mRNA_P-wetherbeei_contig790.6.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA) HSP 1 Score: 290 bits (743), Expect = 7.680e-95 Identity = 144/219 (65.75%), Postives = 182/219 (83.11%), Query Frame = 1
Query: 1 KEHEAAIHETMSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFQTGEIYHAAHELLVLVDEFRELLDRLFSWCDLCLPAQEQAFAESHRQKIQRFQTQLVAEMKRSNSARSQVTQLLSARVDTLRQLLSTKDIKPENLEAWEKAHHDLLTLQESNSYLSMGRLWEQILESYLLLFNYWKVNLKSENFVFGDNGKSSGNDYFA 657
K +E IH+TM+ F ++R+ R++++Y+VFKL++EKD ARERRQKV F+ F ++SR NSFQTG +Y HE+LV +DEFRELLD+LFSWCDLCLPA EQ+FAESHR KIQ+FQ Q+V EMKR+NSAR+QV L+ RV+TLRQL +TK++ NLE WEKAH +LLTLQESN+YL MGR WEQ+LESYLLL+NYW +NLK ++ VFGD G+SSGNDYFA
Sbjct: 43 KVYEKNIHQTMTKFLDLRQSRKEEMYKVFKLISEKDHARERRQKV-FEHFRDNISRVNSFQTGTVYEVTHEVLVFIDEFRELLDKLFSWCDLCLPANEQSFAESHRLKIQKFQMQIVNEMKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYFA 260
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Match: D8LE75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE75_ECTSI) HSP 1 Score: 283 bits (723), Expect = 1.570e-92 Identity = 145/219 (66.21%), Postives = 173/219 (79.00%), Query Frame = 1
Query: 1 KEHEAAIHETMSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFQTGEIYHAAHELLVLVDEFRELLDRLFSWCDLCLPAQEQAFAESHRQKIQRFQTQLVAEMKRSNSARSQVTQLLSARVDTLRQLLSTKDIKPENLEAWEKAHHDLLTLQESNSYLSMGRLWEQILESYLLLFNYWKVNLKSENFVFGDNGKSSGNDYFA 657
K +E +H+TM+ FPE+R++R+ D YRVFKL++EKD ARERR+KV F++FN +SR+N+FQTGEIY + ELL+LVDEFRELLDRLFSWCDLCLP +QAFAESHRQKIQ+FQ Q+V EMKRSNSARSQ ++ NLEAWEKAHHDLLT QE+N+YL MGR WEQILES LLL+NYWKVNLK +N VFGD GKS+GNDYFA
Sbjct: 13 KVYEKNLHDTMAEFPELRKQRKIDYYRVFKLMDEKDNARERRRKV-FEYFNGAISRQNNFQTGEIYEVSRELLMLVDEFRELLDRLFSWCDLCLPGNDQAFAESHRQKIQKFQVQIVQEMKRSNSARSQ-------------------EVDGGNLEAWEKAHHDLLTSQEANAYLQMGRSWEQILESLLLLYNYWKVNLKDDNIVFGDAGKSTGNDYFA 211
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Match: A0A835YMR0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR0_9STRA) HSP 1 Score: 199 bits (505), Expect = 5.240e-59 Identity = 104/217 (47.93%), Postives = 143/217 (65.90%), Query Frame = 1
Query: 7 HEAAIHETMSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFQTGEIYHAAHELLVLVDEFRELLDRLFSWCDLCLPAQEQAFAESHRQKIQRFQTQLVAEMKRSNSARSQVTQLLSARVDTLRQLLSTKDIKPENLEAWEKAHHDLLTLQESNSYLSMGRLWEQILESYLLLFNYWKVNLKSENFVFGDNGKSS-GNDYF 654
+E IHETM +FP +R RR+D R L D AR+RR KV F FFN HVS+ NSFQT E++ + E+L ++DE RE L+ + +WCDLCLPA E AFAE+HR K+Q FQ L + ++ ++V L R TL+ L +TKD+ PEN W +AH DLL E+N+YL + ++WE++LE Y+L +NYWK N+K + FG+ GKS G+DYF
Sbjct: 37 YETNIHETMKTFPTLRECRRQDYNRCITLFALADHARDRRNKV-FAFFNSHVSQPNSFQTDEVFRVSEEVLSVLDESREQLELVTNWCDLCLPANETAFAEAHRLKLQDFQDYLSGGVTGIVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYF 252
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Match: D7G572_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G572_ECTSI) HSP 1 Score: 196 bits (498), Expect = 4.160e-57 Identity = 104/218 (47.71%), Postives = 136/218 (62.39%), Query Frame = 1
Query: 1 KEHEAAIHETMSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFQTGEIYHAAHELLVLVDEFRELLDRLFSWCDLCLPAQEQAFAESHRQKIQRFQTQLVAEMKRSNSARSQVTQLLSARVDTLRQLLSTKDIKPENLEAWEKAHHDLLTLQESNSYLSMGRLWEQILESYLLLFNYWKVNLKSENFVFGDNGKSSGNDYF 654
