mRNA_P-wetherbeei_contig7959.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 167 bits (423), Expect = 2.120e-44 Identity = 97/249 (38.96%), Postives = 141/249 (56.63%), Query Frame = 1
Query: 13 DFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAG-----CSCACTLDIDSVSDSEVYSMMADLLESMAN--QNEAFVAMDEDGR--YVFQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWV-DGDCYGSGATDEQPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGT 729
D +A+ AHP+ LL+ LEY+T W N++ P A+ C + + G C C C +D ++ D +VY+ M D + S + Q + +++ D D R Y F QD L+ + N L+R L+ +GC PG VG M T ASPLDP+F++LH +FEKAL + L+ R+R +S +W DG C GSG TDE PFTE +LG+ G G + F+ N L L P+ A+PY+Y+ F +WGT
Sbjct: 368 DMSAFSEAHPEYSAGLLSFVLEYMTFTFWPTNSF--------IPQANVCQTSCSTGQDERFCRCTCMIDAFAIDDKQVYAYMEDFMTSASVKFQGDQYISYDGDVRFPYGFMQDQTRLSDEENLLLMRYLIKIGCEPGAVGSMTTLASPLDPLFYMLHSMFEKALHIVWLSPRYRDSFSMDWAEDGICPGSGYTDELPFTESLLGL-GEGTT-------FVTNERLFELLHPSNPAVPYIYEDFAKWGT 600
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: A0A6H5JYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD0_9PHAE) HSP 1 Score: 160 bits (404), Expect = 4.340e-43 Identity = 99/250 (39.60%), Postives = 127/250 (50.80%), Query Frame = 1
Query: 7 QVDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEVYSMMADLLESMANQ--NEAFVAMDEDG--RYVFQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDC---YGSGATDE-QPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGTC 732
QVD +Q HP LL+ ALEYI W N++ +N C + C C C C D SD EVY MM + +M N+ + +V D +Y FQQ+ V L D N L+R LL + C PG +G M+ G S LDP+FW LHP+FEKA Q L+L+ ++ Y F WV DC G DE PFTER G G G D+ L N +++ PT LPYVYD F+ WG C
Sbjct: 170 QVDMVQFQEDHPVFKAGLLSFALEYILVGTWPSNSF--MKSHNTCDMS--CTVGQTQDCGCTCNTDFYDWSDDEVYDMMESQMGTMNNRAHGDKYVYRDLGATYQYGFQQNGVRLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQLLQLSPTYKDTYDFTWVGIDCGDGVSGGQVDETMPFTERDFGF-GDG-------DEPLTNQEIIDFLFPTNPRLPYVYDKFDSWGVC 407
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: D7FVH6_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVH6_ECTSI) HSP 1 Score: 162 bits (411), Expect = 2.180e-42 Identity = 98/249 (39.36%), Postives = 128/249 (51.41%), Query Frame = 1
Query: 10 VDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEVYSMMADLLESMANQNEA--FVAMDEDG--RYVFQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDC---YGSGATDE-QPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGTC 732
VD +Q +P + LL+ ALEYI W N++ D+N C + C C C C D SD EVY M +E+M N+ +V D+ +Y FQQ+ V L D N L+R LL + C PG +G M+ G S LDP+FW LHP+FEKA Q L+L+ ++ Y F WV DC G DE PFTER G G G D+ L N +++ PT LPYVYD F+ WG C
Sbjct: 468 VDMVQFQEDNPGLKAGLLSFALEYILVGMWPSNSF--MGDHNTCDTS--CTVGQTQDCGCTCDTDFHDWSDDEVYDKMESQMETMQNRAHGTKYVYRDDGATYQYGFQQNGVRLEHDDNMLLMRTLLTLACEPGALGAMSVGPSILDPVFWALHPIFEKATQILQLSPTYKDTYDFTWVGKDCGDGVSGGQVDETMPFTERDFGF-GDG-------DEPLTNQEIIDFLFPTNPRLPYVYDKFDSWGAC 704
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: A0A6H5KPW4_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE) HSP 1 Score: 162 bits (411), Expect = 2.850e-42 Identity = 96/252 (38.10%), Postives = 131/252 (51.98%), Query Frame = 1
Query: 1 DWQVDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEVYSMMADLLESMANQ--NEAFVAMDEDGR--YVFQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDC----YGSGATDEQPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGTC 732
