mRNA_P-wetherbeei_contig7936.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: A0A7S2XWE5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE5_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.010e-10 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 1 MTYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLI 174
MTY +M+ AL LK+R GSS QAIK +I+ NN+D++ FL HALR ALKKG++ G +
Sbjct: 1 MTYFDMIKAALLALKDRTGSSPQAIKAYILANNKDVK--FLQHALRAALKKGVESGKL 56
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: A0A7S4DAL4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAL4_HETAK) HSP 1 Score: 60.1 bits (144), Expect = 1.930e-9 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 MTYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPEDKKTRFKLT 213
MTY +M+++A+ LK+R GSS QAIK +I+ N D++ F HALR ALKKG++ G +E K FKL+
Sbjct: 1 MTYYDMIVKAIVALKDRTGSSPQAIKAYILANYPDVK--FAQHALRLALKKGVESGKLEKV---KASFKLS 66
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: UPI0003F06104 (sperm-specific protein PHI-2B-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06104) HSP 1 Score: 54.3 bits (129), Expect = 1.700e-7 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 10 LEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPED 189
++MV+EAL+ LK+R G S QAIK +I+T+ + T L +LR ALK G++ G++ P+D
Sbjct: 23 MDMVVEALTTLKDRKGISVQAIKTYILTHYTTVSPTHLTSSLRRALKTGLESGMLVRPKD 82
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 54.7 bits (130), Expect = 1.760e-7 Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 4 TYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPEDKKTRFKLTPEGRK 228
TY MV +A+ LKERNGSS QAIKK I + F PH +R+ALKKG++ G K +KL+ E +K
Sbjct: 7 TYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLN--FTPHQMRSALKKGVESGKFIKM---KASYKLSAEAKK 76
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 55.1 bits (131), Expect = 1.790e-7 Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 4 TYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPEDKKTRFKLTPEGRK 228
TY EM A+ LKERNGSS AIKKHI + FLPH LR ALKKG + G K +K++PE +K
Sbjct: 3 TYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLN--FLPHQLRGALKKGTETGTFIKV---KASYKVSPEAKK 72
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 56.2 bits (134), Expect = 2.010e-7 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 4 TYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPEDKKTRFKLTPEGRK 228
TY MV +A+ LKERNGSS QAIKK I + F PH +R ALKKG++ G K +KL+PE +K
Sbjct: 100 TYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLN--FTPHQMRGALKKGVESGKFIKM---KASYKLSPEAKK 169
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 2.340e-7 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 4 TYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPED--KKTRFKLTPEGRKEEVEKLG 249
TY EM +EA+ LKERNGSS AIKKHI + + TF H +R+ALKKG++ G ++ K + ++ P + +E +K G
Sbjct: 3 TYDEMTIEAVKALKERNGSSLFAIKKHITASYPSL--TFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAKPQEAQKEG 84
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 4.390e-7 Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 4 TYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQG 168
TY EM +EA+ LKERNGSS AIKKHI + + TF H LR+ALKKG++ G
Sbjct: 3 TYDEMTVEAVKALKERNGSSLFAIKKHITASYPSL--TFTGHFLRSALKKGVESG 55
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: UPI0003F066A8 (sperm-specific protein PHI-2B/PHI-3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F066A8) HSP 1 Score: 54.3 bits (129), Expect = 5.110e-7 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 10 LEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPED 189
++MV+EAL+ LK+R G S QAIK +I+T+ + T L +LR ALK G++ G++ P+D
Sbjct: 23 MDMVVEALTTLKDRKGISVQAIKAYILTHYTTVSPTHLTSSLRRALKTGLESGMLVRPKD 82
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Match: UPI0001CB9DDF (sperm-specific protein PHI-2B/PHI-3-like n=9 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9DDF) HSP 1 Score: 53.9 bits (128), Expect = 8.960e-7 Identity = 24/60 (40.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 10 LEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKKGIQQGLIEHPED 189
++M++EA+ LK+R G+S QAIK +I+T++ + + +LR A+K GI+ GL+ P+D
Sbjct: 23 MDMIVEAIQALKDRKGTSVQAIKSYILTHHSTVSPAHITSSLRRAIKSGIESGLLVRPKD 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7936.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7936.2.1 >prot_P-wetherbeei_contig7936.2.1 ID=prot_P-wetherbeei_contig7936.2.1|Name=mRNA_P-wetherbeei_contig7936.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp MTYLEMVLEALSDLKERNGSSQQAIKKHIITNNEDMENTFLPHALRTALKback to top mRNA from alignment at P-wetherbeei_contig7936:2370..2741+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7936.2.1 ID=mRNA_P-wetherbeei_contig7936.2.1|Name=mRNA_P-wetherbeei_contig7936.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig7936:2370..2741+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7936:2370..2741+ >mRNA_P-wetherbeei_contig7936.2.1 ID=mRNA_P-wetherbeei_contig7936.2.1|Name=mRNA_P-wetherbeei_contig7936.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig7936:2370..2741+ (Phaeothamnion wetherbeei SAG_119_79)back to top |