mRNA_P-wetherbeei_contig7939.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: A0A835Z5D7_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D7_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.850e-62 Identity = 138/298 (46.31%), Postives = 170/298 (57.05%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVELSVNATNVRGRTPLLLCFTPPHFTFSARAHGLALDPAAGLARAAAPSPEAIAAAGASGPEGLDWAAPGDPSDRQEMVRLLVEDGDADPDLQDFLGLSAVHYAAIWGWDATFRTLVDAGADAAAVTADGESCLHLAAAHGHVAAALSALDAVPRLLDCTDVAGRRAVHRAIVAGAAGSAGAGEVLALLGDEGADVNAPDFEGQTPLRLACEANVAALVLALLDAGAEAEEECLELLHGE 894
GDMR+LRE V +W+D+NR Y G + GDTLLHVVCREGY M FML P +++ +E V L VNATN +GRTPL+LCFTPP T A+A+GL DP G R A PE + A DW PGD R+ +V L+ G A + D + +HYAA+ GW + L+ AGAD + GE+ LHLA H AAA S L A P L+D +D G RA+H AI E L LL D AD+NAPD+ G TPL+LAC A V ALLD E L LL G+
Sbjct: 205 GDMRKLRECVIQRWKDVNRPYQGV-FGGDTLLHVVCREGYDGMAVFMLDPATKSAFEQVTLDVNATNKKGRTPLMLCFTPPSLTLVAKANGLEQDPEIGCGRPKAKRPEELTVA-------ADWLPPGDREARERLVERLLAAG-ARVNALDLHDYTCLHYAAMLGWVGSVEALLKAGADPGHKSVTGETALHLAIERRHGAAAESLLLASPSLVDESDRDGTRAIHTAIRCRCGR-----EFLELLADHKADMNAPDYSGVTPLQLACSLQDHAAVSALLDLKVVRESPALALLKGD 488
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: A0A6H5K2B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B1_9PHAE) HSP 1 Score: 191 bits (484), Expect = 5.200e-54 Identity = 124/286 (43.36%), Postives = 161/286 (56.29%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVELSVNATNVRGRTPLLLCFTPPHFTFSARAHGLALDPAAGLARAAAPSPEAIAAAGASGPEGLDWAAPGDPSDRQEMVRLLVEDGDADPDLQDFLGLSAVHYAAIWGWDATFRTLVDAGADAAAVTADGESCLHLAAAHGHVAAALSALDAVPRLLDCTDVAGRRAVHRAIVAGAAGSAGAGEVLALLGDEGADVNAPDFEGQTPLRLACEANVAALVLALLDAGAE 858
GDMR LRE V +KW+DINR+Y G P G+T+LH VCREGYL L+FML P S++I+ET + N N R RT L+LCFT PHFT A+ GL D GL P P A DW PG +DR+EMVR+LVED AD ++ D S +HYA+I GW+ T L++ G D GE+ LH A + H AA L L++ D G RA+H A+ G E++ LL D AD+N+P++ TPL +AC+ +V LLD AE
Sbjct: 91 GDMRLLRETVIMKWKDINRSYQG-PLLGETVLHRVCREGYLGALKFMLDPNSKSIFETETVDPNIPNKRKRTALMLCFTSPHFTEIAKHFGLEQDAETGLG---VPRPRRPDTA-------QDWMKPGTRADREEMVRILVEDLKADVNVLDMHDYSLLHYASISGWEGTIDLLLEHGIDPRQTCMTGETALHFAVSLRHGEAAEILLKRSQDLVNEADKDGDRAIHLAV------QNGDHEIVDLLVDYQADINSPNYRRVTPLAVACKRQDWQMVNHLLDKKAE 359
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: F0Y8C8_AURAN (JmjC domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8C8_AURAN) HSP 1 Score: 130 bits (328), Expect = 3.330e-30 Identity = 101/305 (33.11%), Postives = 148/305 (48.52%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVELSVNATNVRGRTPLLLCFTPPHFTFSARAHGLALDPAAGLARAAAPSPEAIAAAGASGPEGLDWAAPGDPSDRQEMVRLLVEDGDADPDLQDFLGLSAVHYAAIWGWDATFRTLVDAGADAAA----VTADGESCLHLAAAHGHVAAALSALDAVPRLLDCTDVAGRRAVHRAIVAGAAGSAGAGEVLALLGDEGADVNAPDFEGQTPLRLACEANVAALVLALLDAGAEAEEECLELLHGEAAQ 903
G+ R LRE + + +N+ Y GA + DTLLH+VCREGYL M+ FM+ P + + ++T E+ NA N + RTPL + FTPP T+ AR G+ D GL + P I + DW PG R +++ LL++ G A+ D+ S +HYA +WGW T L++ GAD A G++ L A HV L ++ +V G A+ + G E + L + GA+VNA + +PL+ AC ++ LLD A ELL G+A Q
Sbjct: 1178 GNFRELREIIIGHFAQVNKRY-GA-WDNDTLLHIVCREGYLRMVEFMVDPKNVSQFDTTEIDFNAENNKWRTPLHVVFTPPQETYCARKIGVHDD---GLPKGEKPEGVTIDS---------DWIRPGTERHRMQVIELLIDKG-ANIHQMDYHDHSPLHYACVWGWVDTVELLLEKGADPRADPETSNIAGQNALMAATEFKHVDVVDLLLSETQISIESKNVDGETALIYGALTGDV------ETVECLCEFGANVNAESYSKDSPLKRACRNQDVPMIHKLLDFAATRRPSAFELLEGDAKQ 1461
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: D7G1C5_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C5_ECTSI) HSP 1 Score: 116 bits (291), Expect = 2.300e-26 Identity = 78/200 (39.00%), Postives = 99/200 (49.50%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVELSVNATNVRGRTPLLLCFTPPHFTFSARAHGLALDPAAGLARAAAPSPEAIAAAGASGPEGLDWAAPGDPSDRQEMVRLLVEDGDADPDLQDFLGLSAVHYAAIWGWDATFRTLVDAGADAA-AVTADGESCLHLAAAHG 597
