGKHSMIGGKTGVAEDVIPYGSVIGNRARLSGLNIVGLKRRDFSREDIQNLRKAYRLIFAEEGTFAERILDVAELFPDNEPVQDIINFINADSSRAICQPKM 262          
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Match: A0A350YI67_9PROT (Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A350YI67_9PROT)

HSP 1 Score: 254 bits (649), Expect = 2.360e-81
Identity = 163/261 (62.45%), Postives = 193/261 (73.95%), Query Frame = 1
Query:   13 TTDIHPTAVVCTGAQLGRNVHIGPYCVLGKNXXXXXXXXXXXXXXXXXXXXXXXGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNPGTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILAXXXXXXXXXXXXXXXXXXGLSAVQQFARXXXXXXXXGMSGVVDDVIPYGSVLGNRAHLGGLNIIGLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIVDFIRS-ATRSICTPE 792
            T+ IH TA+V   AQ+G +V IGPYCV+G +                       GT I+PFASIGH PQDLKY GE S L IGAN  IRE+VTMNPGT GGGM+T+VGDNGL+M G+HVAHDC VGN+VI+A XXXXXXXXXXXXXXXXX L+AVQQF RXXXXXXXX  SGV +DVIPYG V G RAHL GLNI+GL+RR FSR+ IH LR+AYRMLF+ EGT+ ER++DVA  +   A V  ++DFIRS  +R++C PE
Sbjct:    2 TSSIHSTAIVDPKAQIGADVEIGPYCVVGGDVRLGDKVRLVAHVVVDGRTTVGAGTVIYPFASIGHRPQDLKYHGEPSTLEIGANNQIRENVTMNPGTEGGGMLTKVGDNGLYMVGSHVAHDCIVGNNVIMANXXXXXXXXXXXXXXXXXXLAAVQQFVRXXXXXXXXXXSGVENDVIPYGMVKGERAHLAGLNIVGLERRRFSRDDIHALRSAYRMLFSKEGTMAERIDDVAEHYGNQALVDGMIDFIRSRGSRALCQPE 262          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7960.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351T322_9PROT2.010e-9666.67Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A1G3IRF7_9PROT1.050e-8758.14Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A1G3I4Z3_9PROT3.450e-8653.85Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A2E9XZ66_9PROT7.980e-8564.23Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A1F3AY41_9PROT1.840e-8360.77Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A327JQA4_9HYPH2.610e-8359.92Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A2P5VLN6_9PROT5.250e-8357.47Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A7V2ALU1_9PROT1.050e-8256.70Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A7Z9S3M3_9PROT3.000e-8251.54Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]
A0A350YI67_9PROT2.360e-8162.45Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosami... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7960contigP-wetherbeei_contig7960:1772..2569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380394.JADL01000005_gene5528
Preferred namelpxA
PFAMsAcetyltransf_11,Hexapep,Hexapep_2
Model size798
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00039,RC00055
KEGG koko:K00677
KEGG ReactionR04567
KEGG Pathwayko00540,ko01100,ko01503,map00540,map01100,map01503
KEGG ModuleM00060
Hectar predicted targeting categoryother localisation
Exons1
Evalue3e-82
EggNOG OGsCOG1043@1|root,COG1043@2|Bacteria,1MUHQ@1224|Proteobacteria,2TRK9@28211|Alphaproteobacteria,2JPHM@204441|Rhodospirillales
EC2.3.1.129
DescriptionInvolved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Cds size798
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01005
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187011.967195-CDS-P-wetherbeei_contig7960:1771..25691683187011.967195-CDS-P-wetherbeei_contig7960:1771..2569Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7960 1772..2569 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7960.3.1prot_P-wetherbeei_contig7960.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7960 1772..2569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7960.3.1

