mRNA_P-wetherbeei_contig7955.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: D7G2Y7_ECTSI (Similar to TNF receptor associated factor 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y7_ECTSI) HSP 1 Score: 254 bits (648), Expect = 2.670e-73 Identity = 172/380 (45.26%), Postives = 213/380 (56.05%), Query Frame = 1
Query: 34 VRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAGADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEEHCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHGDPAVAAMDADDSAATDAIDL-GMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRGPVKGVAGAWMEVLVVXXXXXXXXSRDGVGGGGLSGELLGAKVDKRNGRMGGATAGGXXXXXXXXXGCSVPAEAGRKWQGGAGAE 1170
VR GQE+ FHE+E+C +R+L C LGCG RE+EWL+P+ +P + XXXXXXXXXXXXXXXX EW+PF++L +H + C++RP PP+ CR CG FH G LQ+ EER++HE ELC R C W GC V A DR H +HV+RTG+ + PG + ++V HGCR LKVQ G G F E LL + +DE+EVTVG GGAAG YG D A D +D G+ GGWPGGG+GH GN WA XXXXXXXXSR+GV GGGL+GE+ G K+D RNGRMG AT GG GC+ P E G+ W GG G +
Sbjct: 279 VRLGQEKFFHETEQCCKRILPCELGCGLRMREEEWLSPSLVNPAVTCQQHHXXXXXXXXXXXXXXXXGEWLPFEDLMKHMKVSCVKRPFPPVKCRLGCGEKFHGGLHRMLQSEEERIDHEHELCPHRLLHCVWAGCEEMVMAKDRRSHSEEHVVRTGVFLYTVPGKYTFKVPHGCRSLKVQAWGAGGGAGHFKGGQSGDGGGGA--FAEALLYATPDDELEVTVGGGGAAGEYGSEIE---VPGGFDDFGKAVFDMVDQHGVAEGGWPGGGSGHGGNPHWAX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREGVPGGGLNGEIPGTKMDMRNGRMGTATCGGEAGDSGDINGCTFPPEHGQAWAGGNGGQ 650
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A0N7L6Z3_PLAHL (Tnf receptor associated factor 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6Z3_PLAHL) HSP 1 Score: 148 bits (373), Expect = 1.050e-34 Identity = 105/330 (31.82%), Postives = 143/330 (43.33%), Query Frame = 1
Query: 4 VICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAGADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEE-HCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVY----------------GPPEHGDPAVAAMDADDSAATDAIDLGMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRG-PVKGVAG 939
+C WGC W+ RG HE C RR++ C LGC + +W I + W+P ELEE H + C++RPA L CR CG V+ G+ E L + R+ HE++ C R+ C WP C A + A +R HRR H+L +GIS F V Y+V +QLK+Q G G FVE + V + + + ++G+GGA G + G P + A S A GG PGGG GHSGN A GGGGG++S +R G P + AG
Sbjct: 1193 ALCRWGCEVWLPRGLTLERHECAECPRRLMICRLGCSQIMEHQQWREV------IYDHESENNEQCSHRIVFCPRECGVWLPHFELEESHFKNLCVKRPAGNLHCRLGCGQVYRGGSNELLTLEQIRIAHEEDDCELRKVKCTWPKCDAMILANERKNHRRAHLLSSGISNFVTAAVHEYKVPRDVKQLKLQAWGAGGGSGLLRNHFVGHGGGGA--FVEGICPVYSGEILYFSIGSGGAGGKFARMVEQPDDERYDFQIGEKSKKVPGGVLVSAQVSTAM---------GGHPGGGCGHSGNKESACGGGGGFTSDDIRCGRPGENAAG 1505
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A6H5L1R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1R4_9PHAE) HSP 1 Score: 124 bits (312), Expect = 8.170e-29 Identity = 91/241 (37.76%), Postives = 108/241 (44.81%), Query Frame = 1
Query: 451 VAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHGDPAVAAMDADDSAATDAIDL-GMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRGPVKGVAGAWMEVLVVXXXXXXXXSRDGVGGGGLSGELLGAKVDKRNGRMGGATAGGXXXXXXXXXGCSVPAEAGRKWQGGAGAE 1170
V A DR H +HV+RTG+ + PG + ++V HGCR LKVQV G G F E LL V+ +DE+EVTVG GGAAG YG + D A D ID G+ GGWPGGGAGH GN WAAG GGG S VA + +D RNGRMG AT GG GC+ P E G+ W GG G +
Sbjct: 2 VMAKDRRSHSEEHVVRTGVFLYTVPGKYTFKVPHGCRSLKVQVWGAGGGAGHFKGGQSGDGGGGA--FAEALLYVTPDDELEVTVGGGGAAGEYGSEKE---VPGGFDDFGKAVFDMIDQHGVAEGGWPGGGAGHGGNPHWAAGXGGGCSMVAKKA----------------------------------------CVIDMRNGRMGTATCGGEAGDSGDINGCTFPPEHGQAWAGGNGGQ 197
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A2R5GYJ3_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYJ3_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.530e-26 Identity = 76/195 (38.97%), Postives = 104/195 (53.33%), Query Frame = 1
Query: 1 FVICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAGADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEEHCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLG 585