K +EA IH+ M P R RR+KD RV L A++RR KV F++F++ V++ N FQ E+Y + +LL ++DE RE L+ L +WCDLCLPA EQAFAE+HR KIQ FQ L A + S + + L R TLR L STKD+ PEN E W + H ++L E N+YLS WE++LE YLL +NY+K+NLK VF GK GNDYF
Sbjct: 103 KVYEANIHDMMKQMPAQRERRKKDFERVLTLFASDSLAKDRRNKV-FEYFDKAVTKANCFQVKEVYSVSQDLLSVLDEARETLELLVNWCDLCLPANEQAFAEAHRIKIQHFQDYLSAGLSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYF 319
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.400e-50 Identity = 97/219 (44.29%), Postives = 137/219 (62.56%), Query Frame = 1
Query: 1 KEHEAAIHETMSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFQTGEIYHAAHELLVLVDEFRELLDRLFSWCDLCLPAQEQAFAESHRQKIQRFQTQLVAEMKRSNSARSQVTQLLSARVDTLRQLLSTKDIKPENLEAWEKAHHDLLTLQESNSYLSMGRLWEQILESYLLLFNYWKVNLKSENFVFGDNGKSS-GNDYF 654
K +E IHETM P++R +D + L + D+A++RR KV F FF+ +++ S+QT +++ + E+L ++DE RELL+ L +WCDLCLPA E AFAE+ R KIQ FQ L + ++ ++V L R TL+ L +TKD+ PEN W KAH DLL E+N+YL M ++WE++LE Y+L FNYWK NLK + F GK G DYF
Sbjct: 26 KVYERNIHETMQELPKLRDACEQDYTKCVTLFSTDDSAKDRRTKV-FAFFDANITEATSYQTDQVFKLSEEVLSVLDECRELLELLMNWCDLCLPANETAFAEALRIKIQDFQEYLSGGVTGLANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKGERGGDYF 243
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Match: D8LEA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA5_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.970e-50 Identity = 94/218 (43.12%), Postives = 136/218 (62.39%), Query Frame = 1
Query: 1 KEHEAAIHETMSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFQTGEIYHAAHELLVLVDEFRELLDRLFSWCDLCLPAQEQAFAESHRQKIQRFQTQLVAEMKRSNSARSQVTQLLSARVDTLRQLLSTKDIKPENLEAWEKAHHDLLTLQESNSYLSMGRLWEQILESYLLLFNYWKVNLKSENFVFGDNGKSSGNDYF 654
K +E +HETM+ P +R +R D +F L++ D AR RR+KV+ DFF ++EN + G+I +H+ LVL+DE REL+DRL SW +CLPA + + SHR+K++ F+ +L E+K RS VT S RV T+R + TKD+ NL WE AHH+LL +QE+ +YLSM R W ++S LL++ YWKVNLK + F +G+ +F
Sbjct: 27 KTYERNVHETMAGLPGLREKRLADYESIFTLVDANDTARARRRKVL-DFFMTR-TKENLNRAGQIQECSHQCLVLIDELRELMDRLISWLTMCLPANDHPLSVSHRRKLKLFKGRLRNEVKILEGLRSGVTSAHSGRVHTIRSMFLTKDVAENNLLGWETAHHELLVMQETEAYLSMCRFWMSTMDSALLVYKYWKVNLKDADIAFATGNNGNGHHHF 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig790.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig790.6.3 >prot_P-wetherbeei_contig790.6.3 ID=prot_P-wetherbeei_contig790.6.3|Name=mRNA_P-wetherbeei_contig790.6.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp MSSFPEIRRRRRKDLYRVFKLLNEKDAARERRQKVVFDFFNQHVSRENSFback to top mRNA from alignment at P-wetherbeei_contig790:6145..8179- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig790.6.3 ID=mRNA_P-wetherbeei_contig790.6.3|Name=mRNA_P-wetherbeei_contig790.6.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2035bp|location=Sequence derived from alignment at P-wetherbeei_contig790:6145..8179- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig790:6145..8179- >mRNA_P-wetherbeei_contig790.6.3 ID=mRNA_P-wetherbeei_contig790.6.3|Name=mRNA_P-wetherbeei_contig790.6.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig790:6145..8179- (Phaeothamnion wetherbeei SAG_119_79)back to top |