GDMR LRE V +KW+DINR+Y G P G+T+LH VCREGYL L+FML P S++I+ET + N N R RT L+LCFT PHFT + GL D GL P P P Q + LL+E G DP G +A+H+A L+ D DG+ +HLA +G
Sbjct: 91 GDMRLLRETVIMKWKDINRSYQG-PLLGETVLHRVCREGYLGALKFMLDPNSKSIFETETVDPNILNKRKRTALMLCFTSPHFTEITKNFGLEQDTETGLG---VPRPRR-------------------PDTAQGTIDLLLEHG-IDPRQTCMTGETALHFAVSLRHGEAAEILLKRSQDLVNEADKDGDRAIHLAVQNG 266
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: F0YPL7_AURAN (JmjC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPL7_AURAN) HSP 1 Score: 113 bits (282), Expect = 3.480e-24 Identity = 69/180 (38.33%), Postives = 100/180 (55.56%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVELSVNATNVRGRTPLLLCFTPPHFTFSARAHGLALDPAAGLARAAAPSPEAIAAAGASGPEGLDWAAPGDPSDRQEMVRLLVEDGDADPDLQDFLGLSAVHYAAIWGWDATFRTLVDAGAD 540
G+ R LRE + + +N+ Y GA + DTLLH+VCREGYL M+ FM+ P + + ++T E+ NA N + RTPL + FTPP T+ AR G+ D GL + P I + DW PG R +++ LL++ G A+ D+ S +HYA +WGW T L++ GAD
Sbjct: 398 GNFRELREIIIGHFAQVNKRY-GA-WDNDTLLHIVCREGYLRMVEFMVDPKNVSQFDTTEIDFNAENNKWRTPLHVVFTPPQETYCARKIGVHDD---GLPKGEKPEGVTIDS---------DWIRPGTERHRMQVIELLIDKG-ANIHQMDYHDHSPLHYACVWGWVDTVELLLEKGAD 562
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: A0A7S3JPN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPN4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.000e-7 Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVELSVNA 195
G+MR LRE V IN+ Y G + GDTLLH++CREGY M+ FM+ + + +++ E++ NA
Sbjct: 70 GNMRLLREQVVAHSTQINKKYFGG-WGGDTLLHIICREGYARMVEFMMDSNNISQFDSTEINYNA 133
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: A0A7S3M4K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4K0_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.240e-6 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 1 GDMRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSRTIYETVE 180
G+M+ LR V + +++INR Y + G+TLLH+VC+EGY ML+FM +P +R+ +T E
Sbjct: 84 GNMKELRNQVVVYFKNINRKYTDH-HLGNTLLHMVCQEGYYSMLQFMFNPANRSDLDTNE 142
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Match: A0A6U0I3R1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A6U0I3R1_MICPS) HSP 1 Score: 54.7 bits (130), Expect = 5.970e-5 Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 463 GLSAVHYAAIWGWDATFRTLVDAGADAAAVTADGESCLHLAAAHGHVAAALSALDAVPRLLDCTDVAGRRAVHRAIVAGAAGSAGAGEVLALLGDEGADVNAPDFEGQTPLRLACEANVAALVLALLDAGAEA 861
G + +H+AA G D L+ GAD V ++G++ L LAA+ GH ++ + + ++ D G A+H A A E L+ L GAD +A + G TPL LA A +V+ALLDAGA A
Sbjct: 42 GATPLHHAAEEGDDVVIEALLAIGADVDEVDSEGQTALMLAASWGHPSSVNALIRVGNASINLKDEGGDTALHEAARANEL------ETLSQLISLGADKDARNKLGATPLLLASHAGHKRIVVALLDAGAAA 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7939.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7939.2.1 >prot_P-wetherbeei_contig7939.2.1 ID=prot_P-wetherbeei_contig7939.2.1|Name=mRNA_P-wetherbeei_contig7939.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp MRRLREAVTLKWRDINRAYPGAPYYGDTLLHVVCREGYLPMLRFMLSPTSback to top mRNA from alignment at P-wetherbeei_contig7939:1006..2403+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7939.2.1 ID=mRNA_P-wetherbeei_contig7939.2.1|Name=mRNA_P-wetherbeei_contig7939.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig7939:1006..2403+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7939:1006..2403+ >mRNA_P-wetherbeei_contig7939.2.1 ID=mRNA_P-wetherbeei_contig7939.2.1|Name=mRNA_P-wetherbeei_contig7939.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig7939:1006..2403+ (Phaeothamnion wetherbeei SAG_119_79)back to top |