mRNA_P-wetherbeei_contig7866.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7866.1.2
Unique NamemRNA_P-wetherbeei_contig7866.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A6H5KTE9_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE9_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 9.610e-30
Identity = 110/377 (29.18%), Postives = 152/377 (40.32%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPA---PPGFVESAARAEASFFFHHVFDPRERRCVHFCEPGGNSGGXXXXXXXXXXXXXXXXTVIYQEDDDFAEAPDFAALGDPSLFLGDSIGAEDALRVASGVLDPVTLEPV 1127
            + VTR+M     SAL+ EG E +V+PYEADAQVA+L K  LASA+ITEDSDILVY+  A + +   VLYK+D +G  + L  D  K   ++L   I                                                                                           GK GR  +I        F G GGGR FVQ+  L+GCDY+ N++ +G + A   V ++    A+ R+  I+    + G+ A   P G  E    AE SFF+H V+DPR ++CVHFCE      G                          A+ P   +    + FLG+ I  E  + ++ G +DPVT E V
Sbjct:  134 IHVTRQMVTNAMSALKREGVECMVSPYEADAQVAFLVKSDLASAVITEDSDILVYM--AAVKSTAPVLYKMDEFGTCKELGFDPEK--LSSLPGVI-------------------------------------------------------------------------------------------GKFGRGLSI--------FSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTALPIVTKFRRTLADKRVSHILMHVQKMGKTATSIPTGHRERMHLAEMSFFWHRVYDPRTKKCVHFCEAAPELMGT-------------------------ADVPALPSTAGGTAFLGEPIEDEMMVNISRGNVDPVTGEAV 382          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: D8LF34_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF34_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.930e-26
Identity = 96/329 (29.18%), Postives = 130/329 (39.51%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPY-----------------------------EADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCE 905
            + VTR+M     SAL+ EG E +V+PY                             EADAQVAYL K GLASA+ITEDSDILVY+  A + +   VLYK+D +G  + L  D  K   ++L   I                                                                                           GK GR  +I        F G GGGR FVQ+  L+GCDY+ N++ +G + A   V ++   PA+ R+  I+    + G+  P G  +    AE SFF+H V+DPR ++CVHFCE
Sbjct:  134 IHVTRQMVTNAMSALKREGVECMVSPYANGPSTKQAHPCVANDPHYGNQVGFFFFTEADAQVAYLVKSGLASAVITEDSDILVYM--AAVKSTAPVLYKMDEFGTCKELGFDPEK--LSSLPGVI-------------------------------------------------------------------------------------------GKFGRGLSI--------FSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTALPIVTKFRRTPADKRVSHILMHVQKMGKTIPTGHRDRMHLAEMSFFWHRVYDPRTKKCVHFCE 359          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A6G0XUA1_9STRA (XPGI domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUA1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.190e-19
Identity = 97/367 (26.43%), Postives = 135/367 (36.78%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEAC-PRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCEPGGNSGGXXXXXXXXXXXXXXXXTVIYQEDDDFAEAPDFAALG---DPSLFLGDSIGAEDALRV 1088
            V +T  + A +Q+ LR EG E + AP+EADAQ+ YLCKI  ASAIITEDSDILVY M A I++ +  L ++D  G  + +  +            + AC P SK A                                                                                             L KL HF        R FVQMCVLSGCD+L ++ ++GPV A   +  +   P   R++ I+     +    P  + +   RAEA F+ H+VF+P+ +R                             T     D DFA   D  AL    D + FLG  +  ++ L V
