mRNA_P-wetherbeei_contig7915.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A2K1JLR6_PHYPA (Arabinogalactan endo-beta-1,4-galactanase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JLR6_PHYPA) HSP 1 Score: 284 bits (726), Expect = 1.210e-90 Identity = 151/334 (45.21%), Postives = 208/334 (62.28%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRNRFADGATCLRRGLDAVRKGWPAARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSGVWSPSHDSSSSPLRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQGWHVPPGRALWAADGRARPAIAAFDGFA 1005
++GHDLSTV QCEK+G +Y+D D + +PPE+I+ HGA +RLRLWV+PP G+SD SVL A+R +K+LLCLHLSD WADPG P W + + L +TV YV ++ A QGTPP IVAVGNE++NG LWP G L+ + + L+ GL AV++ +MVH NNG++K++ WF+ ++ + V +++LGLSFYP D L L++SL A R KP++VVE A S W+PS + + + L +VV++VP GLG GV YWE AW+P GEAYPG+G H RALW GR PA+ ++ +A
Sbjct: 8 LLGHDLSTVLQCEKSGVKYYDF----DSSECKPPEQIVAAHGANLVRLRLWVNPPAGFSDYASVLEMAKRAK-KANLKVLLCLHLSDYWADPGKQFTPGAWANQDCKTLCKTVEEYVRYIIEALQRQGTPPFIVAVGNEVSNGILWPTGALSN--ISQFTSLLKSGLAAVKE--KGIASMVHINNGQDKDLVTWFMGMMVANHVSFNYLGLSFYPAD-------GAKLSDLKSSLETAATRYNKPMVVVEVAES--WAPSPNCPETQESLMTELLKVVSSVPRGLGAGVCYWESAWVPPGEAYPGEGCHYGY-RALWNEQGRPLPALRCYEFYA 322
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A2K1KPD6_PHYPA (Arabinogalactan endo-beta-1,4-galactanase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KPD6_PHYPA) HSP 1 Score: 270 bits (691), Expect = 8.700e-85 Identity = 153/334 (45.81%), Postives = 196/334 (58.68%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRNRFADGATCLRRGLDAVRKGWPAARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSGVWSPSHDSSSSPLRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG---WHVPPGRALWAADGRARPAIAAFD 996
++GHDLSTV QCEK G +Y+D + ++PPE+I+ HGA IRLRLWV+PP G+SDL SV A+R + +LLCLHLSD WADPG P VW + L +TV YV + V A QGTPP +VAVGNEI+NG LWP G+L+ + L+ GL AV TMVH NNG+++ + WF+DL+ + DV +DFLGLSFYP D L LE SL + A R KP+I+ E A W P+ ++ + L L +VV A+P GLG GV YWE AW EAYPG+G W RALW G PA+ F+
Sbjct: 40 LLGHDLSTVLQCEKKGLKYYDF----NSNYSKPPEQIVADHGANFIRLRLWVNPPAGFSDLSSVFEMAKRAK-KANLNILLCLHLSDYWADPGKQYTPAVWADQDFDTLRKTVADYVASTVGALQSQGTPPSMVAVGNEISNGMLWPTGSLSYT--SQFTALLKSGLAAVDND---IATMVHINNGQDEGLVTWFMDLMVADDVSFDFLGLSFYPGD-------GALLSDLETSLAKAASRYNKPMIIAEVAD--YWIPAPNNPGTQESSLDALLQVVTALPRGLGAGVCYWESAWRSPAEAYPGEGNSYWT----RALWNDLGNPLPALRCFE 350
