mRNA_P-wetherbeei_contig7894.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 1.320e-139 Identity = 175/264 (66.29%), Postives = 206/264 (78.03%), Query Frame = 3
Query: 63 ELFLVSFLSLLLAPLEANGGCALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSALA 854
+ FL+ S + ++ N GC+L NWCNGHG+C+TGT TCTCYEGWGADTD+TLYRA DCS+RVCP+GKAWG +PT AH E ECS G+CD+ +GEC CF GF GA+C RS CP+ CS HGRC +MK +A SDALPLS+VTTYSGE+D TWDE+M++GCVCDS W+VGLG+G+TQ PEWFGPDCSLRHCPSGDDP+T DETDCFNVT V+ AG GNLCH DCS RG CDY GLC+CF GYYG NC +S LA
Sbjct: 5 KFFLLLVSSWIFTTVQGNAGCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLYRAADCSARVCPAGKAWGDVPTGSLSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSGEDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQSVLA 268
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 322 bits (825), Expect = 1.170e-107 Identity = 138/231 (59.74%), Postives = 171/231 (74.03%), Query Frame = 3
Query: 141 CNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNC 833
CNGHG C+T T TCTC+EG+GA TDV +Y+APDCS RVCP+G +WGG+PT ET AH AECS+ G+CD+ +G+C C+ G+ G++C RS C N CSGHGRC SM+ MAT++ A PLS TY G ED TWD++ ++GC+CDSSW VGLGSG+ Q EWFGPDCSL CP+GDDP T DETDC T S+ G+ GN CH DC+ RG+CDY G C CF G+YG+NC
Sbjct: 5 CNGHGRCNTATKTCTCFEGYGAATDVAVYKAPDCSQRVCPAGPSWGGIPTDETVAHALAECSDMGVCDRSSGQCKCYRGYEGSACQRSTCLNGCSGHGRCVSMREMATITSAFPLSPAATYEGAEDTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKTA--TDSTSVGQPGNRCHVDCANRGICDYTSGTCMCFSGFYGSNC 233
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A7S1CQ07_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ07_9STRA) HSP 1 Score: 322 bits (826), Expect = 3.500e-107 Identity = 152/272 (55.88%), Postives = 180/272 (66.18%), Query Frame = 3
Query: 66 LFLVSFLSLLLAPLEANGGCALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPL---SDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVT--GIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSALAVTKK 866
L L ++ LA G C CNGHG+C+T T+ C CY+GWG+ +DVT YRAPDCS RVCPSG AW T+ AH AECSNAGICD+ TG+C CF+G+ G +C RS CPN CSGHG+C S+ MA+ ++A P+ S TY G E ATWDED ++GCVCDSSW V L SG TQ PEWFG DCSLRHC SGDDP T DETDC G V G GNLCH DC+ RG+C+Y G+C CFDG+YG C L+S LAV K
Sbjct: 11 LVLAVAVAAALAGRADAGACVDLGDCNGHGTCNTATTQCACYDGWGSSSDVTTYRAPDCSKRVCPSGNAWADAATATNTAHALAECSNAGICDRTTGKCRCFTGYDGEACQRSACPNECSGHGKCVSIAQMASENNAQPVDIESPAFTYGGSEAVATWDEDKIFGCVCDSSWTVSLASGATQEPEWFGADCSLRHCASGDDPMTTADETDCVGKVRNGQTVAGRTGGVAGNLCHVDCANRGICNYNTGICDCFDGFYGVACTLQSELAVGDK 282
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP) HSP 1 Score: 320 bits (819), Expect = 3.180e-106 Identity = 140/244 (57.38%), Postives = 173/244 (70.90%), Query Frame = 3
Query: 123 CALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSALA 854
CA + CN HG CD T TC C EG+GA TD+T YR+PDCS R CP+G +WGG+PTS T +H +AECS+AG+CD+ TG C C+ G+ G++C RS CPN CSGHG+C SM+ +AT + A PLS TTY G+ TWD+D + GC+CDS W VGLG+GE+Q +WFGPDCS HCPSGDDP T EDETDC V + G GNLCH DC+ RG+CDY G+C CF G+YG+NC S LA
Sbjct: 35 CAALSNCNAHGRCDALTKTCECNEGYGASTDITNYRSPDCSLRTCPAGPSWGGIPTSATTSHAKAECSDAGVCDRSTGTCMCYYGYEGSACQRSTCPNGCSGHGQCLSMRELATETSAFPLSPATTYGGDVTATTWDQDRIQGCLCDSYWPVGLGAGESQLSQWFGPDCSRMHCPSGDDPMTAEDETDCEGV--VAAGGVGPGAAGNLCHVDCANRGICDYSSGVCSCFPGFYGSNCASLSPLA 276
