mRNA_P-wetherbeei_contig7916.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7916.1.1
Unique NamemRNA_P-wetherbeei_contig7916.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A835Z7Y1_9STRA (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.940e-20
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1 
Query:    1 SSDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAV 258
            SSDRRLKE+I PL+ +L D++ + GVRF WR  +P    +G A Q+GF+AQ+V  VFPELV    + G ++ VNY  FAPILV+ V
Sbjct:    1 SSDRRLKENIVPLSATLNDLSNIMGVRFTWREGTPEYRHSGDAPQIGFIAQNVKTVFPELVGGDEEKG-HLGVNYAAFAPILVEGV 85
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A835YYF2_9STRA (Peptidase S74 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.080e-19
Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 1 
Query:    1 SSDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNE-------QTRRLEDLLSRVAALERALE 324
            SSDRRLKE+I PL+ +L D++ + GVRF WR  +P       A Q+GF+AQ+V  VFPELV    + G  + VNY GFAPILV+ V +       Q + LE L  RV ++ER  E
Sbjct:  201 SSDRRLKENIVPLSATLNDLSHIMGVRFTWREGTPEHRRDKDAQQIGFIAQNVKTVFPELVGGDDEKGR-LGVNYAGFAPILVEGVKDLGMSNALQAQELEQLRVRVDSVERLAE 314
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A3M1JJW0_9BACT (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A3M1JJW0_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 1.980e-17
Identity = 46/113 (40.71%), Postives = 73/113 (64.60%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRVAALERALERCCGKL 342
            SDRRLK +I  + ++L+ ++QL GV+++WR+D   +    +   LGF+AQ++ RV PELV +  DG  Y +V Y G  PILV+AV EQ +++E L ++  AL  +L +   +L
Sbjct:  259 SDRRLKRNIETIPSALKTISQLRGVKYQWRQDEFPNRHFDAKTHLGFVAQEIERVLPELVSEGSDG--YKSVTYNGIMPILVEAVKEQQQQIETLQAQNEALAESLRQIQAQL 369
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A7Y7BDC8_9BACT (Tail fiber domain-containing protein n=1 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7BDC8_9BACT)

HSP 1 Score: 82.8 bits (203), Expect = 3.360e-16
Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQ-------TRRLEDLLSRVAALERALER 327
            SDRR K+DI+PL  +L  V QL G R++W  ++  +    +  Q+GF+AQ+V ++FPELV    +G  Y+++NY    P+LV+A+ EQ        + +EDL  +V  L +A+E+
Sbjct:  318 SDRRFKKDITPLNNALSSVLQLEGKRYQWDLNNVANRPFKAGDQIGFIAQEVQKIFPELVKTDSEG--YLSMNYSQLTPVLVEAIKEQQTQIDTLNKEVEDLKQKVELLLKAMEK 430
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A328BNX9_9BACT (Peptidase S74 domain-containing protein n=1 Tax=Hymenobacter edaphi TaxID=2211146 RepID=A0A328BNX9_9BACT)

HSP 1 Score: 82.8 bits (203), Expect = 3.790e-16
Identity = 46/95 (48.42%), Postives = 57/95 (60.00%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDL 288
            SD R K+D+ PLA +L  V QL GVR+RW            A Q+G LAQ+V RVFPELV     G  Y AVNY    P+L++A+ EQ R+LE L
Sbjct:  375 SDARFKQDVRPLAGALAAVQQLRGVRYRWNALGVEHGGVAGAEQVGLLAQEVERVFPELVSTDAQG--YKAVNYALLTPVLLEALKEQQRQLEQL 467
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: UPI00143E901D (tail fiber domain-containing protein n=1 Tax=Hymenobacter sp. BT18 TaxID=2835648 RepID=UPI00143E901D)