Sbjct:   30 VNITSDIIAALQATLRTEGVEFVTAPFEADAQMVYLCKINAASAIITEDSDILVYSMTANISSPI--LLRMDTTGACKMVSREI-----------LRACGPTSKSA--------------------------------------------------------------------------------------------FLKKLPHFLDSTVDSIRMFVQMCVLSGCDFLDSLPNIGPVTAQKHIFAFRGAPGHLRVKRILAKLRLDKVSVPADYFDQFCRAEALFYHHYVFNPQTQR-----------------------------TEFLVNDSDFAMISDIHALACSSDATAFLGQVLPPDEMLAV 262          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A485LP15_9STRA (Aste57867_23972 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP15_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.120e-17
Identity = 82/293 (27.99%), Postives = 116/293 (39.59%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDC-SKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDP 875
            V++T  +   VQ ALRA   + + AP+EADAQ+ YLCK+  ASAIITEDSDILVY + A I+  V +L +LD  G  +    D  SK    T A++ ++                                                                                                    L KL HF  G     R FVQMCVLSGCD+L ++ +VGPV A   +  +   P   RI+ ++   T +    P  +++   RAEA F+ H++F+P
Sbjct:  133 VKITSAIIEAVQLALRAGSIDFVTAPFEADAQMVYLCKVQKASAIITEDSDILVYSITANIS--VPILLRLDTTGTCKVDASDMVSKDILKTHASSSKST--------------------------------------------------------------------------------------------------FLKKLPHFLDGTVDSIRMFVQMCVLSGCDFLESLPNVGPVTAQKHIFAFRGAPGGLRIKRLLAKLTLDRVAVPADYLDRFCRAEALFYHHYIFNP 325          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A024TQP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQP6_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.430e-16
Identity = 80/301 (26.58%), Postives = 116/301 (38.54%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPA--PPGFVESAARAEASFFFHHVFDPRERRCVH 896
            V+VT  +   V +ALRA   + ++AP+EADAQ+ YLCK+  ASAIITEDSDILVY + A +A  +              L+LD   G    ++ AI                                                                                          +G + + +A   L KL HF        R FVQMCVLSGCD+L ++ ++GPV A   V  +   P   R++ I+     +      P  +++    AEA F+ H+V++P  R C H
Sbjct:  133 VKVTSDVVCAVHAALRAASVDFVIAPFEADAQMVYLCKVQKASAIITEDSDILVYSITANVAVPIL-------------LKLDYPSGACKIVSKAI---------------------------------------------------------------------------------------LKAHGATAKSSAF--LKKLVHFLDDSIDSIRMFVQMCVLSGCDFLESLPNIGPVTAQKHVFAFRGAPGHLRMQRILSKLKMDNSTLAIPSDYLDRCRAAEALFYHHYVYNPDSRACEH 331          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A2D4CBL0_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBL0_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 5.510e-15
Identity = 78/305 (25.57%), Postives = 112/305 (36.72%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARAL-RLDCS---KGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCEP 908
            V +T  + + V   LR      +VAP+EADAQ+ ++C+ GLASAI+TEDSD+LVY +AA +  D  VL+KLD  G   AL RL      KG   T    +E    S                                                                                         ++AA                R FVQ+C LSGCD+L ++ ++G V A   V  +   P+  R++ +V      G   P  FV    + E  FF H +F+ + ++C    EP
Sbjct:  135 VSITPEIVSNVMQGLRNANVRFVVAPFEADAQMVWMCREGLASAIVTEDSDVLVYCVAASV--DCPVLFKLDDGGMVHALSRLSLHRKCKGSANTFLKRLEHLTTSD----------------------------------------------------------------------------------------KQAA----------------RMFVQVCALSGCDFLDSLPNMGVVTALKHVFSFRGAPSHVRVQRLVSKLAASGTKIPSDFVSRFQQTECIFFHHIIFNEKTQQCEFLVEP 333          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A418B9E5_9STRA (XPGI domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B9E5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 5.580e-12