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: W2Q018_PHYPN (EGF-like domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q018_PHYPN) HSP 1 Score: 316 bits (810), Expect = 7.130e-105 Identity = 145/270 (53.70%), Postives = 181/270 (67.04%), Query Frame = 3
Query: 48 CCVSVELFLVSFLSLLLAPLEANGG--CALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSAL 851
C V +F+++ L+ A L G CA N CN HG CD T TCTCYEG+GA TD+T YR+PDCS R+CP+G +WGG+PTS T +H + ECS AG+CD+ TG C C+ GF G++C RS CPNSCSGHG+C SM+ +A A PLS T Y G+ TWD+D + GC+CDSSW VGLG+GE+Q ++FGPDCS HCPSGDDP T DETDC V + G NLCH DC+ RG+C+Y G C CF G+YG+NC S L
Sbjct: 7 CTTLVCVFVIAICPLVRAQLGVPTGNLCAALNNCNAHGRCDALTKTCTCYEGFGAPTDITNYRSPDCSLRICPAGPSWGGIPTSATISHPKEECSGAGVCDRTTGTCICYYGFEGSACQRSSCPNSCSGHGQCLSMRELAAAPSAFPLSPPTKYEGDVTATTWDQDRIQGCLCDSSWPVGLGAGESQLSQYFGPDCSRMHCPSGDDPMTAVDETDCEGV--VADGGGGTGAPDNLCHVDCANRGICNYNSGECSCFSGFYGSNCASLSPL 274
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA) HSP 1 Score: 314 bits (804), Expect = 5.060e-104 Identity = 150/275 (54.55%), Postives = 184/275 (66.91%), Query Frame = 3
Query: 42 AYCCVSVELFLVSFLSLLLAPLEANGG--CALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCS--SRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSALA 854
A+ C+ V ++ +L A L G CA N CN HG CD T TCTCYEG+GA TDVT YR+PDCS +R CP+G +WGG+PTS T +H +AECS AGICD+ +G C C+ G+ G++C RS CPNSCSGHG+C SM+ MA S A PLS T Y G+ TWD+D + GC+CDSSW VGLG+GE+Q ++FGPDCS HCPSGDDP T DETDC + I G NLCH DC+ RG+CDY G C CF G+YG+NC S LA
Sbjct: 3 AFLCLGV----IASCTLTCAQLGVPTGNLCASLNNCNAHGRCDALTKTCTCYEGFGAPTDVTNYRSPDCSLRTRTCPAGPSWGGIPTSATTSHPKAECSGAGICDRSSGTCICYYGYEGSACQRSSCPNSCSGHGQCLSMREMAMESSAFPLSPPTKYEGDVTATTWDQDRIQGCLCDSSWPVGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGI--IAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYGSNCASLSPLA 271
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A835YN50_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN50_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.660e-102 Identity = 145/259 (55.98%), Postives = 173/259 (66.80%), Query Frame = 3
Query: 120 GCALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLS-DVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDP--------NTYEDETDCFNVTGI----FVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSALAV 857
GC HN CNGHG C + C CYEGWGAD+D++LY+A DCS+RVCPSG AWG +PT++ AH ECS G+CD+ +G C CF+GF G +C R CPN+CSGHGRC S+K M +ALPLS + Y G+E TWDED ++GCVCDSSW VGL + ETQA EWFGPDCSLRHCPSG+DP + E N G+ V G GNLCH DCSGRGVCDY G+C+CF+GYYG NC LAV
Sbjct: 38 GCDQHNNCNGHGVCSQQDAVCLCYEGWGADSDISLYKAQDCSARVCPSGPAWGDVPTAKYTAHAALECSGMGLCDRDSGVCRCFTGFEGDACQRMACPNNCSGHGRCMSLKNMVNEPNALPLSSNAHEYGGDELATTWDEDRIFGCVCDSSWAVGLKATETQAVEWFGPDCSLRHCPSGNDPAQLQLTPAHPAEKPILTINCEGVATPGVVEKDSEGAEGNLCHVDCSGRGVCDYATGVCQCFNGYYGQNCGTVDVLAV 296
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A8J2X5G2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G2_9STRA) HSP 1 Score: 307 bits (786), Expect = 1.940e-101 Identity = 148/260 (56.92%), Postives = 170/260 (65.38%), Query Frame = 3
Query: 78 SFLSLLLAPLEANGGCALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDP-NTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSALA 854
S + LLL P A G C N+CNGHG C+ T TC CYEGWGA TDV LY+ DCS R CPSG AW + + AH AECS G C++ TG C C SGF G +C R C CSGHG+C SMK MATM +ALPLS TY+G E WD+D +YGCVCDSSW VGLG G+ Q PEWFGP CSLRHCPSGDDP T+ DET+C VT + GE GNLC DC+ RG CD G C C+ G YG++C L SALA