HSP 1 Score: 80.5 bits (197), Expect = 2.670e-15
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRVA 303
            SD R KE + PLA +L DV QL GVR++W              Q+G LAQ+V +VFPELV     G  Y +VNY    P+L++A+ EQ R++E+L +  A
Sbjct:  704 SDARFKEQVRPLAHALNDVLQLRGVRYQWNALGVQHGGTAGKEQIGLLAQEVEKVFPELVSTDPQG--YKSVNYAQLTPVLLEALREQQRQIEELRAGAA 801
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A7X7WP52_9BACT (Peptidase S74 domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A7X7WP52_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 4.790e-15
Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRVAALER 315
            SD RLK++I PL+ SL  + QL GV F +R D           Q+GF+AQ V  +FPELV +  DG  Y AV+Y    P+LV+A+ EQ +++E L  RV  LE+
Sbjct:  471 SDIRLKKNIVPLSGSLGKILQLQGVNFDYRTDEFPDKGFDKGRQIGFVAQQVEPLFPELVREGPDG--YKAVDYSKLVPVLVEAIKEQQKQIEQLQQRVEQLEK 572
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: UPI0019AAA90E (Uncharacterized protein n=2 Tax=Roseivirga thermotolerans TaxID=1758176 RepID=UPI0019AAA90E)

HSP 1 Score: 79.7 bits (195), Expect = 5.100e-15
Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRVAAL 309
            SD R KE ISP+  +LE++ +L G  + WR++          +Q+GF+AQDV ++FP+LV  + D   Y+++NY    P+LV+A+ EQ  ++E L   V AL
Sbjct: 1178 SDERFKESISPINGALENLLKLEGKTYYWRKEEFSDRNFSDKLQIGFIAQDVQKIFPQLV--EADEHGYLSLNYAQLTPVLVEAMKEQQTQIESLQKEVEAL 1277
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A5D6VGE7_9BACT (Tail fiber domain-containing protein n=1 Tax=Hymenobacter sp. KIGAM108 TaxID=2606448 RepID=A0A5D6VGE7_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 6.780e-15
Identity = 44/100 (44.00%), Postives = 58/100 (58.00%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRVA 303
            SD R KE + PLA +L DV QL GVR++W              Q+G LAQ+V +VFPELV     G  Y +VNY    P+L++A+ EQ R+LE L +  A
Sbjct:  706 SDARFKEQVRPLAHALNDVLQLRGVRYQWNALGVQHGGTAGKEQIGLLAQEVEKVFPELVSTDPQG--YKSVNYAQLTPVLLEALREQQRQLEVLRAGAA 803
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BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Match: A0A7Y4X0T5_9BACT (Peptidase S74 domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7Y4X0T5_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 6.840e-15
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 1 
Query:    4 SDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLAQDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRVAAL 309
            SD RLK+DI+PL  SL+ + QL G  + W+ +     AA   +Q G LAQ+V ++FPELV +  DG   +AVNY G  P+L++++ EQ +++++L   V  L
Sbjct:  858 SDARLKKDIAPLQHSLQKLIQLNGYNYNWKNE-----AADQRLQTGVLAQEVQKLFPELVTENKDG--ILAVNYSGLIPVLIESIKEQQKQIDELKKLVHQL 952
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7916.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7Y1_9STRA6.940e-2052.33Peptidase S74 domain-containing protein (Fragment)... [more]
A0A835YYF2_9STRA1.080e-1946.96Peptidase S74 domain-containing protein n=1 Tax=Tr... [more]
A0A3M1JJW0_9BACT1.980e-1740.71Peptidase S74 domain-containing protein (Fragment)... [more]
A0A7Y7BDC8_9BACT3.360e-1638.26Tail fiber domain-containing protein n=1 Tax=Cytop... [more]
A0A328BNX9_9BACT3.790e-1648.42Peptidase S74 domain-containing protein n=1 Tax=Hy... [more]
UPI00143E901D2.670e-1543.00tail fiber domain-containing protein n=1 Tax=Hymen... [more]
A0A7X7WP52_9BACT4.790e-1544.23Peptidase S74 domain-containing protein n=2 Tax=Ba... [more]
UPI0019AAA90E5.100e-1539.22Uncharacterized protein n=2 Tax=Roseivirga thermot... [more]
A0A5D6VGE7_9BACT6.780e-1544.00Tail fiber domain-containing protein n=1 Tax=Hymen... [more]
A0A7Y4X0T5_9BACT6.840e-1541.18Peptidase S74 domain-containing protein n=1 Tax=Ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7916contigP-wetherbeei_contig7916:1361..1873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog313606.M23134_01846
PFAMsPeptidase_S74
Model size345
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.94e-15
EggNOG OGsCOG2911@1|root,COG2911@2|Bacteria,4PKFD@976|Bacteroidetes,47S1V@768503|Cytophagia
DescriptionChaperone of endosialidase
Cds size345
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187009.0354073-CDS-P-wetherbeei_contig7916:1360..16301683187009.0354073-CDS-P-wetherbeei_contig7916:1360..1630Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7916 1361..1630 -
1683187009.046941-CDS-P-wetherbeei_contig7916:1798..18731683187009.046941-CDS-P-wetherbeei_contig7916:1798..1873Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7916 1799..1873 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7916.1.1prot_P-wetherbeei_contig7916.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7916 1361..1873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7916.1.1