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A838EK00_9CHLR (Arabinogalactan endo-beta-1,4-galactanase n=1 Tax=Ktedonobacteraceae bacterium TaxID=2740538 RepID=A0A838EK00_9CHLR) HSP 1 Score: 215 bits (547), Expect = 4.450e-63 Identity = 127/329 (38.60%), Postives = 176/329 (53.50%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGT--LNRNRF-ADGATCLRRGLDAVRKGWPAART--MVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAH----------------SGVWSPSHDSS-SSPLRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG 924
++GHDLST+ Q E A + + D G P ERIL HGAT++R RLWV+PP Y+DLP +L ARR+ + G+K LL +H SD WADPG P W + A LA+TV Y V+ QGTP D+V +GNEI NG LWP+G LN N++ + T L+ G+ G + MVH + G + +F D + S V++D +GLS+YP G L L+A+L +LA R + ++VVETA+ S V P + ++ L LR L ++ VP G+G+ YWE AW+PG PG G
Sbjct: 64 VLGHDLSTLQQLEDAKKTFSDHG------RVAPAERILAHHGATYVRERLWVNPPLPYNDLPHILKMARRIK-EAGLKFLLDIHYSDFWADPGHQTTPAAWQGQDLATLAKTVYSYTRDVIERLASQGTPVDMVQIGNEITNGMLWPLGEIYLNGNQYWTEFTTLLKAGIAGAHDGSRGRQPLIMVHIDRGGDNGGSKYFYDNVFSQGVDFDIIGLSYYP-------WWHGPLSALQANLNDLALRYNRDIVVVETAYPWTLADGDGYANIVNGSTVLVPGYPATPEGQLGYLRALLSIIKQVPRQHGKGLVYWESAWIPGAGWEPGAG 378
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: UPI00040869E3 (glycosyl hydrolase 53 family protein n=1 Tax=Alicyclobacillus herbarius TaxID=122960 RepID=UPI00040869E3) HSP 1 Score: 218 bits (555), Expect = 7.530e-63 Identity = 133/327 (40.67%), Postives = 173/327 (52.91%), Query Frame = 1
Query: 7 VGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRNRFADGATCL-RRGLDAVRKGWPAA---RTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAH-----------SGVWSPSHDSSSSP------LRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG 924
+G DLS E+ G + DL G ++I+RRHG ++RLRLWV+PP GY DL S L A+R+ D GMK+LL +H SD WADPG P W + + L ETV Y +VV AF QGTP D+VA+GNE+ NG LWP G +N ++ D T L + G+ V +G P R M+H + G N +C F D + V +D +GLS+YP GSL L +L LA+R K +IV ET + + VWS S S P L + L ++A VP G GVFYWEP WLPG PG G
Sbjct: 195 LGDDLSFELAEEQTGHSFTDLDG-----QVLSADQIVRRHGTNYVRLRLWVNPPGGYDDLASDLEMAKRIKRD-GMKILLDIHYSDFWADPGTQAIPAAWQGEDLSQLEETVENYTTSVVAAFARQGTPVDMVAIGNEVTNGMLWPYGKVNGDQGWDNFTALLKAGIRGVYEGSPLGFRPRIMLHVDQGGNSLVCQQFFDHMVQEGVPFDVIGLSYYP-------FWHGSLSDLRNNLDNLAQRYHKDIIVTETQYPWTLQNGDDTDNFVWSTSQLSPGYPASPVGQLSFVNDLVSILARVPDHHGAGVFYWEPEWLPGVGWEPGSG 508
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A455SU67_9CHLR (Arabinogalactan endo-beta-1,4-galactanase n=1 Tax=Thermogemmatispora argillosa TaxID=2045280 RepID=A0A455SU67_9CHLR) HSP 1 Score: 214 bits (545), Expect = 9.060e-63 Identity = 137/356 (38.48%), Postives = 184/356 (51.69%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRN---RFADGATCLRRGLDAVRKGWPAARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSGVWSPSHDSSSSP--------------------LRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG--WHVPPGRALWAADGRARPAIAAFD 996
