mRNA_P-wetherbeei_contig7947.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE) HSP 1 Score: 239 bits (609), Expect = 2.410e-72 Identity = 159/337 (47.18%), Postives = 194/337 (57.57%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVG---AAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHMRG GG+VIRADV+ + GGRS+GCGIVE+A +QA +AIE L N+ELK R IFVRED S S XXXXXXXXXXXXXXXX + A G R+YV NLAW WQELKDHM+ VG V+HADV+ D G+S+GCGIVEY+ A RAIRELNNT LGGR + VREDR++ + AG RQL+VGNL ++ TW LKD F+T G+V+RAD+M+D S+RSKGWG VRF + EA +A+ L+G +G R IEVRED+K
Sbjct: 31 DHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXXENLAG--RQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 365
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.150e-70 Identity = 162/339 (47.79%), Postives = 195/339 (57.52%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGR----GAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSH-RCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHMRG GG+VIRADV+ + GGRS+GCGIVE+A +QA +AIE L N+ELK R IFVRED S XXXXXXXXXXXXXXXX Q GA A G R+YV NLAW WQELKDHM+ VG VVHADV+ D G+S+GCGIVEY+ A RAIRELNNT LGGR + VREDR++ + R G RQL+VGNL ++ TW LKD F+T G+V+RAD+M+D S+RSKGWG VRF + EA +A+ L+G +G R IEVRED+K
Sbjct: 169 DHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXXXENLAG----RQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 503
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: W2R296_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R296_PHYPN) HSP 1 Score: 216 bits (550), Expect = 1.810e-64 Identity = 136/334 (40.72%), Postives = 173/334 (51.80%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHM+ G + +LE GRSKGCGIV +AT + A+ AI +L +TEL GR IFVRED ++ S+ G RVYV NL+W+ WQELKDHMK GTVVHADV+ A G+S+GCG+VEY T A +AI ELNNT L GRL+ VREDR+ P GG A A P G+G RQL+VGNLP+D W QLKDLF+T GDV+RADI RS+G+G++R+ +A++A A+ RL+G+ I GR IEVR D +
Sbjct: 88 DHMQAAG--PVELATVLEWNGRSKGCGIVTYATEEAAQNAIATLNDTELGGRKIFVREDREAQPTSTAKPKR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDRE-----PEGGSISKFAKRAAA----------PRGSGEGRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNASDAWQAIERLNGLEIEGRLIEVRLDKR 336
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A329T2W9_9STRA (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=A0A329T2W9_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.690e-63 Identity = 134/334 (40.12%), Postives = 172/334 (51.50%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHM+ G + +LE GRSKGCG+V +AT + A+ AI +L +TEL GR IFVRED ++ ++ G RVYV NL+W+ WQELKDHMK GTVVHADV+ A G+S+GCG+VEY T A +AI ELNNT L GRL+ VREDR+ P GG A A P G+G RQL+VGNLP+D W QLKDLF+T GDV+RADI RS+G+G++R+ +A +A A+ RL+G+ I GR IEVR D +
Sbjct: 94 DHMQAAG--PVELATVLEWNGRSKGCGVVTYATEEAAQNAIATLNDTELGGRKIFVREDREAQPTAAAKPLR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDRE-----PEGGSISKFAKRASA----------PHGSGESRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDKR 342
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A484EGA9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGA9_BRELC) HSP 1 Score: 213 bits (542), Expect = 3.280e-63 Identity = 133/332 (40.06%), Postives = 169/332 (50.90%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVRED 996
DHM G + +LE GRSKGCG+V +AT + A+ AI SL +TEL GR IFVRED S+ S+ G RVYV NL+W WQELKDHMK VGTVVHADV+ + G+S+GCG+VEY T A AI ELNNT L GRL+ VREDR+ GG ++ + + P P G RQL+VGNLP+D W QLKDLF+T GDV+RADI RS+G+G++RF +A +A A+ +L+G+ + GR IEVR D
Sbjct: 92 DHMEAAGS--VEIATILEWNGRSKGCGVVTYATEEAAQNAIASLNDTELGGRKIFVREDRESQSVSAVKPKR--------------------------------------------------------------------GLRVYVGNLSWTVKWQELKDHMKQVGTVVHADVLELSNGRSKGCGLVEYSTEEEAALAISELNNTELEGRLIFVREDREPE---------GGSISKFVKRASAP-----PRVNGDGRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYSDGRSRGFGIIRFTNAADACQAIEQLNGLEVEGRMIEVRLD 339
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A0P1AA48_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA48_PLAHL) HSP 1 Score: 209 bits (531), Expect = 1.450e-61 Identity = 132/334 (39.52%), Postives = 172/334 (51.50%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
+HM+ G + +LE GRSKGCGI+ +AT + A+EAI +L +TEL GR IFVRED S+ ++ G+P G RVYV NL+W WQELKDHMK GTVVHADV+ A G+S+GCG+VEY T A AI ELNNT L GRL+ VREDR+ GG ++ P G G RQL+VGNLP+D W QLKDLF+T G+V+RADI RS+G+G++R+ +A +A A+ R++G+ + GR IEVR D K
Sbjct: 92 EHMQVAG--PVETATVLEWNGRSKGCGIITYATEEAAQEAISTLNDTELGGRKIFVREDRESQFVAA---------------------------------------------------------GKPK-----------RGFRVYVGNLSWTVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYSTPEEAATAIAELNNTELDGRLIFVREDREPE---------GGSISKFAKRSNAP-----SRGNGEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTTAADAWQAIERMNGMEVEGRQIEVRLDKK 341