D +D + +P LLT L Y+ AN+W N+ D N C + C C C C +D +D EVY M D+LES+ + ++V D R Y F Q+ L ++ LLR ++ +GC PG+VG M+TGA+PLDPIFW LH FEKA L+L+ +R Y FEWVD DC G D P+TE+ LG+ GS+ L N DL + P+ LPY+Y+ F +WGTC
Sbjct: 499 DCNIDMIEFHEENPQYDQGLLTFTLGYVLANKWPSNSL--MRDFNECD--EQCDVDQGEPCGCTCLVDPFEWTDDEVYDFMEDVLESLRGRANGASYVGEDVTARHPYGFMQEGERLDEESTMLLLRQMMVIGCQPGKVGAMSTGAAPLDPIFWTLHSGFEKAQHILQLSPGYRDAYDFEWVDADCGDGVAGGKLDDVYPWTEQTLGL-------GEGSE-LLTNADLTEILHPSNPKLPYLYEAFGKWGTC 738
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 160 bits (406), Expect = 4.890e-42 Identity = 92/248 (37.10%), Postives = 138/248 (55.65%), Query Frame = 1
Query: 10 VDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAG---CSCACTLDIDSVSDSEVYSMMADLLESMANQN---EAFVAMDEDGR--YVFQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDCYGSGATDEQPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGT 729
VD + HP+ T LLT +EY+T W N + + P ++ C ++ +G C C C++D ++S+ E+YS+ + L S A Q A+++ DE + FQQ+ L D LLR ++ +GC PG VG+M G SP+DP+FWVLHP+FEKAL L ++ +R YSF W DG C GS D PFT + LG+ G+G + L N +L+ + P+ LP+V++ F+ WGT
Sbjct: 360 VDMHEFHEDHPEYTTGLLTFVVEYLTTKFWPNNAF-------MPPGSNTCETECVSGQEPCGCTCSVDAMALSEDEIYSLTSTFL-SQATQRFSGHAYISYDESSERPWGFQQNGERLDDDATMFLLRQVVKLGCEPGAVGVMVGGVSPMDPLFWVLHPMFEKALHVLWMSPTYRDGYSFGWADGSCSGSKVDDILPFTAQDLGM-GAG-------TELLTNRELMDILHPSNPRLPFVFEKFDTWGT 591
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: A0A6H5JFE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE6_9PHAE) HSP 1 Score: 149 bits (375), Expect = 4.080e-40 Identity = 94/265 (35.47%), Postives = 139/265 (52.45%), Query Frame = 1
Query: 19 AAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEV-------YSMMADLLESMAN--QNEAFVAMDEDGRYVF------------------QQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWV-DGDCYGSGATDEQPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGT 729
+ + AHP+ LL+ LEY+T W N++ NVC + C + C C C +D ++ D +V Y+ M D + S + Q + +++ D D R+ + QD L+ + N L+R L+ +GC PG VG M T ASPLDP+F++LH +FEKAL L L+ ++R +S +W DG C GSG TDE PFTE +LG+ G G + F+ N LL L P+ A+PY+Y+ F +WGT
Sbjct: 2 STFSEAHPEYSAGLLSFVLEYMTFTFWPTNSF--IPQANVCQTS--CSTGQKRFCGCTCMIDAFAIDDEQVGWVGGWVYAYMEDFMTSASVKFQGDQYISYDGDVRFPYGFMQARTRDNPTSSLYPPSQDQNRLSDEENLLLMRYLIKIGCEPGAVGSMMTLASPLDPLFYMLHSMFEKALHILWLSPKYRDSFSMDWAEDGLCPGSGYTDELPFTEYLLGL-GEGTA-------FMTNERLLELLHPSNPAVPYIYEDFARWGT 254
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: A0A6H5KMG1_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.400e-39 Identity = 94/249 (37.75%), Postives = 130/249 (52.21%), Query Frame = 1
Query: 10 VDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEVYSMMADLLESMANQ--NEAFVAMDEDGRYV--FQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDG----DCYGSGATDEQPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWGTC 732
V+ A +Q A+P LLT L+++ AN+W N+ D N C + C C C C D +D +Y M D +E++ + + F+ D R+ F Q L ++ LLR L+ +GC PG VG M+TGA+PLDPIFW LH F+KA L+L+ +R Y F WVD D G D P+TERMLG+ G G + L N DL+ + P+ LPYVY+GF +WGTC
Sbjct: 384 VNMAEFQEANPQFSPELLTFTLQFLLANKWPSNSL--MEDFNYCD--EDCAVGQTHPCGCTCITDPFEWTDDAIYDFMEDAMETLQLRAHGDQFIDEDRSARHPLGFAQKGKRLDDESIMLLLRQLMVIGCEPGEVGAMSTGAAPLDPIFWALHAGFDKAQHILQLSPGYRDTYDFAWVDSESCDDMSGGKLDDLYPWTERMLGL-GDG-------TELLTNSDLVEILHPSNPKLPYVYEGFNKWGTC 620
