mRNA_P-wetherbeei_contig12916.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12916.1.1
Unique NamemRNA_P-wetherbeei_contig12916.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: UPI001664085C (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polaromonas eurypsychrophila TaxID=1614635 RepID=UPI001664085C)

HSP 1 Score: 542 bits (1396), Expect = 4.330e-193
Identity = 269/323 (83.28%), Postives = 299/323 (92.57%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALPGLARAQA-YPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+LL+AAPALL LP L+RAQA YP+K+IRYIVPVSAGGGSDMVGRTVTERWG LL Q FVVDNQGGGGGVIA QA ARAAPDGYTL+QGYVATHGTSPATRKLPYD IKDFTPIGMIGGTPNVLVVNA+LPVNN++EF+ Y+++NPG+VSYGSAG GSLTHLTMELFKQQI +FMVHIPYRG+APAFTDL+GGQTQAMFPGLAAA+PHIRSGRVRPLAVTGL RH Q KD+PTLDESGFKGFDA QWYGVVGPAGMP  IVKQLNDTLA+VL+APDLREKLSVEA+EPQ MT E+FG +++AD+ARWT++AR R I+LDS
Sbjct:    1 MKRRTLLQAAPALLGLPSLSRAQAAYPSKAIRYIVPVSAGGGSDMVGRTVTERWGNLLKQNFVVDNQGGGGGVIACQAAARAAPDGYTLLQGYVATHGTSPATRKLPYDAIKDFTPIGMIGGTPNVLVVNASLPVNNIREFIDYVKKNPGKVSYGSAGQGSLTHLTMELFKQQIASFMVHIPYRGIAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLQRHPQFKDLPTLDESGFKGFDAQQWYGVVGPAGMPAPIVKQLNDTLATVLRAPDLREKLSVEAIEPQVMTPEQFGNFIKADIARWTQLARARGIQLDS 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: A0A3C0YDK2_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=4 Tax=unclassified Polaromonas TaxID=2638319 RepID=A0A3C0YDK2_9BURK)

HSP 1 Score: 541 bits (1395), Expect = 6.140e-193
Identity = 268/323 (82.97%), Postives = 297/323 (91.95%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALPGLARAQA-YPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+LL+AAPAL+  PGLA AQ  YP+K IRYIVPVSAGGGSDMVGRTVTERWG +L Q+F+VDNQ GGGGVIA QATARA PDGYTLMQGYVATHGTSPATRKLPYD +KDFTPIGMIGGTPNVLVVNAALPV N+KEF+AYLR+NPG+VSYGSAG GSLTHLTMELFKQQI++FMVHIPYRG+APAFTDL+GGQTQAMFPGLAAA+PHIRSGRVRPLAVTGL RH  +KDVPTLDESGFKGFDA QWYGVVGPAGMP  IVKQLN+TLA+VL+APDLREKLSVEA+EP  MT E+FG +++AD+ARWTK+ARER I+LDS
Sbjct:    1 MKRRTLLQAAPALICAPGLALAQTGYPSKPIRYIVPVSAGGGSDMVGRTVTERWGNVLKQSFIVDNQAGGGGVIACQATARAVPDGYTLMQGYVATHGTSPATRKLPYDAVKDFTPIGMIGGTPNVLVVNAALPVKNVKEFIAYLRKNPGKVSYGSAGAGSLTHLTMELFKQQINSFMVHIPYRGIAPAFTDLIGGQTQAMFPGLAAALPHIRSGRVRPLAVTGLQRHPMLKDVPTLDESGFKGFDAQQWYGVVGPAGMPAPIVKQLNETLATVLRAPDLREKLSVEAIEPMVMTPEQFGEFIRADIARWTKLARERGIQLDS 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: A0A353Y1P2_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A353Y1P2_9BURK)