++GHDLST+ Q E G+R+ D G P E+I+ RHGAT IR RLWV PP Y+DLP +L+ ARR+ G+ LL H SD WADP P W + LA+TV Y +V+ A QGT P+IV GNE+ G LWP G + N R+ AT L+ + AVR A MVH + G + +F D + + V++D +GLS+YP G L L+A+L +LA R GK L+VVETA+ W+ + D S P L +R + +V VP G GRG+ YWE AW+PG PG G W L+ GRA P+I ++
Sbjct: 73 VLGHDLSTLQQLEDIGKRFSDQG------RVLPAEQIVARHGATFIRERLWVQPPIPYNDLPHILTMARRIKA-AGLHFLLDFHYSDFWADPSHQTTPQSWQGQDLTTLAQTVYDYTRSVLGALARQGTLPEIVQTGNEVTAGMLWPQGQIYVNGTERWPQFATLLKAAIAAVRDTSRAIEVMVHIDRGGDNAGSRYFFDHVLAQGVDFDVIGLSYYP-------WWHGPLSALQANLNDLAPRYGKDLVVVETAYP--WTLT-DGDSEPNIVNAQTTLLPGYPPTPAGQLAYIRAVRAIVDQVPQGRGRGLVYWESAWIPGVGWEPGAGDAWD---NLTLFDRQGRALPSIRCYE 408
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A536GKB6_9CHLR (Arabinogalactan endo-beta-1,4-galactanase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536GKB6_9CHLR) HSP 1 Score: 211 bits (538), Expect = 1.670e-62 Identity = 132/354 (37.29%), Postives = 186/354 (52.54%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRN---RFADGATCLRRGLDAVRKGWPA-ARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSGVWSPSHDSSS--------------SP---LRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGG--EAYPGQGWHVPPGRALWAADGRARPAIAAFD 996
++GHDLST+ Q E +G+ + DD +P E+I+ +HGAT++R RLWV+PP YSDLP VL+ A+R+ G+K LL H SD WADPG P W + + LA TV Y V+ F QGTPPD+V GNEI NG LWP+G ++ N R+ + T L+ + AVR G A MVH + G D S ++D +GLS+YP G L L+A+L +LA R K +++VETA+ ++ S SP + +R L ++ +P LGRG+ YWE AW+PG E G W AL+ +GRA +I ++
Sbjct: 8 VLGHDLSTLQQLEDSGRTF------SDDGRIQPVEQIVAQHGATYVRERLWVNPPLPYSDLPHVLTMAKRIKA-AGLKFLLDFHYSDFWADPGKQPTPQSWQDQDLSTLAGTVYTYTRDVIERFARQGTPPDMVQTGNEITNGMLWPLGAISGNGSERWVEFTTLLKAAIAAVRDGSQQDASVMVHIDRGG---------DNAGSRHFDFDVIGLSYYP-------WWHGPLSALQANLSDLAPRYNKDIVIVETAYPWKFTNGDSERSFGGSYPVLLPGYPPSPEGQISFIRELLSLLGQLPDQLGRGLVYWESAWIPGAGLEQDTGDTWGD---MALFDHEGRALSSIKCYE 335
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A328V9R9_9CHLR (Arabinogalactan endo-beta-1,4-galactanase n=5 Tax=Thermogemmatispora TaxID=768669 RepID=A0A328V9R9_9CHLR) HSP 1 Score: 209 bits (533), Expect = 2.190e-61 Identity = 132/349 (37.82%), Postives = 181/349 (51.86%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRN---RFADGATCLRRGLDAVRKGWPAARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAH-----SGVWSPSHDSSSSPL------------RCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG--WHVPPGRALWAADGRARPAI 984
