mRNA_P-wetherbeei_contig7878.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7878.1.2
Unique NamemRNA_P-wetherbeei_contig7878.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: D8LUA8_ECTSI (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA8_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 2.400e-116
Identity = 197/283 (69.61%), Postives = 228/283 (80.57%), Query Frame = 2
Query:  479 SDDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADM-AAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            +++ SER+NA RILRTLA HLWPSKE+Q DH +IKARV  SL LL+GAKL+TIQVPFIFK LVD L   S   A +  A   A  AG  + +  VAVPV++VLGYG+ARSTA+G QELRN VFA VAQ+AIRRV   VFEHLH L L YHL+KNTG +SRIIDRGGRSIQ+TLS+M+FNV PT++EISLVSGI+A+QASWKYS VC  TI  Y AYT  ITQWRT+FRK MI  ENEA AKV DSLVNYETVKYFNNEAHE+SRYDES+ G+Q A++KTQTSL
Sbjct:   62 AEEASERDNAKRILRTLATHLWPSKELQADHVSIKARVVGSLALLLGAKLVTIQVPFIFKGLVDTLGETSRVAAAAAAATGDAVVAGGVSPEAAVAVPVSMVLGYGIARSTASGAQELRNVVFAVVAQRAIRRVGRDVFEHLHDLGLKYHLEKNTGTVSRIIDRGGRSIQYTLSAMLFNVLPTIVEISLVSGILASQASWKYSAVCCSTIVTYSAYTFGITQWRTKFRKQMIAQENEASAKVTDSLVNYETVKYFNNEAHEASRYDESLKGFQEASVKTQTSL 344          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A836CGR1_9STRA (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGR1_9STRA)

HSP 1 Score: 368 bits (945), Expect = 5.770e-116
Identity = 191/281 (67.97%), Postives = 225/281 (80.07%), Query Frame = 2
Query:  482 DDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            D   ERE A RIL+TL+AH+WPSKE+  DH +IKARV +SL LLV +KL+TIQVPFIFK+LVD L +V P           AA  A   DP  AVP+ALVLGYG+ARSTA+GFQELR  +FATVAQ+AIRRV+  +F H+H LDL +HL KNTG L+R IDRGGRSIQ+TL+SMVFNV P +LEI LVSGI+ +QASW YS VCFGTIGAY AYT+A+TQWRT+FRK MI+LENEA AKV DSLVNYETVK+FNNE HE++RYD+S+ GYQ AALKT TSL
Sbjct:   84 DQKGEREVALRILKTLSAHIWPSKEVTKDHVSIKARVGISLTLLVASKLVTIQVPFIFKNLVDNLNSVDP-----------AATAAVAADPWTAVPIALVLGYGLARSTASGFQELRTTIFATVAQRAIRRVSRDIFMHIHALDLQFHLAKNTGVLTRTIDRGGRSIQYTLNSMVFNVVPMVLEIGLVSGILLSQASWHYSAVCFGTIGAYAAYTVAVTQWRTKFRKDMIRLENEASAKVTDSLVNYETVKFFNNEEHEANRYDKSLEGYQHAALKTGTSL 353          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A7S4DCW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCW5_HETAK)

HSP 1 Score: 333 bits (855), Expect = 6.740e-103
Identity = 170/271 (62.73%), Postives = 212/271 (78.23%), Query Frame = 2
Query:  512 RILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            RIL+TL  H+WP  ++  DH +IK+RVA SLGLL+GAKLITIQVPFIFK LVD L+A+ P        D+AA   A   DP+V  PVAL LGYGVAR++A+GFQELRNAVF++VAQQAIR+V+ +VFEHLH LDL +HL +NTGALSR+IDRGGRSI +TLS+ +FNV PTL EI LVS I+  +    Y+   FGTIGAY+ YT+ +T+WRT FRK+M++ EN+A +K  DSL+NYETVKYFNNE HE  RY++++  YQRAALKTQTSL