HSP 1 Score: 534 bits (1376), Expect = 4.810e-190
Identity = 263/323 (81.42%), Postives = 297/323 (91.95%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALP-GLARAQAYPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+LL+A PA L +P GLARAQAYPAK IRYIVPV+AGGGSDMVGRTVTERWG+LLNQ+FVVDNQGGGGGVIA QATARAAPDGYTL+QGYVATHGTSPATRKLPYDP+KDFTP+GMIGGTPNVLVVNAALPVNN+KEFV YLR N G+VSYGSAG GSLTHLTMELFKQQI+AFMVHIPYRG+APAFTDL+GGQTQAMFPGLAAA+PHIR GRVR LAVTG  RH Q+KD PTLDE G+KGFDAMQWYGVVGPAGMPP IVKQLN+TL +VL+APD+R+KLS+EA+EP PM+ E FG++++ D+ARWT++A+ R I+LDS
Sbjct:    1 MKRRTLLQALPASLLIPAGLARAQAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGKLLNQSFVVDNQGGGGGVIACQATARAAPDGYTLLQGYVATHGTSPATRKLPYDPVKDFTPVGMIGGTPNVLVVNAALPVNNVKEFVDYLRANTGKVSYGSAGAGSLTHLTMELFKQQINAFMVHIPYRGIAPAFTDLIGGQTQAMFPGLAAALPHIRGGRVRALAVTGNQRHPQLKDTPTLDELGYKGFDAMQWYGVVGPAGMPPPIVKQLNETLNTVLQAPDMRDKLSIEAIEPLPMSPERFGQFVREDIARWTQLAKARGIQLDS 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: A0A0R0MJR9_9BURK (Receptor n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A0R0MJR9_9BURK)

HSP 1 Score: 527 bits (1358), Expect = 2.470e-187
Identity = 262/322 (81.37%), Postives = 292/322 (90.68%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALPGLARAQAYPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+LL A+P LLA P L  AQ+YP K IRYIVPV+AGGGSDMVGRTVTERWG+ L QTFVVDNQGGGGGVIASQ TA+AAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAA+P  ++KEFVAYLR N G+VSYGSAG GSLTHLTMELFKQQID+FMVHIPYRGVAPAFTDL+GGQTQAMFPGLAAA+PHIRSGRVR LAVTG  RH Q+KD PTLDE G+KGFDAMQWYGVVGPA MP AIVKQLNDTL +VLKAPD+REKLS+EA+EP PM+A+ FG++M+ D+ARWT++A++R I+LDS
Sbjct:    1 MKRRTLLGASPLLLA-PTLLHAQSYPVKPIRYIVPVAAGGGSDMVGRTVTERWGKALGQTFVVDNQGGGGGVIASQNTAKAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAAIPAKDVKEFVAYLRANLGKVSYGSAGAGSLTHLTMELFKQQIDSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAALPHIRSGRVRALAVTGAQRHPQLKDTPTLDELGYKGFDAMQWYGVVGPAQMPAAIVKQLNDTLNAVLKAPDMREKLSIEAIEPMPMSADAFGKFMREDIARWTRLAKDRNIQLDS 321          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: Q12E21_POLSJ (Uncharacterized protein UPF0065 n=6 Tax=Polaromonas TaxID=52972 RepID=Q12E21_POLSJ)

HSP 1 Score: 526 bits (1354), Expect = 1.080e-186
Identity = 261/323 (80.80%), Postives = 295/323 (91.33%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALPGLARAQA-YPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+LL+AAPAL+  PGLA AQA YPAK IRYIVPV+AGGGSDMVGRTVTERWG  L Q+F+VDNQGGGGGVIA+QATARAAPDGYTLMQGYVATHGTSPATR+LPYD +KDFT IGMIG TPNVLVVNAALPV  +KEF+ Y+R+NPG+VSYGSAG GSLTHLTMELFKQQI++FMVHIPYRGVAPAFTDL+GGQTQAMFPGLAAA+PHIRSGRVRPLAVTGL RH Q KD+PTLDESGFKGFDA QWYGVVGPAGMP  IVKQLN++LA+VLKAPDLREKL+VEA+EP  M+ E+F  +++AD+ RWTK+A++R+IELDS
Sbjct:    1 MKRRTLLQAAPALIYAPGLAFAQAAYPAKPIRYIVPVAAGGGSDMVGRTVTERWGIQLKQSFIVDNQGGGGGVIAAQATARAAPDGYTLMQGYVATHGTSPATRRLPYDAVKDFTAIGMIGATPNVLVVNAALPVTTVKEFIEYVRKNPGKVSYGSAGQGSLTHLTMELFKQQINSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAAVPHIRSGRVRPLAVTGLTRHPQFKDLPTLDESGFKGFDAQQWYGVVGPAGMPAPIVKQLNESLATVLKAPDLREKLAVEAIEPMVMSPEQFAAFIKADIVRWTKLAKDRKIELDS 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: A0A2N2RP69_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-3 TaxID=2013715 RepID=A0A2N2RP69_9PROT)

