prot_P-wetherbeei_contig7955.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7955.1.1
Unique Nameprot_P-wetherbeei_contig7955.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length441
Homology
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: D7G2Y7_ECTSI (Similar to TNF receptor associated factor 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y7_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 2.670e-73
Identity = 172/380 (45.26%), Postives = 213/380 (56.05%), Query Frame = 0
Query:   12 VRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAGADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEEHCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHGDPAVAAMDADDSAATDAIDL-GMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRGPVKGVAGAWMEVLVVXXXXXXXXSRDGVGGGGLSGELLGAKVDKRNGRMGGATAGGXXXXXXXXXGCSVPAEAGRKWQGGAGAE 390
            VR GQE+ FHE+E+C +R+L C LGCG   RE+EWL+P+  +P +      XXXXXXXXXXXXXXXX EW+PF++L +H +  C++RP PP+ CR  CG  FH G    LQ+ EER++HE ELC  R   C W GC   V A DR  H  +HV+RTG+  +  PG + ++V HGCR LKVQ  G G                    F E LL  + +DE+EVTVG GGAAG YG            D    A  D +D  G+  GGWPGGG+GH GN  WA                              XXXXXXXXSR+GV GGGL+GE+ G K+D RNGRMG AT GG         GC+ P E G+ W GG G +
Sbjct:  279 VRLGQEKFFHETEQCCKRILPCELGCGLRMREEEWLSPSLVNPAVTCQQHHXXXXXXXXXXXXXXXXGEWLPFEDLMKHMKVSCVKRPFPPVKCRLGCGEKFHGGLHRMLQSEEERIDHEHELCPHRLLHCVWAGCEEMVMAKDRRSHSEEHVVRTGVFLYTVPGKYTFKVPHGCRSLKVQAWGAGGGAGHFKGGQSGDGGGGA--FAEALLYATPDDELEVTVGGGGAAGEYGSEIE---VPGGFDDFGKAVFDMVDQHGVAEGGWPGGGSGHGGNPHWAX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREGVPGGGLNGEIPGTKMDMRNGRMGTATCGGEAGDSGDINGCTFPPEHGQAWAGGNGGQ 650          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A0N7L6Z3_PLAHL (Tnf receptor associated factor 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6Z3_PLAHL)

HSP 1 Score: 148 bits (373), Expect = 1.050e-34
Identity = 105/330 (31.82%), Postives = 143/330 (43.33%), Query Frame = 0
Query:    2 VICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAGADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEE-HCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVY----------------GPPEHGDPAVAAMDADDSAATDAIDLGMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRG-PVKGVAG 313
             +C WGC  W+ RG     HE   C RR++ C LGC +     +W         I +                      W+P  ELEE H +  C++RPA  L CR  CG V+  G+ E L   + R+ HE++ C  R+  C WP C A + A +R  HRR H+L +GIS F    V  Y+V    +QLK+Q  G G                    FVE +  V + + +  ++G+GGA G +                G      P    + A  S A          GG PGGG GHSGN   A GGGGG++S  +R G P +  AG
Sbjct: 1193 ALCRWGCEVWLPRGLTLERHECAECPRRLMICRLGCSQIMEHQQWREV------IYDHESENNEQCSHRIVFCPRECGVWLPHFELEESHFKNLCVKRPAGNLHCRLGCGQVYRGGSNELLTLEQIRIAHEEDDCELRKVKCTWPKCDAMILANERKNHRRAHLLSSGISNFVTAAVHEYKVPRDVKQLKLQAWGAGGGSGLLRNHFVGHGGGGA--FVEGICPVYSGEILYFSIGSGGAGGKFARMVEQPDDERYDFQIGEKSKKVPGGVLVSAQVSTAM---------GGHPGGGCGHSGNKESACGGGGGFTSDDIRCGRPGENAAG 1505          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A6H5L1R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1R4_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 8.170e-29
Identity = 91/241 (37.76%), Postives = 108/241 (44.81%), Query Frame = 0
Query:  151 VAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHGDPAVAAMDADDSAATDAIDL-GMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRGPVKGVAGAWMEVLVVXXXXXXXXSRDGVGGGGLSGELLGAKVDKRNGRMGGATAGGXXXXXXXXXGCSVPAEAGRKWQGGAGAE 390
            V A DR  H  +HV+RTG+  +  PG + ++V HGCR LKVQV G G                    F E LL V+ +DE+EVTVG GGAAG YG  +         D    A  D ID  G+  GGWPGGGAGH GN  WAAG GGG S VA +                                           +D RNGRMG AT GG         GC+ P E G+ W GG G +
Sbjct:    2 VMAKDRRSHSEEHVVRTGVFLYTVPGKYTFKVPHGCRSLKVQVWGAGGGAGHFKGGQSGDGGGGA--FAEALLYVTPDDELEVTVGGGGAAGEYGSEKE---VPGGFDDFGKAVFDMIDQHGVAEGGWPGGGAGHGGNPHWAAGXGGGCSMVAKKA----------------------------------------CVIDMRNGRMGTATCGGEAGDSGDINGCTFPPEHGQAWAGGNGGQ 197          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A2R5GYJ3_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYJ3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 6.530e-26
Identity = 76/195 (38.97%), Postives = 104/195 (53.33%), Query Frame = 0
Query:    1 FVICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAGADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEEHCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLG 195
            +V+C+WGC+ W+   + + +H  ERC RR L CTLGCG   R +EW                   XXXXXXXXXXXXXXE I F  +++H    C++RP P LPC+  CG     G  +      E  +HE   C  R+  C W GC A + A +   HR+ H+ R GI+ +  PG + ++V   CR L VQ+ G
Sbjct: 1193 YVLCDWGCKDWIEPAEVE-YHRLERCRRRQLPCTLGCGLVLRAEEWTLARETHETX---------XXXXXXXXXXXXXXETIRFDLMKDHLTHDCVKRPVPALPCKLGCGWKISGGLEDQDHMQWEASQHELHECALRQVRCDWLGCMAEMEARELPMHRQDHLHRLGITTWTTPGSYKWRVPRKCRSLLVQLWG 1377          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A836CFD8_9STRA (TRAF-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.760e-23
Identity = 106/271 (39.11%), Postives = 125/271 (46.13%), Query Frame = 0
Query:   13 RRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPA-GADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEEHCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYGPP-EHGDPAVAAMDADDSAATDAIDLGMTPGGWPGGG 281
            +R Q Q +HE+E C +RVL C+LGCG   RE++W A A G        XXXXXXXXXXXXXXXXXXX E+I   ++  H  R C +RP P LPCRN CG  F  GA   LQ                                              I  F EPG   + V  GC +LKVQ+ G G                    FVEV++  S   E++V VGAGGAAGVYG P E GD A                LG+  GGWPGGG
Sbjct:  934 KRDQVQHYHEAEVCVKRVLPCSLGCGVKMREEQWTAVARGRGGGKTVQXXXXXXXXXXXXXXXXXXXGEFIVHADVGAHMSRYCAKRPFPGLPCRNGCGARFDGGASSMLQ---------------------------------------------NIPTFLEPGTHPFTVPDGCFRLKVQIWGAGGGSGHQYGGRFGGSGGGGA-FVEVIMETSPGQELQVVVGAGGAAGVYGQPSEEGDEAAGI-------------LGVAEGGWPGGG 1145          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A7S2G6G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6G9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.360e-11
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:  146 GCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYG 245
            GC A V A DR EHR++H++ +GI  +  PG + Y++    RQ+KVQ+ GG XXXXX XXXXXXXXXXXX  FVE L++ +  + +EVTVGAGG AGV G
Sbjct:    2 GCSAMVPAKDRLEHRKKHIIDSGIVTYTVPGTYEYKINGNFRQVKVQIWGGXXXXXXLXXXXXXXXXXXX--FVEALVMTTPGEVLEVTVGAGGQAGVRG 99          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A7S1UB60_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB60_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.220e-10
Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 0
Query:  218 FVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHGDPAVAAMDADDSAATDAIDL-GMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRGPVKGVAGAWMEVLVVXXXXXXXXSRDGVGGGGLSG 341
            +VEVLL+V+  +++E+TVG+GG+ GV G  E    A    + + +A     +  G   GG+PGGG G+ GN VWAAGGGGGYS V  +R  + G+       LV+XXXXXXXXSR+GV GGG+ G
Sbjct:   18 YVEVLLLVTPGEKLEITVGSGGSGGVRGLREEQREAPTRENPNLAAVVSVNEQEGYAGGGYPGGGTGYGGNEVWAAGGGGGYSMV--QRHTLSGLV-----PLVIXXXXXXXXSRNGVPGGGMHG 135          
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A7S3UU61_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU61_HETAK)