Sbjct:   91 RILKTLFTHIWPDSKLNSDHFSIKSRVAGSLGLLIGAKLITIQVPFIFKELVDQLSAIPP--------DVAAGLTAGAADPVVTFPVALALGYGVARASASGFQELRNAVFSSVAQQAIRKVSANVFEHLHNLDLQFHLDRNTGALSRVIDRGGRSINYTLSATIFNVAPTLFEIGLVSSILTAKFGPAYAATTFGTIGAYIYYTVKVTEWRTDFRKSMLRAENDASSKAIDSLINYETVKYFNNEGHERERYEKNLKEYQRAALKTQTSL 353          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A6H5J9G7_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9G7_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 7.980e-101
Identity = 179/283 (63.25%), Postives = 206/283 (72.79%), Query Frame = 2
Query:  479 SDDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADM-AAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            +++ SER+NA RIL TLA HLWPSKE+Q DH +IKARV  SL LL+GAKL+TIQVPFIFK LVD L   S   A +  A   A  AG  + +  VAVP+++VLGYG+ARSTA+G QELRN VFA VAQ+AIRRV   VFEHLH L L YHL+KNTG +SRIIDRGG                      LVSGI+A+QASWKYS VC  TI  Y AYT  ITQWRT+FRK MI  ENEA AKV DSLVNYETVKYFNNEAHE+SRYDES+ G+Q A++KTQTSL
Sbjct:  192 AEEASERDNAKRILMTLATHLWPSKELQADHVSIKARVVGSLALLLGAKLVTIQVPFIFKDLVDTLGETSRAAAATAAATGDAVVAGGVSPEAAVAVPMSMVLGYGIARSTASGAQELRNVVFAVVAQRAIRRVGRDVFEHLHDLGLQYHLEKNTGTVSRIIDRGG----------------------LVSGILASQASWKYSAVCCSTIVTYSAYTFGITQWRTKFRKQMIAQENEASAKVTDSLVNYETVKYFNNEAHEASRYDESLKGFQEASVKTQTSL 452          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: W7TLP4_9STRA (Abc transporter b family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLP4_9STRA)

HSP 1 Score: 306 bits (784), Expect = 7.890e-93
Identity = 159/278 (57.19%), Postives = 204/278 (73.38%), Query Frame = 2
Query:  491 SERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            +ER    RIL+TL  HLWPS  + PD A++KARV LS+GLLV +KLITIQVPF+FK +VD L  V P                A     VA+P++L++GYGVAR+TA  FQELRNAVFATVAQ+AIR+V+   F HLH L+L +HL ++TGA+SR+IDRGGRSI F LS+++FN+ PT LE+ LV+ I++ Q  WK++ V  GT+GAY  +T+ ITQWRTQFRK M+++ENEA  K  DSL+NYETVKYF NE HE+ RYD+S+  +Q A LKTQTSL
Sbjct:   16 NERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLN-VPPD---------------AFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSL 277          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A4D9D003_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D003_9STRA)

HSP 1 Score: 306 bits (784), Expect = 2.010e-91
Identity = 161/291 (55.33%), Postives = 208/291 (71.48%), Query Frame = 2
Query:  452 RKLKAAAGASDDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            R+ +   G     +ER    RIL+TL  HLWPS  + PD A++KARV LS+GLLV +KLITIQVPF+FK +VD L  V P                A     VA+P++L++GYGVAR+TA  FQELRNAVFATVAQ+AIR+V+   F HLH L+L +HL ++TGA+SR+IDRGGRSI F LS+++FN+ PT LE+ LV+ I++ Q  WK++ V  GT+GAY  +T+ ITQWRTQFRK M+++ENEA  K  DSL+NYETVKYF NE HE+ RYD+S+  +Q A LKTQTSL
