mRNA_P-wetherbeei_contig7945.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK) HSP 1 Score: 136 bits (342), Expect = 4.790e-35 Identity = 80/198 (40.40%), Postives = 118/198 (59.60%), Query Frame = 1
Query: 64 RAQRSAAATASICRRAEAAVAALASKDRFWRAIDYRLEAHVEAAVEACCKVEAVSERGGAALAWTPEVVAEVAGNLQRVAKLVAAKADHTVLARLTAAHDPTAADVDWDAKVMSLRESFSRQFATDCRRCVDKRYPPQSAAIHDTRDRFFVRVERALRVAASKHAKIEVGKTLFGKLRLD-PACIACNRPFGPQPGPG 654
R +RS+ A++CR+AE V A+ASK FW A+ RL+AH++ + CC++EA S A + +PE +AGN QRVAKLV +AD + +++ + P D DWD KV LR+ + +F K++ + DTR RF ++++A+R+A SK K++ G TLFGK PAC+AC+RPF PGPG
Sbjct: 37 RTERSSVGLAALCRQAEGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELEANSSAAHA-FSLSPEAQRYLAGNAQRVAKLVGQRADFETIRQVSTSRHPE--DEDWDTKVDQLRQKYRAEFTQGVEAYAAKQHRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPFTSDPGPG 231
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA) HSP 1 Score: 138 bits (347), Expect = 6.650e-33 Identity = 95/224 (42.41%), Postives = 121/224 (54.02%), Query Frame = 1
Query: 25 LRHQQEEWADAVRRAQRSAAATASICRRAEAAVAALASKDRFWRAIDYRLEAHVEAAVEACCKVEAVSER--------------------GGAALAWTPEVVAEVAGNLQRVAKLVAAKADHTVLARLTAAHDPTAADVDWDAKVMSLRESFSRQFATDCRRCVDKRYPPQSAAIHDTRDRFFVRVERALRVAASKHAKIEVGKTLFGKLRL-DPACIACNRPF 633
LR E ADA+ QRS A A RR E A +LASK FW + D +L AHVE +VEA + G LA P+ + +AGN QRVAKL+AAKAD+ V+ ++ A DP A DWDA+V +LR +F QF+ D R + KR P Q A R RF RV+ ALRVA SK+ G TLFG++R+ AC+AC+RPF
Sbjct: 699 LRAHAAEGADALEALQRSGVANALALRRVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLA--PDALRVLAGNTQRVAKLIAAKADYEVIRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGPAAEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPF 920
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: D8LLI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI9_ECTSI) HSP 1 Score: 121 bits (303), Expect = 4.420e-27 Identity = 78/202 (38.61%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 1 SMAVVAAALRHQQEEWADAVRRAQRSAAATASICRRAEAAVAALASKDRFWRAIDYRLEAHVEAAVEACCKVEAVSERGGAALAWTPEVVAEVAGNLQRVAKLVAAKADHTVLARLTAAHDPTAADVDWDAKVMSLRESFSRQFATDCRRCVDKRYPPQSAAIH--DTRDRFFVRVERALRVAASKHAKIEVGKTLFGKLRL 600
S+A + ALR Q E+ A V QRS+ ++ R+ EA V AL++KD FW+A+D +L AH A E C VE + + + + E A +AG++QRVAKL+A KAD+ V+ L P DWD +V LR++ R+F DCR +DK P + + R +F ++ AL+VA SK++ G TLFGK++L
Sbjct: 662 SLAHLGTALRRQGEDAAQMVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKL 863
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI) HSP 1 Score: 113 bits (282), Expect = 2.290e-24 Identity = 70/181 (38.67%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 7 AVVAAALRHQQEEWADAVRRAQRSAAATASICRRAEAAVAALASKDRFWRAIDYRLEAHVEAAVEACCKVEAVSERGGAALAWTPEVVAEVAGNLQRVAKLVAAKADHTVLARLTAAHDPTAADVDWDAKVMSLRESFSRQFATDCRRCVDKRYPPQSAAIHDTRDRFFVRVERALRVAAS 549
A VA A+R QQ+ ++ RR +R+ + + ++ E ++ L+S+D FW + +L+AH EA +A C+VEA SE T E+ +AGN QRVAKL+ KAD V+ +LTA+ + DWD +V S+R SF F + RR +D++YP RDRFFV++E+ L+V +S
Sbjct: 543 AKVATAVREQQQRREESSRRVERANLSLTLLVKKLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVEATSEEQDR-FVLTVELQQYIAGNTQRVAKLICQKADFEVIQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYPSHGPFGARNRDRFFVKLEQGLKVNSS 722