Identity = 71/276 (25.72%), Postives = 101/276 (36.59%), Query Frame = 3
Query:   81 PYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPA--PPGFVESAARAEASFFFHHVFDPRERRCVH 896
            P+EADAQ+ YLCK+  ASAIITEDSDILVY + A +A  +              L+LD   G    ++ AI                                                                                          +G + + +A   L KL HF        R FVQMCVLSGCD+L ++ ++GPV A   V  +   P   R++ I+     +      P  +++    AEA F+ H+V++P  R C H
Sbjct:   13 PFEADAQMVYLCKVQKASAIITEDSDILVYSITANVAVPIL-------------LKLDYPSGACKIVSKAI---------------------------------------------------------------------------------------LKAHGATAKSSAF--LKKLVHFLDDSIDSIRMFVQMCVLSGCDFLESLPNIGPVTAQKHVFAFRGAPGHLRMQRILSKLKMDNSTLAIPSDYLDRCRAAEALFYHHYVYNPDSRACEH 186          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A1Y1ZEP0_9FUNG (Exonuclease 1 (Fragment) n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZEP0_9FUNG)

HSP 1 Score: 73.9 bits (180), Expect = 4.950e-11
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 3
Query:    3 CVRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLD 254
            CV +T +MA Q+  ALR E  E IVAPYEADAQ+AYL KIG  SAIITEDSD+LVY           V++KLD  GN   ++++
Sbjct:  122 CVDITPQMAFQLIKALREENVEFIVAPYEADAQLAYLDKIGRVSAIITEDSDLLVYGCKC-------VIFKLDHQGNGIEVKIE 198          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A5A8DN36_CAFRO (Exonuclease 1 n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DN36_CAFRO)

HSP 1 Score: 75.1 bits (183), Expect = 5.450e-11
Identity = 100/308 (32.47%), Postives = 132/308 (42.86%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPR---ERRCVHFCEPGGNS 920
            + VT      V  ALRA     IVAP+EADAQ+A L   G  S+I+TEDSD+ V+L A G   DV  LY++D  G  + LR+    GP +   + ++     + A  G             XXXXXXXXXXXXXX     S  R  +   R                                     K    +    L KL         R+FVQ+CVL+GCDYL++   +G       + R A+   + R   IV    ++G P P G+      AEA F  H VFDP     RR V  C  GG++
Sbjct:  135 ISVTFEHTLPVLRALRAMRVPYIVAPFEADAQLAALAAGGHCSSIVTEDSDVAVFLSACGAGCDV--LYRMDDRGVGQLLRV--RPGPLSEWVS-LDGIEVMRAASAGRAAARSASAGPQPXXXXXXXXXXXXXXMGYAPSPGRAPAPSSRAP-----------------------------------KVVTPSTYAFLRKLSALSA----RQFVQLCVLAGCDYLTSPPGLGLRTGVKYLQRTAAADDDARPARIVREMAKDGVPVPDGYRRLFCMAEAGFRRHVVFDPALRAARRLVPVC--GGDA 396          
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A2V0P4S0_9CHLO (Exonuclease 1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P4S0_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 5.940e-11
Identity = 103/409 (25.18%), Postives = 137/409 (33.50%), Query Frame = 3
Query:    6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCE-PGGNSGGXXXXXXXXXXXXXXXXTVIYQEDDDFAEAPDFAALGD----PSLFLGDSIGAEDALRVASGVLDPVTLEPVEVAVIGRAAAAAPGRRQRAQATIGAVATAG 1217
            V VT  MA QV  AL+A G E +VAPYEADAQ+AYL + G   A++TEDSD+L Y       A   V +KLDR G        C +     LA    A P                                                                                               + L    H          F+QMC+LSGCD+L+ ++ +G  +A   V +Y           +V+     G P PPG+  +  RA  +F    VF P  R  VH    P G  G                            + P     GD    P  FLG ++  E A  +A+G LDP+T +P ++  I    A  P   Q   A +G    AG