HSP 1 Score: 521 bits (1343), Expect = 5.300e-185
Identity = 254/324 (78.40%), Postives = 292/324 (90.12%), Query Frame = 1
Query:    1 MHRRSLLRAAPA--LLALPGLARAQAYPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR LL+A PA  LL   G  RAQAYP+++IRYIVPVSAGGGSDMVGRTVT+RW R L Q+FVVDNQGGGGGVIA QAT RAAPDGYTL+QGYVATHGTSPATRKLPYDPIKDFT +GMIGGTPNVLVVN+  PVNN+KEFV YLR+NPGR+SYGSAG GSLTHLTMELFKQQID+FMVHIPYRGVAPAFTDL+GGQTQAMFPGLAAAMPHIR GRV+PLAVTG  RH  +KD PTLDE GFKGFDAMQWYGV+GPAG+P A+V QLNDTL +VLKAPD+R+KLS+EA++P PM++E+FG++++AD+ARWT++AR+R I+LD+
Sbjct:    1 MQRRHLLQAVPAALLLGAAGSTRAQAYPSRAIRYIVPVSAGGGSDMVGRTVTDRWSRQLGQSFVVDNQGGGGGVIACQATTRAAPDGYTLLQGYVATHGTSPATRKLPYDPIKDFTMVGMIGGTPNVLVVNSQTPVNNVKEFVDYLRKNPGRLSYGSAGQGSLTHLTMELFKQQIDSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAAMPHIRGGRVKPLAVTGAVRHPLLKDTPTLDELGFKGFDAMQWYGVMGPAGLPAAVVAQLNDTLNTVLKAPDMRDKLSIEAIDPMPMSSEQFGQFVRADIARWTRLARDRHIQLDA 324          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: UPI001BE8555C (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI001BE8555C)

HSP 1 Score: 519 bits (1337), Expect = 4.190e-184
Identity = 258/323 (79.88%), Postives = 287/323 (88.85%), Query Frame = 1
Query:    1 MHRRSL-LRAAPALLALPGLARAQAYPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+L L   PALL L G   AQAYPA+ IRYIVPVSAGGGSDMVGRTVTERWG+LLNQTFVV+NQ GGGGVIASQ TARA  DGYTLMQGYVATHGTSPATRKLPYDP+KDFTPIGMIGGTPNVLVVN+ LP  + K+FVAYL+ NP +VSYGSAG GSLTHLTMELFKQQ+  FMVH+PYRG+APAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTG  RH Q+K+ PTL+E G KGFDAMQWYGVVGPAGMP  +V+QLN+TL +VLKAPDL EKLSVEAVEP PM+AE+FG YM+AD+ARWT++ARER+I+LD+
Sbjct:    1 MQRRTLVLVLPPALLVLSGRLHAQAYPARPIRYIVPVSAGGGSDMVGRTVTERWGKLLNQTFVVENQAGGGGVIASQNTARAPADGYTLMQGYVATHGTSPATRKLPYDPVKDFTPIGMIGGTPNVLVVNSELPARDFKQFVAYLKGNPSKVSYGSAGAGSLTHLTMELFKQQVGVFMVHVPYRGIAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGNTRHPQLKEAPTLEELGLKGFDAMQWYGVVGPAGMPADVVRQLNETLNAVLKAPDLSEKLSVEAVEPMPMSAEQFGAYMRADIARWTELARERKIQLDN 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: UPI0019AF3177 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019AF3177)