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: H3GHR3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR3_PHYRM) HSP 1 Score: 208 bits (529), Expect = 2.880e-61 Identity = 128/334 (38.32%), Postives = 173/334 (51.80%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHM+ G + +LE GRSKGCG+V +AT + A+ AI++L ++EL GR IFVRED ++ ++ G RVYV NL+W+ WQELKDHMK GTVVHADV+ ++ G+S+GCG+VEY T A +AI ELNN+ L GRL+ VREDR+ GG +A A P G G RQL+VGNLP++ W QLKDLF+T G+V+RADI RS+G+G++R+ +A +A A+ RL+G+ I GR IEVR D +
Sbjct: 93 DHMQAAG--PVELATVLEWNGRSKGCGVVTYATEEAAQNAIDTLNDSELGGRKIFVREDRETQPIAAVKPKR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEESNGRSKGCGLVEYATQDEANKAIAELNNSELEGRLIFVREDREPE----------GGSISKLAKRAAA-----PRGNGEGRQLYVGNLPWETNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDKR 341
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A3R7H492_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H492_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.270e-60 Identity = 133/334 (39.82%), Postives = 168/334 (50.30%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHM+ G + +LE GRSKGCGIV +AT + A+ AI +L +TEL R IFVRED ++ ++ G RVYV NL W+ WQELKDHMK GTVVHADV+ +A G+S+GCG+VEY T A AI +LNNT L GRL+ VREDR+ P GG A T A P G RQL+VGNLP+D W QLKDLF+T G+V+RADI RS+G+G++R+A+ A A+ RL+G+ I GR IEVR D K
Sbjct: 122 DHMQAAG--PVELATVLEWNGRSKGCGIVTYATEEAAQNAIATLNDTELGERKIFVREDRETQAVATTKPKR--------------------------------------------------------------------GFRVYVGNLPWNVKWQELKDHMKQAGTVVHADVLEEAGGRSKGCGLVEYATEEEANNAIAQLNNTELEGRLIFVREDRE-----PEGGSI---SKFAKRTAA-------PRNGGEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYANPAHAFQAIERLNGLEIEGRLIEVRLDKK 370
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: A0A225W7L9_9STRA (RNA binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W7L9_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.710e-59 Identity = 133/353 (37.68%), Postives = 172/353 (48.73%), Query Frame = 1
Query: 1 DHMRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRTIFVREDNMSRGRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGRPAFYSGRGAGVGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDRDRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQ-------------------LKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
DHM+ G + +LE GRSKGCG+V +AT + A+ AI +L +TEL GR IFVRED ++ S+ G RVYV NL+W+ WQELKDHMK GTVVHADV+ ++ G+S+GCG+VEY T A +AI ELNNT L GRL+ VREDR+ P GG A A P G G RQL+VGNLP++ W Q LKDLF+T GDV+RADI RS+G+G++R+ +A +A A+ RL+G+ I GR IEVR D +
Sbjct: 85 DHMQAAGS--VELATVLEWNGRSKGCGVVTYATEEAAQNAIATLNDTELGGRKIFVREDREAQASSTAKPKR--------------------------------------------------------------------GFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEESNGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDRE-----PEGGSISKFAKRAAA----------PRGGGESRQLYVGNLPWETNWQQREXXXXXXXXXXXXXXXXXLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDKR 352
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Match: I2CPF4_NANGC (Rnp domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF4_NANGC) HSP 1 Score: 191 bits (486), Expect = 9.180e-57 Identity = 107/199 (53.77%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 409 VGAAGTRVYVANLAWDTVWQELKDHMKAVGTVVHADVITDARGQSRGCGIVEYDTATSAGRAIRELNNTMLGGRLLLVREDR-DRSHRCPPGGGYGGGMTVAMATGAIPGGGGGPTGAGPIRQLFVGNLPYDYTWNQLKDLFKTCGDVQRADIMLDVSKRSKGWGLVRFASANEAANAVVRLHGVSIGGRAIEVREDTK 1002
+G GTRVYV NL+++ WQ+LKDHM+ VG VVHADV+ D G+S+GCGIVEYD A RAIRELNNT L GRL+ VREDR D+ P GGG+ GG ++ G GG P+ AG RQL+VGNL ++ TW LKD FK DVQRA++ D RS+G+G VRF +A EA A L+G ++ R IEVRED +
Sbjct: 1 MGGVGTRVYVGNLSYEVAWQDLKDHMRKVGNVVHADVLEDHEGRSKGCGIVEYDNPHGAMRAIRELNNTDLKGRLIFVREDREDKKMGGPMGGGFQGGASMHRV-----GVGGPPSAAG--RQLYVGNLDFEITWQGLKDHFKGF-DVQRAEVAYDAEGRSRGFGTVRFGTAAEAQRAQEALNGTNLNNRTIEVREDNR 191 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7947.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7947.1.4 >prot_P-wetherbeei_contig7947.1.4 ID=prot_P-wetherbeei_contig7947.1.4|Name=mRNA_P-wetherbeei_contig7947.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=332bp MRGGGGDVIRADVLLEPGGRSKGCGIVEFATAKQAREAIESLTNTELKGRback to top mRNA from alignment at P-wetherbeei_contig7947:1..2769- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7947.1.4 ID=mRNA_P-wetherbeei_contig7947.1.4|Name=mRNA_P-wetherbeei_contig7947.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2769bp|location=Sequence derived from alignment at P-wetherbeei_contig7947:1..2769- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7947:1..2769- >mRNA_P-wetherbeei_contig7947.1.4 ID=mRNA_P-wetherbeei_contig7947.1.4|Name=mRNA_P-wetherbeei_contig7947.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=996bp|location=Sequence derived from alignment at P-wetherbeei_contig7947:1..2769- (Phaeothamnion wetherbeei SAG_119_79)back to top |