mRNA_P-wetherbeei_contig79.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: UPI001F3A0635 (nucleoside hydrolase n=1 Tax=Membranicola sp. C281 TaxID=2904244 RepID=UPI001F3A0635) HSP 1 Score: 56.2 bits (134), Expect = 6.440e-7 Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 1
Query: 91 VTKRRVWLDTDTSAGRARLATAAFIRIFSHYSSMFHTHAGLPGKDVDDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
+TK+++W+DTD S G R HT G DVDD A+L +KSP ++++G+S VFGN +E + + Q
Sbjct: 1 MTKQKIWIDTDLSVGMKR-----------------HTREGYC--DVDDGYAVLQLMKSPEVDIIGISAVFGNTLIENAYGLCQ 64
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: A0A5S9IQ58_9BACT (Ribosylpyrimidine nucleosidase n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9IQ58_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 1.270e-6 Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 205 AGLPGKDVDDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
AG+ +DVDDALALL +SP + +VG+SVVFGNA L++ + IA+
Sbjct: 31 AGIEYRDVDDALALLQAFRSPELNIVGISVVFGNASLKEGYPIAK 75
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: A0A835ZEH1_9STRA (Inosine/uridine-preferring nucleoside hydrolase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH1_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 8.100e-6 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 229 DDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
DDAL LL CI SP++ELVGVSV FGNA L + DIA+
Sbjct: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIAR 37
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: UPI001C06E421 (nucleoside hydrolase n=2 Tax=Zobellia TaxID=112040 RepID=UPI001C06E421) HSP 1 Score: 52.8 bits (125), Expect = 1.090e-5 Identity = 28/83 (33.73%), Postives = 42/83 (50.60%), Query Frame = 1
Query: 91 VTKRRVWLDTDTSAGRARLATAAFIRIFSHYSSMFHTHAGLPGKDVDDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
+TK++VW+DTD S G R + DVDD A+L IK+ +IE+ G+S VFGN +E + ++Q
Sbjct: 1 MTKKKVWIDTDLSVGMTREKREGYC-------------------DVDDGYAVLQLIKADTIEVCGISAVFGNTVIENSYPLSQ 64
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: UPI00188DB410 (nucleoside hydrolase n=1 Tax=Zobellia roscoffensis TaxID=2779508 RepID=UPI00188DB410) HSP 1 Score: 51.6 bits (122), Expect = 2.800e-5 Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 1
Query: 91 VTKRRVWLDTDTSAGRARLATAAFIRIFSHYSSMFHTHAGLPGKDVDDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
+TK++VW+DTD S G R + + DVDD A+L +K+ +IE+ G+S VFGN ++ + ++Q
Sbjct: 1 MTKKKVWIDTDLSVGMTREKRSGYC-------------------DVDDGYAVLQLMKADTIEICGISAVFGNTPIKNSYPLSQ 64
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: UPI001FE38D2D (nucleoside hydrolase n=2 Tax=Zobellia TaxID=112040 RepID=UPI001FE38D2D) HSP 1 Score: 51.2 bits (121), Expect = 3.830e-5 Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 1
Query: 97 KRRVWLDTDTSAGRARLATAAFIRIFSHYSSMFHTHAGLPGKDVDDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
K++VW+DTD S G R H G DVDD A+L IK+ +IE+ G+S VFGN +E + ++Q
Sbjct: 3 KKKVWIDTDLSVGMTR-----------------HKREGYC--DVDDGYAVLQLIKADTIEICGISAVFGNTIIENSYPLSQ 64
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Match: UPI001F5CFD09 (nucleoside hydrolase n=1 Tax=Vibrio vulnificus TaxID=672 RepID=UPI001F5CFD09) HSP 1 Score: 50.4 bits (119), Expect = 8.300e-5 Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 1
Query: 97 KRRVWLDTDTSAGRARLATAAFIRIFSHYSSMFHTHAGLPGKDVDDALALLHCIKSPSIELVGVSVVFGNAELEQQFDIAQ 339
K+RVW+DTD SAG + G P DVDDA A+L SP++ ++GV VFGN +++ +AQ
Sbjct: 229 KKRVWIDTDISAGAT-------------------SETGKPC-DVDDAYAMLSLFNSPNVRVMGVGTVFGNTDVDTAHKLAQ 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig79.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig79.5.1 >prot_P-wetherbeei_contig79.5.1 ID=prot_P-wetherbeei_contig79.5.1|Name=mRNA_P-wetherbeei_contig79.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp MSATIRSLSLFLLFSHSATFGLEETPKAAPVTKRRVWLDTDTSAGRARLAback to top mRNA from alignment at P-wetherbeei_contig79:14608..14946+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig79.5.1 ID=mRNA_P-wetherbeei_contig79.5.1|Name=mRNA_P-wetherbeei_contig79.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig79:14608..14946+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig79:14608..14946+ >mRNA_P-wetherbeei_contig79.5.1 ID=mRNA_P-wetherbeei_contig79.5.1|Name=mRNA_P-wetherbeei_contig79.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig79:14608..14946+ (Phaeothamnion wetherbeei SAG_119_79)back to top |