+V+C+WGC+ W+ + + +H ERC RR L CTLGCG R +EW XXXXXXXXXXXXXXE I F +++H C++RP P LPC+ CG G + E +HE C R+ C W GC A + A + HR+ H+ R GI+ + PG + ++V CR L VQ+ G
Sbjct: 1193 YVLCDWGCKDWIEPAEVE-YHRLERCRRRQLPCTLGCGLVLRAEEWTLARETHETX---------XXXXXXXXXXXXXXETIRFDLMKDHLTHDCVKRPVPALPCKLGCGWKISGGLEDQDHMQWEASQHELHECALRQVRCDWLGCMAEMEARELPMHRQDHLHRLGITTWTTPGSYKWRVPRKCRSLLVQLWG 1377
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A836CFD8_9STRA (TRAF-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD8_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.760e-23 Identity = 106/271 (39.11%), Postives = 125/271 (46.13%), Query Frame = 1
Query: 37 RRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPA-GADPDIPEXXXXXXXXXXXXXXXXXXXXXEWIPFQELEEHCRRQCIRRPAPPLPCRNICGVVFHAGAGEALQAAEERMEHEQELCGRRRQPCAWPGCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYGPP-EHGDPAVAAMDADDSAATDAIDLGMTPGGWPGGG 843
+R Q Q +HE+E C +RVL C+LGCG RE++W A A G XXXXXXXXXXXXXXXXXXX E+I ++ H R C +RP P LPCRN CG F GA LQ I F EPG + V GC +LKVQ+ G G FVEV++ S E++V VGAGGAAGVYG P E GD A LG+ GGWPGGG
Sbjct: 934 KRDQVQHYHEAEVCVKRVLPCSLGCGVKMREEQWTAVARGRGGGKTVQXXXXXXXXXXXXXXXXXXXGEFIVHADVGAHMSRYCAKRPFPGLPCRNGCGARFDGGASSMLQ---------------------------------------------NIPTFLEPGTHPFTVPDGCFRLKVQIWGAGGGSGHQYGGRFGGSGGGGA-FVEVIMETSPGQELQVVVGAGGAAGVYGQPSEEGDEAAGI-------------LGVAEGGWPGGG 1145
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A7S2G6G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6G9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.360e-11 Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 436 GCGANVAAIDRAEHRRQHVLRTGISEFAEPGVFAYQVAHGCRQLKVQVLGGGXXXXXXXXXXXXXXXXXXXXFVEVLLVVSANDEIEVTVGAGGAAGVYG 735
GC A V A DR EHR++H++ +GI + PG + Y++ RQ+KVQ+ GG XXXXX XXXXXXXXXXXX FVE L++ + + +EVTVGAGG AGV G
Sbjct: 2 GCSAMVPAKDRLEHRKKHIIDSGIVTYTVPGTYEYKINGNFRQVKVQIWGGXXXXXXLXXXXXXXXXXXX--FVEALVMTTPGEVLEVTVGAGGQAGVRG 99
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A7S1UB60_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB60_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.220e-10 Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 652 FVEVLLVVSANDEIEVTVGAGGAAGVYGPPEHGDPAVAAMDADDSAATDAIDL-GMTPGGWPGGGAGHSGNAVWAAGGGGGYSSVALRRGPVKGVAGAWMEVLVVXXXXXXXXSRDGVGGGGLSG 1023
+VEVLL+V+ +++E+TVG+GG+ GV G E A + + +A + G GG+PGGG G+ GN VWAAGGGGGYS V +R + G+ LV+XXXXXXXXSR+GV GGG+ G
Sbjct: 18 YVEVLLLVTPGEKLEITVGSGGSGGVRGLREEQREAPTRENPNLAAVVSVNEQEGYAGGGYPGGGTGYGGNEVWAAGGGGGYSMV--QRHTLSGLV-----PLVIXXXXXXXXSRNGVPGGGMHG 135
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Match: A0A7S3UU61_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU61_HETAK) HSP 1 Score: 58.5 bits (140), Expect = 1.250e-5 Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 1
Query: 1 FVICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRR 126
F+ICEWGC++W+ G + H ++ C +R+L C LGCG +R
Sbjct: 391 FMICEWGCKEWLHAGADVVLHTTQLCVKRLLPCVLGCGEQQR 432 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7955.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7955.1.1 >prot_P-wetherbeei_contig7955.1.1 ID=prot_P-wetherbeei_contig7955.1.1|Name=mRNA_P-wetherbeei_contig7955.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=441bp FVICEWGCRQWVRRGQEQAFHESERCTRRVLACTLGCGRNRREDEWLAPAback to top mRNA from alignment at P-wetherbeei_contig7955:1174..2929+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7955.1.1 ID=mRNA_P-wetherbeei_contig7955.1.1|Name=mRNA_P-wetherbeei_contig7955.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1756bp|location=Sequence derived from alignment at P-wetherbeei_contig7955:1174..2929+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7955:1174..2929+ >mRNA_P-wetherbeei_contig7955.1.1 ID=mRNA_P-wetherbeei_contig7955.1.1|Name=mRNA_P-wetherbeei_contig7955.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1323bp|location=Sequence derived from alignment at P-wetherbeei_contig7955:1174..2929+ (Phaeothamnion wetherbeei SAG_119_79)back to top |