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: D7G4P4_ECTSI (Myosin-like antigen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P4_ECTSI) HSP 1 Score: 100 bits (249), Expect = 4.110e-20 Identity = 67/214 (31.31%), Postives = 112/214 (52.34%), Query Frame = 1
Query: 31 HQQEEWADAVRRAQRSAAATASICRRAEAAVAALASKDRFWRAIDYRLEAHVEAAVEACCKVEAVSERGGAALAWTPEVVAEVAGNLQRVAKLVAAKADHTVLARLTAAHDPTAADVDWDAKVMSLRESFSRQFATDCRRCVDKRYPPQSAAIHDTRDRFFVRVERALRVAASKHAKIEVGKTLFGKLRLDPACIACNRPFGPQPGPGDPRSAL 672
H + E D + +RS + + RR + ++ ALA+K+ W ++ + + HV+ +E + + P + V+ Q VAK+VA +AD+ V + +P D DWD KV LR F +F +D + K P + + R+ F ++E ++++A SK+ I+ G T+ GK+ L P+C+AC+RPF PGPGDPRS +
Sbjct: 142 HFKAENGDRMTSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEP-FSLGPAMQKHVSAVSQMVAKIVATRADYEVTRQAVNRKNP-GEDSDWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHLLPSCMACDRPFIDNPGPGDPRSVV 353
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: A0A7S3JPN6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPN6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.770e-11 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 412 ESFSRQFATDCRRCVDKRYPPQSAAIHDTRDRFFVRVERALRVAASKHAKIEVGKTLFGKLRLDPACIACNRPFGP 639
ES +F R+ +K +P + TRD F R++ L+V SKH KI+ TLFGKLRL P C+AC+RPF P
Sbjct: 1 ESAISKFIVGVRQAANKLHPTTDTKVQSTRDLFLSRLDLGLKVGISKHQKIQPNYTLFGKLRLKPTCVACDRPFAP 76
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Match: A0A8J2S9U3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9U3_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.170e-10 Identity = 58/201 (28.86%), Postives = 90/201 (44.78%), Query Frame = 1
Query: 37 QEEWADAVRRAQRSAAATASICRRAEAAVAALASKDRFWRAIDYRLEAHVEAAVEACCKVEA--VSERGGAALAWTPEVVAEVAGNLQRVAKLVAAKADHTVLARLTAAHDPTAADVDWDAKVMSLRESFSRQFATDCRRCVDKRYPPQSAAIHDTRDRFFVRVERALRVAASKHAKIEVGKTLFGKLRLDPACIACNRPF 633
+ ++ DA+ R RS A A ++ + + KD +D L+ HV + C + E+ +SER ++ +A +Q ++ +A +AD L L +P WD ++ R R F K +P TR RF R++ LRV SKH + TLFGK +L PAC+AC+RPF
Sbjct: 525 ERDYDDAMARLHRSLVAQAVAVKQIKHMAGSAVLKDMAGDRLDAILDEHVSELAKHCVEAESAVISERE---MSLPVNEQKWLAATIQHCSEALATRADLECLRGLIGHVEPPETSDLWDQQLEKNRARLLRSFCERLDEAAAKLHPTNDHMAEATRRRFNERLKLCLRVGLSKHDPVRPNMTLFGKTKLGPACVACDRPF 722 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7945.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7945.1.1 >prot_P-wetherbeei_contig7945.1.1 ID=prot_P-wetherbeei_contig7945.1.1|Name=mRNA_P-wetherbeei_contig7945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp MAVVAAALRHQQEEWADAVRRAQRSAAATASICRRAEAAVAALASKDRFWback to top mRNA from alignment at P-wetherbeei_contig7945:199..1880- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7945.1.1 ID=mRNA_P-wetherbeei_contig7945.1.1|Name=mRNA_P-wetherbeei_contig7945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1682bp|location=Sequence derived from alignment at P-wetherbeei_contig7945:199..1880- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7945:199..1880- >mRNA_P-wetherbeei_contig7945.1.1 ID=mRNA_P-wetherbeei_contig7945.1.1|Name=mRNA_P-wetherbeei_contig7945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig7945:199..1880- (Phaeothamnion wetherbeei SAG_119_79)back to top |