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 154 bits (388), Expect = 1.540e-39 Identity = 93/246 (37.80%), Postives = 130/246 (52.85%), Query Frame = 1
Query: 1 DWQVDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEVYSMMADLLESMANQNEAF--VAMDEDGRYV--FQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDCYGSGATDEQPFTERMLGISGSGGSSSRGSDDFLRNIDLLGLADPTAAALPYVYDGFEQWG 726
D D A + A HP+ LL L+ +T N D+N C A C C C C +D ++ D +VY M +++ + + DE+ Y F QD ++ + L+R L+ +GC PG VG M++ ASP+DP+FWVLHPLF+KA+ L L+ ++ +Y+ EWVDG+C GSG TDE P TER LG+ G G D+L N LL L P+ ALPYVY +WG
Sbjct: 371 DCNTDMADFSAEHPEYSHGLLAFTLQILTFKFTAWNILTP--DDNTCDAK--CMKGQTEPCGCTCLIDAFAIPDQQVYGYMEAFMDAAMTDFSGYQYITHDEEAAYPYGFIQDGQRMSDEHAMFLMRTLVKIGCEPGAVGTMSSTASPVDPLFWVLHPLFDKAMHILLLSPKY-DEYTMEWVDGECPGSGYTDELPITERSLGL-GPG-------TDYLTNEQLLELLYPSNPALPYVYTDLPRWG 603
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 137 bits (346), Expect = 6.510e-34 Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 1 DWQVDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAGCSCACTLDIDSVSDSEVYSMMADLLESMANQNEAF--VAMDEDGRYV--FQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDCYGSGATDEQPFT 582
D D A + A HP+ LL AL+ +T N D+NVC A+ C C C C +D ++S+ +VY M +E+ + + DE+ Y F QDD ++ + L+R L+ +GC PG VG+M+T ASP+DPIFWVLHPLFEKA+ L L+ ++ +Y+ EWVDG+C GSG TDE P T
Sbjct: 333 DCNTDMANFSAEHPEYSHGLLAFALQILTFKFTACNALTP--DDNVCDAS--CDRGQTEPCGCTCLMDAFAISEEQVYGYMQPFMEAAMTDFSGYLYITHDEEAAYPYGFIQDDHRMSDEHAMFLMRTLVKIGCEPGAVGMMSTAASPVDPIFWVLHPLFEKAMHVLLLSPKY-DEYTMEWVDGECPGSGYTDELPIT 525
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Match: A0A6H5KIG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIG4_9PHAE) HSP 1 Score: 119 bits (298), Expect = 2.410e-28 Identity = 71/202 (35.15%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 1 DWQVDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAADACPSKAAAG----CSCACTLDIDSVSDSEVYSMMADLLESMAN--QNEAFVAMDEDGR--YVFQQDDVPLAADTNAALLRALLAVGCTPGRVGLMATGASPLDPIFWVLHPLFEKALQPLRLAERWRSQYSFEWVDGDCYGSGATDEQPFT 582
D D A + A HP+ LL AL+ +T + A N++ P + C G C C C +D S+ + +V M +++ + ++ DE+ + Y F QDD ++ + L+R L+ +GC PG VG+M+T ASP++P+FWVLHPLFEKA+ L L+ ++ Y+ EWVDG+C GSG T+E T
Sbjct: 36 DCNTDVANFSAEHPEYSHGLLAFALQILT--------FKFTACNSLTPHDNVCDVSYERGQTEPCGCTCLMDASSIPEEQVCGYMQPFMQAAMPYFRGYLYITHDEEAKFPYGFIQDDHRVSDEHAVFLMRTLVKIGCEPGAVGIMSTAASPVNPMFWVLHPLFEKAMHILLLSPKY-DDYTMEWVDGECKGSGYTEELTIT 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7959.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7959.1.1 >prot_P-wetherbeei_contig7959.1.1 ID=prot_P-wetherbeei_contig7959.1.1|Name=mRNA_P-wetherbeei_contig7959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp DWQVDFAAWQAAHPDVGTALLTVALEYITANRWGGNTYPAFADNNVCPAAback to top mRNA from alignment at P-wetherbeei_contig7959:634..1979- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7959.1.1 ID=mRNA_P-wetherbeei_contig7959.1.1|Name=mRNA_P-wetherbeei_contig7959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1346bp|location=Sequence derived from alignment at P-wetherbeei_contig7959:634..1979- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7959:634..1979- >mRNA_P-wetherbeei_contig7959.1.1 ID=mRNA_P-wetherbeei_contig7959.1.1|Name=mRNA_P-wetherbeei_contig7959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig7959:634..1979- (Phaeothamnion wetherbeei SAG_119_79)back to top |