++GHDLST+ Q E G+ + D G P E+I+ HGAT IR RLWV PP Y+DLP +L+ A R+ G+ LL H SD WADP P W + A LA+TV Y +V+ A QGT P++V GNE+ G LWP G + N R+ AT L+ + AVR + MVH + G + +F D + + V++D +GLS+YP G L L+A+L +LA R GK L+VVETA+ G P+ ++ +PL +R + +V VP G GRG+ YWE AW+PG PG G W L+ GRA P+I
Sbjct: 38 VLGHDLSTLQQLEDVGKHFSDHG------RVLPAEQIVAHHGATFIRERLWVQPPIPYNDLPHILTMAHRIKA-AGLHFLLDFHYSDFWADPSHQTTPQSWQGQDLATLAQTVYDYTRSVLGALARQGTLPEMVQTGNEVTAGMLWPQGQIYVNGTERWPQFATLLKAAIAAVRDTSRSIEVMVHIDRGGDNAGSRYFFDHILAQGVDFDVIGLSYYP-------WWHGPLSALQANLNDLAPRYGKDLVVVETAYPWTLTDGDSEPNIVNAQTPLLPGYPPTPEGQLAYIRTVRAIVEGVPQGRGRGLVYWESAWIPGVGWEPGAGDAWD---NMTLFDRQGRALPSI 369
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A1I5NDA7_9ACTN (Arabinogalactan endo-beta-1,4-galactanase n=2 Tax=Actinomadura madurae TaxID=1993 RepID=A0A1I5NDA7_9ACTN) HSP 1 Score: 211 bits (538), Expect = 8.540e-61 Identity = 136/328 (41.46%), Postives = 170/328 (51.83%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRNRFA--DG-ATCLRRGLDAVRKG-WPAARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSG-----------VWS-----PSHDSSSSPLRC-LRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG 924
I+GHDLS Q + AG RY D G PPERIL HGA ++RLRLWV+PP GYSDL SVL+ ARR GMKLLL H SD WADP P VW + ALA TV Y V+ QGTP D++ +GNEI NG LWP G ++ + DG T LR R P +VH + G + F D + + V +D +GLS+YP G+L L A+L +LA R + + VVET + +W P + +S R L L VAAVPGG G GVFYW+P W+PG PG+G
Sbjct: 157 IIGHDLSFAVQEKAAGARYTDRG------RTAPPERILASHGANYVRLRLWVNPPAGYSDLESVLTMARRAKA-AGMKLLLDPHYSDFWADPQKQPIPEVWAGQDLPALAATVRAYTRDVLDRLRAQGTPADMLQLGNEIRNGMLWPAGQIDWSAGTGWDGLGTLLRAAAAGARDAAGPTPTLVVHFDQGGDNAWSRSFFDHIVAQRVPFDVIGLSYYP-------FWHGTLSDLRANLDDLASRYRRDVAVVETQYGWTLANGDDLGNFLWQESQLVPGYPASPDGQRAFLSDLLSAVAAVPGGRGAGVFYWQPEWIPGVGWAPGEG 470
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A3D9VDS4_THECX (Arabinogalactan endo-beta-1,4-galactanase n=1 Tax=Thermasporomyces composti TaxID=696763 RepID=A0A3D9VDS4_THECX) HSP 1 Score: 206 bits (524), Expect = 1.080e-59 Identity = 128/337 (37.98%), Postives = 171/337 (50.74%), Query Frame = 1
Query: 1 AIVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRN-----RFADGATCLRRGLDAVRKGWPAA---RTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSGVWS---------------PSHDSSSSP------LRCLRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG 924
++ G D+S Q E G + DL G P ERILR +G TH+RLR+W DPPPGYSDL S L RR G+++LL LH SD WADPG P W + LAETV Y VV AFV Q TP D++ +GNEI +G L P+G L +++ T L+ G+ R+G P A R M+H + G + WF D + + V +D +GLS+YP G L L+++L +LA R K ++VVETA+ W+ P D ++ P L E++ VP G G G F +EP WLPG PG G