HSP 1 Score: 518 bits (1333), Expect = 1.700e-183
Identity = 257/323 (79.57%), Postives = 291/323 (90.09%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALPGLARAQ-AYPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR+LLR APAL   PG+A AQ AYP K IRYIVPV+AGGGSDMVGR++TERWG LL Q FVV+NQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYD ++DFT IGMIG TPNVLVVNA LPV  ++EFV Y+++NPGRVSYGSAG GSLTHLTMELFKQQID+FMVHIPYRGVAPAFTDL+GGQTQAMFPGLAAA+PHIRSGRVRPLAVTGL RH Q KD+PTLDESGFKGFDA QWYGVVGPAGMP  IV+QLN+TLA+VL+APDLR+KL+VEA+EP  M+ EEF  +++ D+ARWT++A++R+IELDS
Sbjct:    1 MQRRTLLRTAPALFCAPGMAWAQPAYPGKPIRYIVPVAAGGGSDMVGRSLTERWGILLKQPFVVENQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDAVRDFTAIGMIGATPNVLVVNAGLPVRTVREFVDYVKKNPGRVSYGSAGQGSLTHLTMELFKQQIDSFMVHIPYRGVAPAFTDLIGGQTQAMFPGLAAAIPHIRSGRVRPLAVTGLRRHPQFKDLPTLDESGFKGFDAQQWYGVVGPAGMPAPIVRQLNETLATVLRAPDLRDKLAVEAIEPVVMSPEEFSAFIKNDIARWTQLAKDRKIELDS 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: A0A1F8W4J2_9BURK (Receptor n=1 Tax=Curvibacter sp. GWA2_64_110 TaxID=1797747 RepID=A0A1F8W4J2_9BURK)

HSP 1 Score: 517 bits (1331), Expect = 3.430e-183
Identity = 255/323 (78.95%), Postives = 291/323 (90.09%), Query Frame = 1
Query:    1 MHRRSLLRAAPA-LLALPGLARAQAYPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RR LL+A PA LL    LA+ Q+YP+K IRYIVPV+AGGGSDMVGRTVT+RW ++L QTFVVDNQGGGGGVIASQ TA+AAPDGYTLMQGYVATHGTSPATRKLPYDP+ DF+P+GMIGGTPNVLVVNA LPV ++KEF+ YLR +PG+VSYGSAG GSLTHLTMELFKQQI++FMVHIPYRG+APAFTDL+GGQTQAMFPGLAAA+PHIRS RVR LAVTGL RH Q+KDVPTLDE GFKGFDAMQWYGVVGPAGMP AIVKQLNDTL +VL APDLREKL+VEA+EP PM+A +FG++++ D+ARWT++ARER I LD+
Sbjct:    1 MKRRELLQALPAALLTTSSLAQTQSYPSKPIRYIVPVAAGGGSDMVGRTVTDRWAKVLKQTFVVDNQGGGGGVIASQNTAKAAPDGYTLMQGYVATHGTSPATRKLPYDPVHDFSPVGMIGGTPNVLVVNADLPVRSVKEFMDYLRAHPGKVSYGSAGAGSLTHLTMELFKQQINSFMVHIPYRGIAPAFTDLIGGQTQAMFPGLAAALPHIRSNRVRALAVTGLQRHPQLKDVPTLDELGFKGFDAMQWYGVVGPAGMPAAIVKQLNDTLNTVLAAPDLREKLAVEAIEPMPMSAAQFGQFIRTDIARWTRLARERNIHLDN 323          
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Match: A0A1M7LRP4_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Rhizobacter sp. OV335 TaxID=1500264 RepID=A0A1M7LRP4_9BURK)