>prot_P-wetherbeei_contig7960.3.1 ID=prot_P-wetherbeei_contig7960.3.1|Name=mRNA_P-wetherbeei_contig7960.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MNVATTDIHPTAVVCTGAQLGRNVHIGPYCVLGKNVTLGENVTLHSHVSI
AGKTSIGAGTTIFPFASIGHPPQDLKYAGESSELIIGANTVIREHVTMNP
GTAGGGMVTRVGDNGLFMAGAHVAHDCQVGNHVILANHATLAGHVTVGDY
AILGGLSAVQQFARVGQHAMIGGMSGVVDDVIPYGSVLGNRAHLGGLNII
GLKRRNFSREQIHGLRNAYRMLFAAEGTLQERLEDVATLFRGHAEVMEIV
DFIRSATRSICTPEV*
back to top

mRNA from alignment at P-wetherbeei_contig7960:1772..2569-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7960.3.1 ID=mRNA_P-wetherbeei_contig7960.3.1|Name=mRNA_P-wetherbeei_contig7960.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig7960:1772..2569- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTGGCCACAACAGACATTCATCCCACGGCTGTCGTGTGCACGGG TGCGCAACTGGGGCGCAATGTGCATATCGGTCCCTATTGCGTGCTGGGTA AAAATGTTACCCTGGGCGAAAATGTGACCCTGCATTCCCATGTCAGCATT GCCGGAAAAACCAGCATTGGCGCGGGAACCACCATCTTTCCTTTCGCGTC CATCGGGCATCCGCCGCAGGATCTGAAATATGCGGGCGAAAGCAGCGAAC TGATCATCGGCGCAAATACTGTCATCCGCGAACATGTGACCATGAACCCC GGCACGGCGGGCGGCGGCATGGTGACGCGGGTGGGTGACAATGGCCTGTT CATGGCGGGCGCGCATGTGGCGCATGACTGTCAGGTCGGCAACCATGTGA TTTTGGCAAACCACGCGACCCTTGCAGGCCATGTGACGGTCGGCGATTAC GCCATTCTGGGCGGCCTGTCGGCGGTGCAGCAATTTGCCCGCGTCGGACA GCACGCCATGATCGGCGGCATGTCCGGTGTAGTGGACGATGTCATTCCCT ATGGCTCGGTTCTGGGCAACCGCGCGCATCTGGGCGGGCTGAATATTATC GGCCTGAAGCGGCGCAATTTTTCGCGCGAGCAAATTCACGGGTTGCGCAA CGCCTATCGCATGCTGTTTGCCGCCGAAGGCACGTTGCAGGAACGCCTGG AAGATGTCGCCACGCTGTTCAGGGGCCATGCGGAGGTGATGGAGATTGTG GACTTCATCCGCTCCGCCACCCGCAGCATCTGCACGCCCGAAGTTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7960:1772..2569-

>mRNA_P-wetherbeei_contig7960.3.1 ID=mRNA_P-wetherbeei_contig7960.3.1|Name=mRNA_P-wetherbeei_contig7960.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig7960:1772..2569- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTGGCCACAACAGACATTCATCCCACGGCTGTCGTGTGCACGGG
TGCGCAACTGGGGCGCAATGTGCATATCGGTCCCTATTGCGTGCTGGGTA
AAAATGTTACCCTGGGCGAAAATGTGACCCTGCATTCCCATGTCAGCATT
GCCGGAAAAACCAGCATTGGCGCGGGAACCACCATCTTTCCTTTCGCGTC
CATCGGGCATCCGCCGCAGGATCTGAAATATGCGGGCGAAAGCAGCGAAC
TGATCATCGGCGCAAATACTGTCATCCGCGAACATGTGACCATGAACCCC
GGCACGGCGGGCGGCGGCATGGTGACGCGGGTGGGTGACAATGGCCTGTT
CATGGCGGGCGCGCATGTGGCGCATGACTGTCAGGTCGGCAACCATGTGA
TTTTGGCAAACCACGCGACCCTTGCAGGCCATGTGACGGTCGGCGATTAC
GCCATTCTGGGCGGCCTGTCGGCGGTGCAGCAATTTGCCCGCGTCGGACA
GCACGCCATGATCGGCGGCATGTCCGGTGTAGTGGACGATGTCATTCCCT
ATGGCTCGGTTCTGGGCAACCGCGCGCATCTGGGCGGGCTGAATATTATC
GGCCTGAAGCGGCGCAATTTTTCGCGCGAGCAAATTCACGGGTTGCGCAA
CGCCTATCGCATGCTGTTTGCCGCCGAAGGCACGTTGCAGGAACGCCTGG
AAGATGTCGCCACGCTGTTCAGGGGCCATGCGGAGGTGATGGAGATTGTG
GACTTCATCCGCTCCGCCACCCGCAGCATCTGCACGCCCGAAGTTTAG
back to top