Sbjct: 47 SVRGADISFTLQEEAVGNQVRDLHG-----RVRPIERILRAYGGTHVRLRVWTDPPPGYSDLDSALELGRRAH-RAGLRILLNLHYSDFWADPGKQPTPVAWRGQDLPTLAETVRRYTREVVAAFVRQRTPVDMIQIGNEITSGMLHPVGELYPTDGRPPQWSAFTTLLKAGITGAREGAPRAHRPRVMLHIDRGGDNGGARWFFDHMVEFGVPFDIIGLSYYP-------IWHGPLVALQSNLHDLAARYDKDIVVVETAYP--WTTENGDELTNFYTGEVPLPDEATYPPTPQGQAGYFEALREILLGVPRGRGLGFFDFEPGWLPGVGWEPGAG 368
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Match: A0A850JU78_9ACTN (Arabinogalactan endo-beta-1,4-galactanase n=1 Tax=Actinomadura sp. BRA 177 TaxID=2745202 RepID=A0A850JU78_9ACTN) HSP 1 Score: 208 bits (529), Expect = 1.770e-59 Identity = 131/328 (39.94%), Postives = 167/328 (50.91%), Query Frame = 1
Query: 4 IVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRLWVDPPPGYSDLPSVLSFARRVVVDEGMKLLLCLHLSDTWADPGANRAPTVWHSLEPAALAETVGIYVETVVRAFVDQGTPPDIVAVGNEIANGFLWPIGTLNRNRFADG---ATCLRRGLDAVRKG-WPAARTMVHCNNGENKEMCGWFIDLLASYDVEYDFLGLSFYPEDCRGHCCCEGSLRLLEASLVELARRTGKPLIVVETAHSG-----------VWS-----PSHDSSSSPLRC-LRRLAEVVAAVPGGLGRGVFYWEPAWLPGGEAYPGQG 924
I+GHDLS Q + AG RY D G A PPERIL HGA ++RLRLWV+PP GYSDL SVL+ ARR GMKLLL H SD WADP P W + LA TV Y V+ QGTP D++ +GNEI NG LWP G ++ + T LR R P R +VH + G + F D + + V +D +GLS+YP G+L L A++ +LA R + + VVET + +W P + + R L L +VAAVP G G GVFYW+P W+PG PG+G
Sbjct: 157 IIGHDLSFAVQEKTAGARYTDHG------RAAPPERILAAHGANYVRLRLWVNPPAGYSDLESVLTMARRAKA-AGMKLLLDPHYSDFWADPQKQPVPEAWADQDLPTLANTVRTYTRDVLNRLRAQGTPADMLQLGNEIRNGMLWPTGQIDWSAGTGWDALGTLLRAAAAGARDAAGPTPRLVVHFDQGGDNAWSRTFYDHIVAQRVPFDVIGLSYYP-------FWHGTLSDLRANMNDLAARYRRDVAVVETQYGWTLDNGDDLGNFLWQESQLVPGYPADPDGQRAFLSDLLSIVAAVPDGRGAGVFYWQPEWIPGVGWAPGEG 470 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7915.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7915.1.1 >prot_P-wetherbeei_contig7915.1.1 ID=prot_P-wetherbeei_contig7915.1.1|Name=mRNA_P-wetherbeei_contig7915.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=342bp AIVGHDLSTVPQCEKAGQRYFDLGGGDDDTTAEPPERILRRHGATHIRLRback to top mRNA from alignment at P-wetherbeei_contig7915:776..2017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7915.1.1 ID=mRNA_P-wetherbeei_contig7915.1.1|Name=mRNA_P-wetherbeei_contig7915.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1242bp|location=Sequence derived from alignment at P-wetherbeei_contig7915:776..2017- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7915:776..2017- >mRNA_P-wetherbeei_contig7915.1.1 ID=mRNA_P-wetherbeei_contig7915.1.1|Name=mRNA_P-wetherbeei_contig7915.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig7915:776..2017- (Phaeothamnion wetherbeei SAG_119_79)back to top |