Sbjct:   20 RRSQPLKGEKSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLN-VPPD---------------AFLTGAVALPLSLLIGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFIHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLREFQEAGLKTQTSL 294          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A7S1YV57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YV57_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.280e-89
Identity = 160/290 (55.17%), Postives = 205/290 (70.69%), Query Frame = 2
Query:  473 GASDDGSERENAGRILRTLAAHLWPS------KEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            G   D SE E   RI +TLA H+WP+      +E +     +K RV  SLGL+ G KL+TIQVPF+FK+LVD L     Q A   VA + AA+       +  VP++LV+GYGV+R+ A+G QELRNAVFA VAQ AIRRV   VF H+H LD+S+HL +NTG LSR++DRG RSI F L++MVFN+ PT LE+++V+G++A      ++ V   TIGAY AYT+ ITQWRTQFR+ M +LENEA +KV DSL+NYETVKYFNNE HE  RY++S+ GYQ+AALK QTSL
Sbjct:   85 GIKSDMSEAEQQKRIAKTLAKHVWPTITNDMDEESKAHAKRLKRRVIASLGLMAGGKLVTIQVPFLFKYLVDSLPL---QTATVDVATIDAAS-------LGFVPLSLVVGYGVSRAAASGMQELRNAVFAHVAQDAIRRVGRQVFNHVHSLDMSFHLNRNTGTLSRVLDRGNRSISFVLNAMVFNIVPTTLEVAVVTGLMAHHFGPTHAGVVLSTIGAYTAYTVGITQWRTQFRRDMNRLENEASSKVVDSLLNYETVKYFNNELHEVDRYEDSLGGYQKAALKAQTSL 364          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A1V9YW57_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YW57_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.490e-86
Identity = 155/270 (57.41%), Postives = 188/270 (69.63%), Query Frame = 2
Query:  515 ILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            I+ +LA +LWPS +  P+    K+RV LSLGLLV AKLI IQVPFIFK LVD +   +P++A                   VA+PV+LVLGYG+ R +A  FQELRNA+FA VA   IR+VA +VFEHLH LDL +HL + TGALSR IDRG RSI F L SM+FNV PT LEI LVS I+A Q  W+Y+ V   T+ AY  +T+ +TQWRT+ R+ M KLENEAG KV DSL+NYETVKYFNNE HE+ RYD  +  YQ A+L TQTSL
Sbjct:   56 IVSSLAGYLWPSGD-SPEARGTKSRVVLSLGLLVSAKLINIQVPFIFKDLVDVMGTATPEVA-------------------VALPVSLVLGYGLGRFSANAFQELRNAIFAKVAHGTIRQVARNVFEHLHGLDLKFHLDRQTGALSRTIDRGSRSIDFVLRSMLFNVAPTALEIGLVSSIMAHQFGWEYAAVALSTLTAYTGFTVGVTQWRTEIRRRMNKLENEAGGKVIDSLMNYETVKYFNNEKHEADRYDNVLRAYQDASLITQTSL 305          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A6V2Q6L2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q6L2_9STRA)

HSP 1 Score: 290 bits (741), Expect = 7.510e-86
Identity = 160/290 (55.17%), Postives = 205/290 (70.69%), Query Frame = 2
Query:  473 GASDDGSERENAGRILRTLAAHLWPS------KEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            G   D SE E   RI +TLA H+WP+      +E +     +K RV  SLGL+ G KL+TIQVPF+FK+LVD L     Q A   VA + AA+       +  VP++LV+GYGV+R+ A+G QELRNAVFA VAQ AIRRV   VF H+H LD+S+HL +NTG LSR++DRG RSI F L++MVFN+ PT LE+++V+G++A      ++ V   TIGAY AYT+ ITQWRTQFR+ M +LENEA +KV DSL+NYETVKYFNNE HE  RY++S+ GYQ+AALK QTSL
Sbjct:   85 GIKSDMSEAEQQKRIAKTLAKHVWPTITNDMDEESKAHAKRLKRRVIASLGLMAGGKLVTIQVPFLFKYLVDSLPL---QTATVDVATIDAAS-------LGFVPLSLVVGYGVSRAAASGMQELRNAVFAHVAQDAIRRVGRQVFNHVHSLDMSFHLNRNTGTLSRVLDRGNRSISFVLNAMVFNIVPTTLEVAVVTGLMAHHFGPTHAGVVLSTIGAYTAYTVGITQWRTQFRRDMNRLENEASSKVVDSLLNYETVKYFNNELHEVDRYEDSLGGYQKAALKAQTSL 364          
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A067CWK0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWK0_SAPPC)

HSP 1 Score: 286 bits (732), Expect = 1.130e-85
Identity = 161/292 (55.14%), Postives = 197/292 (67.47%), Query Frame = 2
Query:  467 AAGASDDGSEREN------AGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
            AAG + D   +E       +  I+ +LA +LWP      +  A+K RVALSLG+LV AKLI IQVPF+FK LVD +   SP++A                    A+PV+LVLGYG+ R +A  FQELRNA+FA VAQ  IR+VA +VFEHLH LDL +HL + TGALSR IDRG RSI F L SM+FNV PT LEI LVS I+A Q  W+Y+ V  GT+ AY  +T+ +TQWRT+ R+ M KLENEAG KV DSL+NYETVKYFNNE HE+ RYD  +  YQ A+LKTQTSL
Sbjct:   31 AAGLATDAKSKEQTPVPVTSKEIVTSLAGYLWPEGN-GAEARAVKGRVALSLGMLVSAKLINIQVPFLFKELVDVMGTTSPEVA-------------------AALPVSLVLGYGLGRFSANAFQELRNAIFAKVAQGTIRQVARNVFEHLHGLDLKFHLDRQTGALSRTIDRGSRSIDFVLRSMLFNVAPTALEIGLVSSIMAYQFGWEYAAVTLGTLTAYTGFTVGVTQWRTEIRRRMNKLENEAGGKVIDSLMNYETVKYFNNEKHEADRYDVVLRNYQDASLKTQTSL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUA8_ECTSI2.400e-11669.61Iron-sulfur clusters transporter atm1, mitochondri... [more]
A0A836CGR1_9STRA5.770e-11667.97Iron-sulfur clusters transporter atm1, mitochondri... [more]
A0A7S4DCW5_HETAK6.740e-10362.73Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5J9G7_9PHAE7.980e-10163.25ABC transmembrane type-1 domain-containing protein... [more]
W7TLP4_9STRA7.890e-9357.19Abc transporter b family protein n=1 Tax=Nannochlo... [more]
A0A4D9D003_9STRA2.010e-9155.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1YV57_9STRA1.280e-8955.17Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A1V9YW57_9STRA1.490e-8657.41ATP-binding Cassette (ABC) Superfamily n=1 Tax=Thr... [more]
A0A6V2Q6L2_9STRA7.510e-8655.17Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A067CWK0_SAPPC1.130e-8555.14Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7878contigP-wetherbeei_contig7878:2..2882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LUA8
PFAMsABC_membrane,ABC_tran
Model size1594
Max annot lvl2759|Eukaryota
KEGG koko:K05662
KEGG TC3.A.1.210
KEGG Pathwayko02010,map02010
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031154,GO:0031224,GO:0032502,GO:0032991,GO:0042623,GO:0042626,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071944,GO:0090702,GO:0098533,GO:0098796,GO:0098797,GO:0099120,GO:1902494,GO:1902495,GO:1904949,GO:1990351
Exons7
Evalue3.82e-119
EggNOG OGsCOG5265@1|root,KOG0057@2759|Eukaryota
DescriptionATP-binding cassette subfamily B
Cds size1242
COG categoryO
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7878.1.2prot_P-wetherbeei_contig7878.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7878 266..2794 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187006.1343703-UTR-P-wetherbeei_contig7878:1..2651683187006.1343703-UTR-P-wetherbeei_contig7878:1..265Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7878 2..265 -
1683187006.2255857-UTR-P-wetherbeei_contig7878:2794..28821683187006.2255857-UTR-P-wetherbeei_contig7878:2794..2882Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7878 2795..2882 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187006.146639-CDS-P-wetherbeei_contig7878:265..3971683187006.146639-CDS-P-wetherbeei_contig7878:265..397Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 266..397 -
1683187006.1567044-CDS-P-wetherbeei_contig7878:617..7491683187006.1567044-CDS-P-wetherbeei_contig7878:617..749Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 618..749 -
1683187006.1672206-CDS-P-wetherbeei_contig7878:984..10791683187006.1672206-CDS-P-wetherbeei_contig7878:984..1079Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 985..1079 -
1683187006.1775658-CDS-P-wetherbeei_contig7878:1269..14171683187006.1775658-CDS-P-wetherbeei_contig7878:1269..1417Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 1270..1417 -
1683187006.1933634-CDS-P-wetherbeei_contig7878:1663..18461683187006.1933634-CDS-P-wetherbeei_contig7878:1663..1846Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 1664..1846 -
1683187006.2049458-CDS-P-wetherbeei_contig7878:2107..26071683187006.2049458-CDS-P-wetherbeei_contig7878:2107..2607Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 2108..2607 -
1683187006.215277-CDS-P-wetherbeei_contig7878:2742..27941683187006.215277-CDS-P-wetherbeei_contig7878:2742..2794Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7878 2743..2794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7878.1.2

>prot_P-wetherbeei_contig7878.1.2 ID=prot_P-wetherbeei_contig7878.1.2|Name=mRNA_P-wetherbeei_contig7878.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=414bp
MRRLPFPHAVRFQYRVQARPSSPPNLRVPTTARRRPDDGEMSGGRAFVST
AVQLRLPSTIVSCLLPTCSCAGAKFPPQMRAPWASSRLRPLSTTIAPASA
ARASGDGGGGKPGSGKTPPAPRKLKAAAGASDDGSERENAGRILRTLAAH
LWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVS
PQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNA
VFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQF
TLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAIT
QWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAG
YQRAALKTQTSLR*
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mRNA from alignment at P-wetherbeei_contig7878:2..2882-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7878.1.2 ID=mRNA_P-wetherbeei_contig7878.1.2|Name=mRNA_P-wetherbeei_contig7878.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2881bp|location=Sequence derived from alignment at P-wetherbeei_contig7878:2..2882- (Phaeothamnion wetherbeei SAG_119_79)
CTTTTTAAGCGCTTTACCGATTCTTGTTGCCTGCTTCGCGGAATAGAAGC CCAAAGATACTTTTCCCCTCGAAACACACGCAAGCGTCATGCGCCGCCTT CCCTTCCCGCATGCCGTCAGATTTCAGTATCGGGTTCAAGGTGAGCTCTG CACTCTTTTTGGAGCCTCAAATCGCCAGCGTAAAGCTTTGCAAGGAACCC GAAGCAAGTCCTGCCCTTTATCTCACGAAGCGCTTTCCTTCGTGGTCCGT TTTACTCATTTGTTTCAAACCACAGCACGGCCTTCCTCACCTCCGAATCT GAGAGTTCCGACAACAGCAAGGAGACGGCCCGATGATGGAGAGATGAGCG GTGGTCGGGCTTTCGTGTCGACGGCTGTACAGCTGAGACTGCCATCGACA ATAGTCTCATGCTTGCTGCCAACGTGCAGTTGCGCCGGTGCAAAATTCCC GCCGCAGATGCGCGCACCCTGGGCCTCCTCACGCTTAAGGCCCCTCTCGA CGACCATCGCCCCTGCCAGCGCTGCTCGCGCCAGTGGCGACGGCGGTGGC GGCAAGCCCGGTTCCGGCAAAACGCCGCCGGCGCCTCGGAAACTGAAGGC GGCGGCCGGGGCGTCCGACGATGGCAGTGAGCGCGAGAACGCCGGCCGTA TCCTGCGGACGCTGGCTGCGCACCTCTGGCCGAGCAAGGAGATGCAGCCC GATCACGCGGCCATCAAGGCCCGCGTCGCGTTATCGCTGGGCCTGCTGGT CGGCGCCAAGCTCATCACCATTCAGGTATTGTGTGCGCCTTCGGCTGATT GTGTTTCTCCGACCTCGCCGATGCTGTCGAACGAGCCCCCTACAGCCATT GCCTCGGTCTGCTCATGTGAACGCACGCGGCAGGGGTGACATCTGTCTGT CTTCGGACTTGACGCGGTTAAAGCGAAAGCAATGAAAGAAGAAAGGGGCA AATTCCTTTTCTTTCCTCACGAGGCGTTACCTTCTCCCTCTCACGCCTCC TGCCTGAGAACTCCCGATATTTCCGGACTTTTCCAGGTGCCGTTCATTTT TAAGCACCTGGTGGATGGGCTCACAGCCGTCTCGCCGCAGATCGCCGAGT CGAGAGTGGCGGACATGGCGGCGGCAGCAGGGGCCGCGACGACGGATCCG ATGGTTGCCGTGCCTGTAGCACTGGTCCTGGGGTACGGCGTGGCGCGAAG CACTGCTGCGGGCTTTCAGGTGTGTGCCGGCATCGCATTTGGAGAATACT TTTGCGGACGCGAGCACTATCTTGATAAGGATGTTGCTGCTTGCTCCTCA ATGTTGGTGGCCTCCAATTTATCGCAATTCAGCTCGCCGTGCATCTCTCT AAATTGCCAAGTTGGTTCCCTCCTTTTGATGAGAACCACCAAGTTGGGTC CCATTTGAACCCACTTTTCTGACAAAATATTCGCCCGTGTCTCTTCCAAA ACCTTGTTCCTATAGGAACTGCGGAACGCCGTCTTTGCGACGGTTGCCCA GCAGGCGATCCGGCGGGTGGCGGTGAGCGTCTTCGAGCACCTCCACCAGC TCGACCTGAGCTATCACCTCCAGAAGAACACCGGTGCTCTCAGCCGTATC ATCGACCGCGGAGGTCAGCTAATGAGGCTCTGGCGGCGGCGGCGACGACT GTTACGGCGATGGCGGGGTAGTGCTCGATGCCTGCGAGGTTTACGATGCT CAGCTTCTTTTGTGGCACCATTCCTGCCTCTGACAGTGGTTCGCTGAACG GTTTCGGCGGTTTCGGAATATTTGGCTTTCTGCTTTCCTTCTCTGCCACG CAGGTCGGTCGATCCAGTTCACCCTGAGTTCGATGGTCTTCAACGTCTTC CCGACGCTGCTGGAGATTAGCCTAGTCAGCGGCATCGTCGCCACGCAGGT GCAAATGGACCTGGGGTTAGAGATCTGTAACCGTCGGTTTTTTGGTGCGT