HSP 1 Score: 512 bits (1319), Expect = 2.220e-181
Identity = 255/323 (78.95%), Postives = 285/323 (88.24%), Query Frame = 1
Query:    1 MHRRSLLRAAPALLALPGLARAQA-YPAKSIRYIVPVSAGGGSDMVGRTVTERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSPATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGRVSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAMFPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWYGVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGRYMQADLARWTKVARERRIELDS 966
            M RRSLL AA AL ALP  A+AQ+ +P K +RYIVPV+AGGGSDM+GRTVTERWG LL QT VVDNQGGGGGVIA Q TA AAPDGYTLMQGYV THGTSPATRKLPYD +KDFTPIGMIG TPNVLVVNA LPV  LKEF+ YL++NPG+V+YGSAGPGSLTHLTMELFKQQ+D+FMVH+PYRG+APAFTDL+GGQTQAMFPGLAAAMPH+RSG VR LAVTG  RH Q KDVPTL+ESGFKGFDAMQWYGVVGPAGMP  IV+QLN+TLA+VLKAPDLREKL+VEAVEP PMT  +FG YM+ D+ARW K+A+ R I+LD+
Sbjct:    1 MKRRSLLHAA-ALSALPAFAQAQSRFPNKPLRYIVPVAAGGGSDMIGRTVTERWGVLLGQTIVVDNQGGGGGVIAGQTTAHAAPDGYTLMQGYVGTHGTSPATRKLPYDAVKDFTPIGMIGATPNVLVVNAQLPVKTLKEFIDYLKKNPGKVAYGSAGPGSLTHLTMELFKQQVDSFMVHVPYRGIAPAFTDLIGGQTQAMFPGLAAAMPHLRSGSVRALAVTGTKRHPQAKDVPTLEESGFKGFDAMQWYGVVGPAGMPETIVRQLNETLATVLKAPDLREKLAVEAVEPTPMTPAQFGDYMRNDIARWAKLAKARNIQLDN 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12916.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001664085C4.330e-19383.28tripartite tricarboxylate transporter substrate bi... [more]
A0A3C0YDK2_9BURK6.140e-19382.97Tripartite tricarboxylate transporter substrate bi... [more]
A0A353Y1P2_9BURK4.810e-19081.42Tripartite tricarboxylate transporter substrate bi... [more]
A0A0R0MJR9_9BURK2.470e-18781.37Receptor n=2 Tax=Comamonadaceae TaxID=80864 RepID=... [more]
Q12E21_POLSJ1.080e-18680.80Uncharacterized protein UPF0065 n=6 Tax=Polaromona... [more]
A0A2N2RP69_9PROT5.300e-18578.40Tripartite tricarboxylate transporter substrate bi... [more]
UPI001BE8555C4.190e-18479.88tripartite tricarboxylate transporter substrate bi... [more]
UPI0019AF31771.700e-18379.57Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F8W4J2_9BURK3.430e-18378.95Receptor n=1 Tax=Curvibacter sp. GWA2_64_110 TaxID... [more]
A0A1M7LRP4_9BURK2.220e-18178.95Tripartite-type tricarboxylate transporter, recept... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12916contigP-wetherbeei_contig12916:375..1343 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog296591.Bpro_1270
PFAMsTctC
Model size969
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.77e-187
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VIGV@28216|Betaproteobacteria,4AB4M@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size969
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185966.3099322-CDS-P-wetherbeei_contig12916:374..13431683185966.3099322-CDS-P-wetherbeei_contig12916:374..1343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12916 375..1343 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12916.1.1prot_P-wetherbeei_contig12916.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12916 375..1343 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12916.1.1

>prot_P-wetherbeei_contig12916.1.1 ID=prot_P-wetherbeei_contig12916.1.1|Name=mRNA_P-wetherbeei_contig12916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MHRRSLLRAAPALLALPGLARAQAYPAKSIRYIVPVSAGGGSDMVGRTVT
ERWGRLLNQTFVVDNQGGGGGVIASQATARAAPDGYTLMQGYVATHGTSP
ATRKLPYDPIKDFTPIGMIGGTPNVLVVNAALPVNNLKEFVAYLRQNPGR
VSYGSAGPGSLTHLTMELFKQQIDAFMVHIPYRGVAPAFTDLMGGQTQAM
FPGLAAAMPHIRSGRVRPLAVTGLARHAQVKDVPTLDESGFKGFDAMQWY
GVVGPAGMPPAIVKQLNDTLASVLKAPDLREKLSVEAVEPQPMTAEEFGR
YMQADLARWTKVARERRIELDS*
back to top