HSP 1 Score: 58.5 bits (140), Expect = 1.250e-5
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    1 FVICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRR 42
            F+ICEWGC++W+  G +   H ++ C +R+L C LGCG  +R
Sbjct:  391 FMICEWGCKEWLHAGADVVLHTTQLCVKRLLPCVLGCGEQQR 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G2Y7_ECTSI2.670e-7345.26Similar to TNF receptor associated factor 4 n=1 Ta... [more]
A0A0N7L6Z3_PLAHL1.050e-3431.82Tnf receptor associated factor 4 n=1 Tax=Plasmopar... [more]
A0A6H5L1R4_9PHAE8.170e-2937.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GYJ3_9STRA6.530e-2638.97Ankyrin repeat domain-containing protein 1 n=1 Tax... [more]
A0A836CFD8_9STRA6.760e-2339.11TRAF-type domain-containing protein (Fragment) n=1... [more]
A0A7S2G6G9_9STRA3.360e-1156.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1UB60_9STRA3.220e-1048.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3UU61_HETAK1.250e-545.24Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 62..125
e-value: 2.7E-7
score: 32.8
NoneNo IPR availablePFAMPF12810Gly_richcoord: 190..424
e-value: 1.8E-8
score: 34.6
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 62..101
score: 9.373794

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7955contigP-wetherbeei_contig7955:1174..2929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7955.1.1mRNA_P-wetherbeei_contig7955.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7955 1174..2929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7955.1.1 ID=prot_P-wetherbeei_contig7955.1.1|Name=mRNA_P-wetherbeei_contig7955.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=441bp
FVICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPA
GADPDIPEQQYHEENDCPRRLVSCTYKCGEWIPFQELEEHCRRQCIRRPA
PPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGAN
VAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGGGS
GHMRGGRGPSGSGGAGAFVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHG
DPAVAAMDADDSAATDAIDLGMTPGGWPGGGAGHSGNAVWAAGGGGGYSS
VALRRGPVKGVAGAWMEVLVVAGGGGGGGSRDGVGGGGLSGELLGAKVDK
RNGRMGGATAGGEGGDSGDVSGCSVPAEAGRKWQGGAGAEFGGGGGGGWF
GGGGGGTTPGIVGGGGGGSSFVLMTAMLDQVVLQVSDRTRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF