prot_P-wetherbeei_contig7947.1.4 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig7947.1.4
Unique Name	prot_P-wetherbeei_contig7947.1.4
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	332

Homology

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 7.820e-70
Identity = 157/335 (46.87%), Postives = 192/335 (57.31%), Query Frame = 0

Query:    1 MRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVG---AAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            MRG GG+VIRADV+ + GGRS+GCGIVE+A  +QA +AIE L N+ELK R IFVRED  S    S  XXXXXXXXXXXXXXXX                                        +               A G R+YV NLAW   WQELKDHM+ VG V+HADV+ D  G+S+GCGIVEY+    A RAIRELNNT LGGR + VREDR++ +                              AG  RQL+VGNL ++ TW  LKD F+T G+V+RAD+M+D S+RSKGWG VRF +  EA +A+  L+G  +G R IEVRED+K
Sbjct:   33 MRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXXENLAG--RQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 365

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 3.470e-68
Identity = 160/337 (47.48%), Postives = 193/337 (57.27%), Query Frame = 0

Query:    1 MRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGR----GAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSH-RCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            MRG GG+VIRADV+ + GGRS+GCGIVE+A  +QA +AIE L N+ELK R IFVRED  S     XXXXXXXXXXXXXXXX                                        Q             GA   A G R+YV NLAW   WQELKDHM+ VG VVHADV+ D  G+S+GCGIVEY+    A RAIRELNNT LGGR + VREDR++ + R                            G    RQL+VGNL ++ TW  LKD F+T G+V+RAD+M+D S+RSKGWG VRF +  EA +A+  L+G  +G R IEVRED+K
Sbjct:  171 MRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXENLAG----RQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 503

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: W2R296_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R296_PHYPN)

HSP 1 Score: 213 bits (541), Expect = 3.770e-63
Identity = 132/324 (40.74%), Postives = 168/324 (51.85%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +    +LE  GRSKGCGIV +AT + A+ AI +L +TEL GR IFVRED  ++  S+                                                                         G RVYV NL+W+  WQELKDHMK  GTVVHADV+  A G+S+GCG+VEY T   A +AI ELNNT L GRL+ VREDR+     P GG        A A          P G+G  RQL+VGNLP+D  W QLKDLF+T GDV+RADI      RS+G+G++R+ +A++A  A+ RL+G+ I GR IEVR D +
Sbjct:   96 VELATVLEWNGRSKGCGIVTYATEEAAQNAIATLNDTELGGRKIFVREDREAQPTSTAKPKR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDRE-----PEGGSISKFAKRAAA----------PRGSGEGRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNASDAWQAIERLNGLEIEGRLIEVRLDKR 336

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A329T2W9_9STRA (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=A0A329T2W9_9STRA)

HSP 1 Score: 210 bits (535), Expect = 3.530e-62
Identity = 130/324 (40.12%), Postives = 167/324 (51.54%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +    +LE  GRSKGCG+V +AT + A+ AI +L +TEL GR IFVRED  ++  ++                                                                         G RVYV NL+W+  WQELKDHMK  GTVVHADV+  A G+S+GCG+VEY T   A +AI ELNNT L GRL+ VREDR+     P GG        A A          P G+G  RQL+VGNLP+D  W QLKDLF+T GDV+RADI      RS+G+G++R+ +A +A  A+ RL+G+ I GR IEVR D +
Sbjct:  102 VELATVLEWNGRSKGCGVVTYATEEAAQNAIATLNDTELGGRKIFVREDREAQPTAAAKPLR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDRE-----PEGGSISKFAKRASA----------PHGSGESRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDKR 342

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A484EGA9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGA9_BRELC)

HSP 1 Score: 210 bits (534), Expect = 4.840e-62
Identity = 129/322 (40.06%), Postives = 165/322 (51.24%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVRED 330
            +    +LE  GRSKGCG+V +AT + A+ AI SL +TEL GR IFVRED  S+  S+                                                                         G RVYV NL+W   WQELKDHMK VGTVVHADV+  + G+S+GCG+VEY T   A  AI ELNNT L GRL+ VREDR+           GG ++  +   + P     P   G  RQL+VGNLP+D  W QLKDLF+T GDV+RADI      RS+G+G++RF +A +A  A+ +L+G+ + GR IEVR D
Sbjct:  100 VEIATILEWNGRSKGCGVVTYATEEAAQNAIASLNDTELGGRKIFVREDRESQSVSAVKPKR--------------------------------------------------------------------GLRVYVGNLSWTVKWQELKDHMKQVGTVVHADVLELSNGRSKGCGLVEYSTEEEAALAISELNNTELEGRLIFVREDREPE---------GGSISKFVKRASAP-----PRVNGDGRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYSDGRSRGFGIIRFTNAADACQAIEQLNGLEVEGRMIEVRLD 339

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A0P1AA48_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA48_PLAHL)

HSP 1 Score: 208 bits (529), Expect = 2.700e-61
Identity = 129/324 (39.81%), Postives = 167/324 (51.54%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +    +LE  GRSKGCGI+ +AT + A+EAI +L +TEL GR IFVRED  S+  ++                                                         G+P             G RVYV NL+W   WQELKDHMK  GTVVHADV+  A G+S+GCG+VEY T   A  AI ELNNT L GRL+ VREDR+           GG ++        P       G G  RQL+VGNLP+D  W QLKDLF+T G+V+RADI      RS+G+G++R+ +A +A  A+ R++G+ + GR IEVR D K
Sbjct:  100 VETATVLEWNGRSKGCGIITYATEEAAQEAISTLNDTELGGRKIFVREDRESQFVAA---------------------------------------------------------GKPK-----------RGFRVYVGNLSWTVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYSTPEEAATAIAELNNTELDGRLIFVREDREPE---------GGSISKFAKRSNAP-----SRGNGEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTTAADAWQAIERMNGMEVEGRQIEVRLDKK 341

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: H3GHR3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR3_PHYRM)

HSP 1 Score: 204 bits (520), Expect = 5.970e-60
Identity = 124/324 (38.27%), Postives = 168/324 (51.85%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +    +LE  GRSKGCG+V +AT + A+ AI++L ++EL GR IFVRED  ++  ++                                                                         G RVYV NL+W+  WQELKDHMK  GTVVHADV+ ++ G+S+GCG+VEY T   A +AI ELNN+ L GRL+ VREDR+            GG    +A  A       P G G  RQL+VGNLP++  W QLKDLF+T G+V+RADI      RS+G+G++R+ +A +A  A+ RL+G+ I GR IEVR D +
Sbjct:  101 VELATVLEWNGRSKGCGVVTYATEEAAQNAIDTLNDSELGGRKIFVREDRETQPIAAVKPKR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEESNGRSKGCGLVEYATQDEANKAIAELNNSELEGRLIFVREDREPE----------GGSISKLAKRAAA-----PRGNGEGRQLYVGNLPWETNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDKR 341

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A3R7H492_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H492_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.610e-59
Identity = 129/324 (39.81%), Postives = 163/324 (50.31%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +    +LE  GRSKGCGIV +AT + A+ AI +L +TEL  R IFVRED  ++  ++                                                                         G RVYV NL W+  WQELKDHMK  GTVVHADV+ +A G+S+GCG+VEY T   A  AI +LNNT L GRL+ VREDR+     P GG        A  T A       P   G  RQL+VGNLP+D  W QLKDLF+T G+V+RADI      RS+G+G++R+A+   A  A+ RL+G+ I GR IEVR D K
Sbjct:  130 VELATVLEWNGRSKGCGIVTYATEEAAQNAIATLNDTELGERKIFVREDRETQAVATTKPKR--------------------------------------------------------------------GFRVYVGNLPWNVKWQELKDHMKQAGTVVHADVLEEAGGRSKGCGLVEYATEEEANNAIAQLNNTELEGRLIFVREDRE-----PEGGSI---SKFAKRTAA-------PRNGGEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYANPAHAFQAIERLNGLEIEGRLIEVRLDKK 370

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BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A225W7L9_9STRA (RNA binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W7L9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.530e-58
Identity = 129/343 (37.61%), Postives = 167/343 (48.69%), Query Frame = 0