mRNA from alignment at P-wetherbeei_contig12916:375..1343-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12916.1.1 ID=mRNA_P-wetherbeei_contig12916.1.1|Name=mRNA_P-wetherbeei_contig12916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig12916:375..1343- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACCGCCGCTCCCTGCTGCGCGCCGCCCCCGCGCTGCTGGCCCTGCC CGGCCTCGCCCGCGCGCAGGCCTACCCCGCCAAGTCCATCCGCTACATCG TGCCGGTATCGGCCGGCGGCGGCAGCGACATGGTGGGCCGCACCGTGACC GAGCGCTGGGGCCGGCTGCTGAACCAGACCTTCGTGGTGGACAACCAGGG CGGCGGCGGCGGCGTGATCGCCAGCCAGGCCACGGCGCGCGCCGCGCCCG ACGGCTACACGCTGATGCAGGGCTACGTGGCCACGCACGGCACCAGCCCG GCCACGCGCAAGCTGCCCTACGACCCGATCAAGGACTTCACCCCCATCGG CATGATCGGCGGCACCCCCAACGTGCTGGTGGTCAACGCCGCACTGCCGG TGAACAACCTCAAGGAGTTCGTCGCCTACCTGCGGCAGAACCCGGGCAGG GTCAGCTACGGCTCGGCCGGGCCGGGATCTCTGACGCACCTGACGATGGA GCTGTTCAAGCAGCAGATCGATGCCTTCATGGTCCACATTCCCTACCGCG GCGTGGCGCCGGCCTTCACCGACCTGATGGGCGGCCAGACCCAGGCCATG TTCCCCGGCCTGGCGGCCGCCATGCCGCACATCCGCTCGGGCCGGGTGCG CCCGCTGGCAGTGACCGGGCTGGCCCGGCACGCGCAGGTGAAGGACGTCC CCACGCTCGACGAATCGGGCTTCAAGGGCTTCGACGCCATGCAGTGGTAT GGCGTGGTCGGCCCGGCGGGCATGCCGCCGGCCATCGTCAAGCAGCTCAA CGACACGCTGGCCAGCGTGCTGAAGGCGCCGGACCTGCGCGAGAAGCTGT CGGTGGAGGCCGTGGAGCCGCAGCCGATGACGGCCGAGGAGTTCGGCCGC TACATGCAGGCCGATCTGGCACGCTGGACCAAGGTCGCACGCGAGCGCAG GATCGAGCTCGACAGCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12916:375..1343-

>mRNA_P-wetherbeei_contig12916.1.1 ID=mRNA_P-wetherbeei_contig12916.1.1|Name=mRNA_P-wetherbeei_contig12916.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig12916:375..1343- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACCGCCGCTCCCTGCTGCGCGCCGCCCCCGCGCTGCTGGCCCTGCC
CGGCCTCGCCCGCGCGCAGGCCTACCCCGCCAAGTCCATCCGCTACATCG
TGCCGGTATCGGCCGGCGGCGGCAGCGACATGGTGGGCCGCACCGTGACC
GAGCGCTGGGGCCGGCTGCTGAACCAGACCTTCGTGGTGGACAACCAGGG
CGGCGGCGGCGGCGTGATCGCCAGCCAGGCCACGGCGCGCGCCGCGCCCG
ACGGCTACACGCTGATGCAGGGCTACGTGGCCACGCACGGCACCAGCCCG
GCCACGCGCAAGCTGCCCTACGACCCGATCAAGGACTTCACCCCCATCGG
CATGATCGGCGGCACCCCCAACGTGCTGGTGGTCAACGCCGCACTGCCGG
TGAACAACCTCAAGGAGTTCGTCGCCTACCTGCGGCAGAACCCGGGCAGG
GTCAGCTACGGCTCGGCCGGGCCGGGATCTCTGACGCACCTGACGATGGA
GCTGTTCAAGCAGCAGATCGATGCCTTCATGGTCCACATTCCCTACCGCG
GCGTGGCGCCGGCCTTCACCGACCTGATGGGCGGCCAGACCCAGGCCATG
TTCCCCGGCCTGGCGGCCGCCATGCCGCACATCCGCTCGGGCCGGGTGCG
CCCGCTGGCAGTGACCGGGCTGGCCCGGCACGCGCAGGTGAAGGACGTCC
CCACGCTCGACGAATCGGGCTTCAAGGGCTTCGACGCCATGCAGTGGTAT
GGCGTGGTCGGCCCGGCGGGCATGCCGCCGGCCATCGTCAAGCAGCTCAA
CGACACGCTGGCCAGCGTGCTGAAGGCGCCGGACCTGCGCGAGAAGCTGT
CGGTGGAGGCCGTGGAGCCGCAGCCGATGACGGCCGAGGAGTTCGGCCGC
TACATGCAGGCCGATCTGGCACGCTGGACCAAGGTCGCACGCGAGCGCAG
GATCGAGCTCGACAGCTGA
back to top