Sbjct: 4 SLVLLLLRPTRA-GDCIDMNFCNGHGHCEPATDTCDCYEGWGAKTDVALYKLHDCSGRTCPSGPAWADVASDSKTAHAPAECSGKGTCNKATGTCKCVSGFSGDACQRFGCLYDCSGHGQCVSMKKMATMPNALPLSKPATYTGLETTERWDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVTAAGGYG--VGEKGNLCQVDCANRGKCDTETGECSCWTGSYGHDCTLLSALA 260
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A833WEK2_PHYIN (EGF-like domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WEK2_PHYIN) HSP 1 Score: 307 bits (787), Expect = 2.190e-101 Identity = 140/270 (51.85%), Postives = 176/270 (65.19%), Query Frame = 3
Query: 48 CCVSVELFLVSFLSLLLAPLEANGG--CALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNCNLRSAL 851
C V V + + L+ L G CA N CN HG CD T TCTCYEG+GA TD+T YR+PDCS R CP+G +WGG+P S T +H + ECS AG+CD+ TG C C+ G+ G++C RS CPNSCSGHG+C SM+ +A A PLS T Y G+ TWD+D + GC+CDS+W VGLG+GE+Q ++FGPDCS HCPSGDDP T DET C + + + G NLCH DC+ RG+CDY G C CF G+YG+NC S L
Sbjct: 7 CAVLVYVVASAICPLVRGQLGVPTGNLCAALNNCNAHGRCDALTKTCTCYEGFGAPTDITNYRSPDCSMRTCPAGPSWGGIPNSATTSHPKEECSGAGVCDRNTGTCFCYYGYEGSACQRSSCPNSCSGHGQCMSMRELAVEPSAFPLSPPTKYEGDVRATTWDQDRIQGCLCDSTWPVGLGAGESQLSQYFGPDCSKMHCPSGDDPMTAVDETKCVGI--VATGGAGTGGPDNLCHVDCANRGICDYNTGECSCFSGFYGSNCASLSPL 274
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Match: A0A5D6XZL0_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZL0_9STRA) HSP 1 Score: 307 bits (786), Expect = 2.220e-101 Identity = 133/237 (56.12%), Postives = 169/237 (71.31%), Query Frame = 3
Query: 123 CALHNWCNGHGSCDTGTSTCTCYEGWGADTDVTLYRAPDCSSRVCPSGKAWGGLPTSETEAHVEAECSNAGICDQITGECTCFSGFVGASCGRSECPNSCSGHGRCASMKTMATMSDALPLSDVTTYSGEEDGATWDEDMVYGCVCDSSWDVGLGSGETQAPEWFGPDCSLRHCPSGDDPNTYEDETDCFNVTGIFVHSSFAGETGNLCHNDCSGRGVCDYRVGLCKCFDGYYGNNC 833
C+ + CNGHG C T + TC C+EG+GA +D+T Y++PDCS RVCPSG +W G+PT+ AH ECS+AG CD+ +G+C CF+G+ GA+C R CPN CSGHG+C SM+ MA +++A PLS TTY+G E TWD++ ++GCVCDSSWDVGL +G+ Q+ +WFG DCSL CPSGDDP T DETDC + GETGN CH DCS RG CDY G C CF G+YG+NC
Sbjct: 24 CSALSNCNGHGRCVTASKTCICFEGYGATSDITSYKSPDCSKRVCPSGPSWAGIPTAANSAHPRTECSDAGYCDRSSGQCRCFAGYDGAACQRYACPNGCSGHGQCVSMQAMAELTNAAPLSAATTYAGAEATTTWDQNRIFGCVCDSSWDVGLAAGQRQSSQWFGADCSLMRCPSGDDPMTTVDETDCGGK--LAPGGVGTGETGNKCHIDCSNRGKCDYTTGTCACFSGFYGSNC 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7894.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7894.1.1 >prot_P-wetherbeei_contig7894.1.1 ID=prot_P-wetherbeei_contig7894.1.1|Name=mRNA_P-wetherbeei_contig7894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp MKEPTLWTAYCCVSVELFLVSFLSLLLAPLEANGGCALHNWCNGHGSCDTback to top mRNA from alignment at P-wetherbeei_contig7894:258..1200- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7894.1.1 ID=mRNA_P-wetherbeei_contig7894.1.1|Name=mRNA_P-wetherbeei_contig7894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=943bp|location=Sequence derived from alignment at P-wetherbeei_contig7894:258..1200- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7894:258..1200- >mRNA_P-wetherbeei_contig7894.1.1 ID=mRNA_P-wetherbeei_contig7894.1.1|Name=mRNA_P-wetherbeei_contig7894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig7894:258..1200- (Phaeothamnion wetherbeei SAG_119_79)back to top |