>prot_P-wetherbeei_contig7916.1.1 ID=prot_P-wetherbeei_contig7916.1.1|Name=mRNA_P-wetherbeei_contig7916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
SSDRRLKEDISPLATSLEDVAQLAGVRFRWRRDSPLSAAAGSAVQLGFLA
QDVLRVFPELVHQQGDGGAYMAVNYPGFAPILVDAVNEQTRRLEDLLSRV
AALERALERCCGKL*
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mRNA from alignment at P-wetherbeei_contig7916:1361..1873-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7916.1.1 ID=mRNA_P-wetherbeei_contig7916.1.1|Name=mRNA_P-wetherbeei_contig7916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig7916:1361..1873- (Phaeothamnion wetherbeei SAG_119_79)
TCGTCGGACAGGCGGCTCAAGGAAGACATATCGCCACTTGCGACATCCCT
GGAGGATGTTGCGCAGCTTGCAGGGGTACGTTTTCATTTTCCTCCGGGTT
AACGCTGTTAAATTGTTTGTACCTCTCTGTCTGTATTCTCTTAATTTGAC
TCTATTTACGGCTTGCACACTAAAATCTCCGGCTAAATCGATTGTGAATT
CGTTTTCTGACAGTCCATCCTTCCGTCCTGTCGGCCCGCACAGGTTCGGT
TCCGGTGGCGGCGCGACTCCCCTCTGTCGGCCGCGGCGGGCAGCGCGGTG
CAGCTGGGCTTCCTGGCTCAAGACGTGCTGCGGGTCTTTCCTGAGCTGGT
GCACCAGCAGGGCGACGGCGGCGCATACATGGCTGTAAACTACCCGGGGT
TTGCCCCCATTCTGGTGGACGCGGTCAACGAGCAGACGCGCCGCTTAGAG
GATCTGCTGAGCAGGGTCGCCGCGCTGGAACGAGCATTGGAGAGGTGTTG
CGGGAAGCTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7916:1361..1873-

>mRNA_P-wetherbeei_contig7916.1.1 ID=mRNA_P-wetherbeei_contig7916.1.1|Name=mRNA_P-wetherbeei_contig7916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig7916:1361..1873- (Phaeothamnion wetherbeei SAG_119_79)
TCGTCGGACAGGCGGCTCAAGGAAGACATATCGCCACTTGCGACATCCCT
GGAGGATGTTGCGCAGCTTGCAGGGGTTCGGTTCCGGTGGCGGCGCGACT
CCCCTCTGTCGGCCGCGGCGGGCAGCGCGGTGCAGCTGGGCTTCCTGGCT
CAAGACGTGCTGCGGGTCTTTCCTGAGCTGGTGCACCAGCAGGGCGACGG
CGGCGCATACATGGCTGTAAACTACCCGGGGTTTGCCCCCATTCTGGTGG
ACGCGGTCAACGAGCAGACGCGCCGCTTAGAGGATCTGCTGAGCAGGGTC
GCCGCGCTGGAACGAGCATTGGAGAGGTGTTGCGGGAAGCTTTAG
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