Query:    9 IRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQ-------------------LKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +    +LE  GRSKGCG+V +AT + A+ AI +L +TEL GR IFVRED  ++  S+                                                                         G RVYV NL+W+  WQELKDHMK  GTVVHADV+ ++ G+S+GCG+VEY T   A +AI ELNNT L GRL+ VREDR+     P GG        A A          P G G  RQL+VGNLP++  W Q                   LKDLF+T GDV+RADI      RS+G+G++R+ +A +A  A+ RL+G+ I GR IEVR D +
Sbjct:   93 VELATVLEWNGRSKGCGVVTYATEEAAQNAIATLNDTELGGRKIFVREDREAQASSTAKPKR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEESNGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDRE-----PEGGSISKFAKRAAA----------PRGGGESRQLYVGNLPWETNWQQREXXXXXXXXXXXXXXXXXLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDKR 352

[Close]

BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: I2CPF4_NANGC (Rnp domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF4_NANGC)

HSP 1 Score: 191 bits (486), Expect = 8.640e-57
Identity = 107/199 (53.77%), Postives = 134/199 (67.34%), Query Frame = 0

Query:  135 VGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDR-DRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 332
            +G  GTRVYV NL+++  WQ+LKDHM+ VG VVHADV+ D  G+S+GCGIVEYD    A RAIRELNNT L GRL+ VREDR D+    P GGG+ GG ++        G GG P+ AG  RQL+VGNL ++ TW  LKD FK   DVQRA++  D   RS+G+G VRF +A EA  A   L+G ++  R IEVRED +
Sbjct:    1 MGGVGTRVYVGNLSYEVAWQDLKDHMRKVGNVVHADVLEDHEGRSKGCGIVEYDNPHGAMRAIRELNNTDLKGRLIFVREDREDKKMGGPMGGGFQGGASMHRV-----GVGGPPSAAG--RQLYVGNLDFEITWQGLKDHFKGF-DVQRAEVAYDAEGRSRGFGTVRFGTAAEAQRAQEALNGTNLNNRTIEVREDNR 191

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J8N0_9PHAE	7.820e-70	46.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGN3_ECTSI	3.470e-68	47.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
W2R296_PHYPN	3.770e-63	40.74	Uncharacterized protein n=8 Tax=Phytophthora paras...	[more]
A0A329T2W9_9STRA	3.530e-62	40.12	Uncharacterized protein n=25 Tax=Phytophthora TaxI...	[more]
A0A484EGA9_BRELC	4.840e-62	40.06	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A0P1AA48_PLAHL	2.700e-61	39.81	Rna-binding protein n=1 Tax=Plasmopara halstedii T...	[more]
H3GHR3_PHYRM	5.970e-60	38.27	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A3R7H492_9STRA	2.610e-59	39.81	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A225W7L9_9STRA	3.530e-58	37.61	RNA binding protein n=1 Tax=Phytophthora megakarya...	[more]
I2CPF4_NANGC	8.640e-57	53.77	Rnp domain-containing protein n=1 Tax=Nannochlorop...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 256..328 e-value: 5.3E-21 score: 85.8 coord: 3..55 e-value: 0.58 score: 8.7 coord: 141..213 e-value: 8.4E-21 score: 85.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..52 e-value: 5.0E-8 score: 32.7 coord: 257..325 e-value: 8.7E-21 score: 73.5 coord: 142..210 e-value: 6.7E-18 score: 64.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 255..332 score: 17.574623
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 140..217 score: 14.965146
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..59 score: 10.20669
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 131..249 e-value: 5.0E-22 score: 80.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..61 e-value: 1.6E-11 score: 46.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 250..332 e-value: 9.3E-22 score: 79.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..128
None	No IPR available	PANTHER	PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	coord: 136..331
None	No IPR available	PANTHER	PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	coord: 6..86
None	No IPR available	PANTHER	PTHR23003:SF3	FI21236P1	coord: 136..331 coord: 6..86
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..57
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 138..247
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 253..330

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig7947	contig	P-wetherbeei_contig7947:1..2763 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig7947.1.4	mRNA_P-wetherbeei_contig7947.1.4	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig7947 1..2769 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig7947.1.4 ID=prot_P-wetherbeei_contig7947.1.4|Name=mRNA_P-wetherbeei_contig7947.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=332bp
MRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGR
TIFVREDNMSRGRSSAAAAAAAARGDVAPATTGDANGGDGGGAAAAPVAI
PAPAPIPAPTAPVPAPMPQPPQGRPAFYSGRGAGVGAAGTRVYVANLAWD
TVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIREL
NNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTG
AGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLV
RFASANEAANAVVRLHGVSIGGRAIEVREDTK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf