mRNA_P-wetherbeei_contig7877.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A7S0H280_9EUKA (Uroporphyrinogen decarboxylase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H280_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 7.500e-22 Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 40 QGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEAL 231
QGNFDP L +GTEESV AAVGEML+ELGPQRLIANLGEGL GKE P+LV FVDA+H SE +
Sbjct: 409 QGNFDPKLLQEGTEESVKAAVGEMLQELGPQRLIANLGEGLSGKEDPKLVKAFVDAIHATSEEM 472
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A1L3A3Z5_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Trachelomonas ellipsoidalis TaxID=253960 RepID=A0A1L3A3Z5_9EUGL) HSP 1 Score: 88.2 bits (217), Expect = 6.220e-20 Identity = 51/78 (65.38%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 1 AATGSAAVAPAACQGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
A GS A A QGN D A L GTE V A +MLRELGPQ LIANLGEGL GKE PRLV FVDAVHELSE +I
Sbjct: 128 AVNGSPAGHVAGVQGNLDVALLQSGTELQVREATAQMLRELGPQGLIANLGEGLMGKEDPRLVTAFVDAVHELSEEMI 205
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A7S1VAW3_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VAW3_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.610e-19 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 40 QGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
QGN+DP HLV+GT ESV EML+ELG QRLIANLGEGLGGKE+ LV FVDAVH SE++I
Sbjct: 365 QGNYDPKHLVEGTPESVTETAREMLQELGCQRLIANLGEGLGGKEKTELVKAFVDAVHSESESII 429
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A1L3A408_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Trachelomonas volvocina TaxID=103340 RepID=A0A1L3A408_9EUGL) HSP 1 Score: 89.4 bits (220), Expect = 2.680e-19 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 40 QGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
QGNFD L DGTEE V AV +ML++LGPQ LIANLGEGL GKE PRLV FVDAVHE+SE +I
Sbjct: 317 QGNFDVKLLQDGTEEQVREAVAKMLQDLGPQGLIANLGEGLMGKEDPRLVTTFVDAVHEISEQMI 381
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A1L3A3Y2_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena clara TaxID=215708 RepID=A0A1L3A3Y2_9EUGL) HSP 1 Score: 87.8 bits (216), Expect = 1.000e-18 Identity = 48/77 (62.34%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 4 ATGSAAVAPAACQGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
A GS + A QGN D A L GTE+ + A ++L ELGPQ LIANLGEGL GKE P LVACFVDAVHELSE +I
Sbjct: 305 ANGSPSGHVAGVQGNLDVALLQTGTEQEIQEATAQLLGELGPQGLIANLGEGLMGKEDPALVACFVDAVHELSEEMI 381
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A1L3A3Z9_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Monomorphina parapyrum TaxID=1664066 RepID=A0A1L3A3Z9_9EUGL) HSP 1 Score: 87.4 bits (215), Expect = 1.350e-18 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 40 QGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
QGN D A L GTEE V AAV ++L ELGPQ LIANLGEGL G+E PRLVA FVD VHELS+A+I
Sbjct: 317 QGNLDVALLQTGTEEQVRAAVQQLLEELGPQGLIANLGEGLMGQEDPRLVAIFVDTVHELSDAMI 381
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A7S0BVX0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVX0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.470e-18 Identity = 46/69 (66.67%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 40 QGNFDPAHLV----DGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
QGN+DP L+ D T E+V A+ EML LGPQRLIANLGEGLGGKE P LVA FVDA+HE SE LI
Sbjct: 367 QGNYDPRFLIADGTDNTPETVRASAKEMLESLGPQRLIANLGEGLGGKESPDLVASFVDAIHEESEKLI 435
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A7S3AQJ1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AQJ1_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 4.520e-18 Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 40 QGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVH 213
QG+FDPA L+DGTEESV AV ML +LGPQ LIANL EGL GKE P+LV FVDAVH
Sbjct: 191 QGDFDPALLIDGTEESVRDAVNSMLTDLGPQNLIANLCEGLSGKEDPKLVTAFVDAVH 248
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A7S2TH76_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TH76_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 4.810e-18 Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 40 QGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEAL 231
QGNFDP L +GT E+V + V +ML++LG Q LIANLGEGL GKE P LV FVDAVHE SE +
Sbjct: 108 QGNFDPKFLQEGTPETVRSEVQQMLQDLGQQNLIANLGEGLSGKEDPALVKAFVDAVHEFSEQM 171
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Match: A0A1L3A3Z7_EUGST (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena stellata TaxID=38278 RepID=A0A1L3A3Z7_EUGST) HSP 1 Score: 85.5 bits (210), Expect = 5.670e-18 Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 4 ATGSAAVAPAACQGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLGEGLGGKEQPRLVACFVDAVHELSEALI 234
A GS + A QGN D L DGTE+ V A ++L ELGPQ LIANLGEGL GKE P+LVA FVDAVHE+SE +I
Sbjct: 278 ANGSPSGHMAGVQGNLDVVLLQDGTEQQVKDATAKLLEELGPQGLIANLGEGLMGKEDPKLVATFVDAVHEISEKMI 354 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7877.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7877.2.1 >prot_P-wetherbeei_contig7877.2.1 ID=prot_P-wetherbeei_contig7877.2.1|Name=mRNA_P-wetherbeei_contig7877.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp AATGSAAVAPAACQGNFDPAHLVDGTEESVWAAVGEMLRELGPQRLIANLback to top mRNA from alignment at P-wetherbeei_contig7877:2713..2946- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7877.2.1 ID=mRNA_P-wetherbeei_contig7877.2.1|Name=mRNA_P-wetherbeei_contig7877.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig7877:2713..2946- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7877:2713..2946- >mRNA_P-wetherbeei_contig7877.2.1 ID=mRNA_P-wetherbeei_contig7877.2.1|Name=mRNA_P-wetherbeei_contig7877.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig7877:2713..2946- (Phaeothamnion wetherbeei SAG_119_79)back to top |