GTTAAGATTTGAAGCCGCTATCAGTAACGTCTTCCCGCGTGGTAGTCCCC GTATCTTTTCGGTTCCCTTTTGAATTATTCCTTTTCCGACTGGCCTTTCA CTTCCTTCCCTTTCGTCTGTTTTCTCTGCTGATTGTTTACATGGCAATGG CGGGGCGAATGATGGCGGGGCGAACGGCGTCAGGCGTCGTGGAAGTACTC GATGGTGTGCTTCGGGACAATCGGGGCCTACGTGGCCTACACGCTCGCCA TCACGCAGTGGCGCACGCAGTTCCGAAAAGCCATGATCAAGCTCGAGAAC GAGGCCGGTGCCAAGGTCAGAGTCAGACAGAAGGCTGTTGCGAAGCTGTT TTGCTCCGGCGGGAATTTGGATACCAAATATGACAAAAAAGTAACTTCGC TTTCGCAGCTCTTGTCAAGGAACTGACATGCACCGTTTGCCGCCGCCGCC GCCGCCATGCCGGTTCTCCTGCTGCCGCCGCGCTGTCTGCCGTCCCGCCA CGCCTGCATTTGCTGCATCTGCTGCATCTGTGCAGGTGAACGACTCGCTG GTCAACTACGAGACAGTTAAGTACTTCAACAACGAGGCGCATGAGAGCAG CCGCTACGACGAGTCAATGGCGGGTTACCAGCGCGCCGCCCTCAAGACCC AGACCTCTCTCAGGTAACAAGAAGGACAGTCACGGGTGCAGGCTGCGGGC AGCCAGCAGCAGAGTGAGGCATCGGTTGTTGGGGCTCTCTTGCGAGTGAG GTTGAAAAGAGCCGGCGGTTGGCGCAGCCTCGGCGCAGCCTCGGCGCAGG AATTTTGCGTTGCAGTTCATTCCGATTATCGCCGCCGCTGCTGCTGCTGC TGCTGCGACCACCGCCCCTGCTCCAGTGCCTCGCACTGCCGCCCATTTCT GCCGCTGCCTCCCCATTGCGGCCGCTGCCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7878:2..2882-

>mRNA_P-wetherbeei_contig7878.1.2 ID=mRNA_P-wetherbeei_contig7878.1.2|Name=mRNA_P-wetherbeei_contig7878.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1242bp|location=Sequence derived from alignment at P-wetherbeei_contig7878:2..2882- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCGCCTTCCCTTCCCGCATGCCGTCAGATTTCAGTATCGGGTTCA
AGCACGGCCTTCCTCACCTCCGAATCTGAGAGTTCCGACAACAGCAAGGA
GACGGCCCGATGATGGAGAGATGAGCGGTGGTCGGGCTTTCGTGTCGACG
GCTGTACAGCTGAGACTGCCATCGACAATAGTCTCATGCTTGCTGCCAAC
GTGCAGTTGCGCCGGTGCAAAATTCCCGCCGCAGATGCGCGCACCCTGGG
CCTCCTCACGCTTAAGGCCCCTCTCGACGACCATCGCCCCTGCCAGCGCT
GCTCGCGCCAGTGGCGACGGCGGTGGCGGCAAGCCCGGTTCCGGCAAAAC
GCCGCCGGCGCCTCGGAAACTGAAGGCGGCGGCCGGGGCGTCCGACGATG
GCAGTGAGCGCGAGAACGCCGGCCGTATCCTGCGGACGCTGGCTGCGCAC
CTCTGGCCGAGCAAGGAGATGCAGCCCGATCACGCGGCCATCAAGGCCCG
CGTCGCGTTATCGCTGGGCCTGCTGGTCGGCGCCAAGCTCATCACCATTC
AGGTGCCGTTCATTTTTAAGCACCTGGTGGATGGGCTCACAGCCGTCTCG
CCGCAGATCGCCGAGTCGAGAGTGGCGGACATGGCGGCGGCAGCAGGGGC
CGCGACGACGGATCCGATGGTTGCCGTGCCTGTAGCACTGGTCCTGGGGT
ACGGCGTGGCGCGAAGCACTGCTGCGGGCTTTCAGGAACTGCGGAACGCC
GTCTTTGCGACGGTTGCCCAGCAGGCGATCCGGCGGGTGGCGGTGAGCGT
CTTCGAGCACCTCCACCAGCTCGACCTGAGCTATCACCTCCAGAAGAACA
CCGGTGCTCTCAGCCGTATCATCGACCGCGGAGGTCGGTCGATCCAGTTC
ACCCTGAGTTCGATGGTCTTCAACGTCTTCCCGACGCTGCTGGAGATTAG
CCTAGTCAGCGGCATCGTCGCCACGCAGGCGTCGTGGAAGTACTCGATGG
TGTGCTTCGGGACAATCGGGGCCTACGTGGCCTACACGCTCGCCATCACG
CAGTGGCGCACGCAGTTCCGAAAAGCCATGATCAAGCTCGAGAACGAGGC
CGGTGCCAAGGTGAACGACTCGCTGGTCAACTACGAGACAGTTAAGTACT
TCAACAACGAGGCGCATGAGAGCAGCCGCTACGACGAGTCAATGGCGGGT
TACCAGCGCGCCGCCCTCAAGACCCAGACCTCTCTCAGGTAA
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