Sbjct:  123 VDVTPAMARQVIDALKAAGVEFLVAPYEADAQMAYLARRGSVHAVVTEDSDLLAY-------ACPRVAFKLDRSGA-------CEE----VLAEEFTAVP----------------------------------------------------------------------------------------------GLPLASFTHEM--------FLQMCILSGCDFLAGLQGIGVRKAHGYVRKYKG------FVKLVKVLRFSGVPIPPGYEVAFQRALWAFRHCRVFCPAARTMVHLTPLPAGGIGAAD------------------------VDVPAAVPAGDQERAPLEFLGPALPDEVARGIAAGELDPITHQPFDLQAIY---AGCPNPPQHVAALLGLQEAAG 378          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTE9_9PHAE9.610e-3029.18Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LF34_ECTSI1.930e-2629.18Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6G0XUA1_9STRA2.190e-1926.43XPGI domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A485LP15_9STRA5.120e-1727.99Aste57867_23972 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TQP6_9STRA2.430e-1626.58Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A2D4CBL0_PYTIN5.510e-1525.57Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A418B9E5_9STRA5.580e-1225.72XPGI domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A1Y1ZEP0_9FUNG4.950e-1153.57Exonuclease 1 (Fragment) n=1 Tax=Basidiobolus meri... [more]
A0A5A8DN36_CAFRO5.450e-1132.47Exonuclease 1 n=4 Tax=Cafeteria roenbergensis TaxI... [more]
A0A2V0P4S0_9CHLO5.940e-1125.18Exonuclease 1 n=1 Tax=Raphidocelis subcapitata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7866contigP-wetherbeei_contig7866:538..2852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LF34
PFAMsXPG_I,XPG_N
Model size1280
Max annot lvl2759|Eukaryota
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.2e-25
EggNOG OGsCOG0258@1|root,KOG2518@2759|Eukaryota
Ec32 ortholog descriptionXPG-I domain
Ec32 orthologEc-06_001490.1
Description5'-3' exodeoxyribonuclease activity
Cds size1257
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.5100179-CDS-P-wetherbeei_contig7866:537..7631683187005.5100179-CDS-P-wetherbeei_contig7866:537..763Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7866 538..763 -
1683187005.5270483-CDS-P-wetherbeei_contig7866:1055..18871683187005.5270483-CDS-P-wetherbeei_contig7866:1055..1887Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7866 1056..1887 -
1683187005.5372298-CDS-P-wetherbeei_contig7866:2228..23311683187005.5372298-CDS-P-wetherbeei_contig7866:2228..2331Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7866 2229..2331 -
1683187005.549376-CDS-P-wetherbeei_contig7866:2733..28291683187005.549376-CDS-P-wetherbeei_contig7866:2733..2829Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7866 2734..2829 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.5739048-UTR-P-wetherbeei_contig7866:2829..28521683187005.5739048-UTR-P-wetherbeei_contig7866:2829..2852Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7866 2830..2852 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7866.1.2prot_P-wetherbeei_contig7866.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7866 538..2829 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7866.1.2

>prot_P-wetherbeei_contig7866.1.2 ID=prot_P-wetherbeei_contig7866.1.2|Name=mRNA_P-wetherbeei_contig7866.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=419bp
MAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYL
MAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAG
GGSDDDGRGSDSSKSGSGSGSEDNVRLRGGGGGSSRSRGNSGVRRDGGDG
GSRNSGTRGKSRLSGSSGRGRGRGGGGRDGNGKSGRKAAIGLLDKLHHFG
GPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESI
VETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCEPGGNSG
GGGGDGDGRGDDSDGDGTVIYQEDDDFAEAPDFAALGDPSLFLGDSIGAE
DALRVASGVLDPVTLEPVEVAVIGRAAAAAPGRRQRAQATIGAVATAGGA
GRWGVTRHNSGNGGGGNSG
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mRNA from alignment at P-wetherbeei_contig7866:538..2852-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7866.1.2 ID=mRNA_P-wetherbeei_contig7866.1.2|Name=mRNA_P-wetherbeei_contig7866.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2315bp|location=Sequence derived from alignment at P-wetherbeei_contig7866:538..2852- (Phaeothamnion wetherbeei SAG_119_79)
AGTGCGTGCGCGTGACGCGGAGGATGGCGGCGCAGGTGCAGTCGGCGCTT CGGGCGGAGGGCTTCGAGACGATCGTCGCACCGTACGAGGCGGACGCCCA GGTCGCCTATCTCTGCAAGGTTAGCGCGGACAACCGCCGGGCGTTGCCAC CGTTACCGCCGCTGCCAGCCGTTGCCGCCACCACCGCTGCCAGCCGTTGC AGTTGCCCGCCACCGCCAGTCGTTGCCGCCATAACAGTTACCGGCCATTG CAGCCGCCGCTGCTAGCTACTGCCGGCCACCACAGTGTGCGTCCTGCAAC ATGGCCGAGCTCCCAGCCACCGCCGCTTCCGCCACTGTTTTCACGGCTGC GACCATCGGTTTTGGCGGCAGGGACTGCTTCGTTTGCGCGCTACGGTCTG GCAATCGCCGGTGCACAGCGCGGCTTCCCGACTACTTGCCGTTGCATTTC TCCTCTCTTCTTCAAAGTCTTTCTGTTGCGTTCCGCGACAATATCTCTCC TTTTGCGCTATTTTTACCCAGATCGGCCTCGCTTCAGCCATCATCACTGA GGACAGCGACATACTCGTCTACCTGATGGCCGCGGGCATCGCCGCCGACG TTACCGTGCTCTACAAGCTCGACCGTGCGTTTTTTGACGCGGCCGCCGGC TTGTGGCCGCCGCCGCTGTCGCCGCCGCTGCCGCCACCGCCGCCGCCGCC GCTGCTGCTGCCGCTGTTGCCGCCGCCGTCGCCGCCGCCGCCGCTGTCAT CGCTGCCGCTGTTGCCATTGCTTTGCTGCCGCCCCACTTGCCCTGCCTTT TACTGCCGCCATGCGCGGCTCCATCCCGCTCCGTTGCGCCTCTCTGCTGC GGGGCGGTCTTTGTTTGGCATAGTCAGCACCTGCATAACTTGATGCGGCC AATTGTGCGGATTTTTCGCTCATCATTGCCATCGTCCCTCTTTGTTGCTG CTTTGGTTTGCGCAGGGTACGGCAATGCCAGGGCGCTGCGGTTGGACTGT AGCAAGGGACCAACTACAACGCTGGCCGCGGCGATTGAGGCGTGCCCCCG CAGCAAACCCGCCGGTGGCGGCAGCGATGACGATGGACGCGGCAGCGACA GCAGCAAGAGTGGTAGCGGCAGCGGCAGTGAGGACAATGTCCGTCTTCGT GGCGGTGGCGGCGGCAGCAGTAGAAGTCGTGGCAACAGCGGCGTCCGCCG CGACGGCGGTGATGGTGGCAGCCGTAACAGCGGCACCCGCGGCAAGAGTC GACTCAGCGGCAGCAGCGGGAGGGGGCGTGGCCGTGGCGGCGGCGGTCGG GATGGTAACGGCAAGAGCGGCCGGAAAGCCGCCATCGGGCTATTGGACAA GCTGCATCACTTTGGTGGGCCCGGCGGCGGCCGCCGCTTCGTGCAGATGT GCGTCCTGTCCGGCTGCGACTACCTAAGCAACGTGAAGAGTGTCGGGCCG GTCCGCGCGGCGGACTCCGTTATCCGCTACGCGTCCGATCCTGCCGAAAC CCGGATCGAGTCCATCGTAGAGACGTGGACGAGGGAGGGACGCCCGGCGC CGCCGGGTTTCGTCGAGAGCGCCGCGCGCGCGGAGGCGTCCTTCTTCTTC CACCACGTCTTCGATCCCCGGGAGCGCCGCTGCGTCCACTTTTGCGAGCC TGGTGGCAACAGCGGCGGCGGCGGCGGCGACGGCGACGGGCGCGGTGACG ACAGCGACGGCGACGGCACTGTTATATATCAGGAGGACGACGACTTCGCC GAGGCCCCGGACTTTGCGGCGCTGGGCGACCCGAGCCTCTTTCTAGGGTG CGTCAATCGGCGACGAGAGCCGAATTCCTGCCCCAACAGGGTGCTCCCCA TTTGTTCATGGCGAGGGGTTATCATGTCTTGCATCTTTTGCGGCAGGTTC AGTTCTGTTCTATTTCTGTCACTGATTTTGCTGTCGATTTCGGAAACGGC GCCAGTTGCTGTTGTTAGCGAAGCACGGCGCCAGTTAATCTGTTTTAAAA CTGCTCTTCTTTTTCTCGTCGCCATTCTCTGCCTTCTCTTCCCTCTTGAT GCCACGCCCTCTGACTGCTCGTGGCTCTCGCGGGGGCAGCGACTCGATCG GGGCCGAGGACGCATTGCGGGTCGCTTCGGGGGTGCTAGATCCCGTCACG CTGGAACCAGTGGAAGTTGCAGTCATAGGAAGGGCGGCGGCGGCGGCGCC GGGGCGCCGGCAACGCGCACAAGCAACGATAGGAGCGGTGGCGACGGCGG GGGGCGCAGGCCGGTGGGGGGTAACCCGACACAACAGCGGCAATGGCGGC GGCGGCAACAGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7866:538..2852-

>mRNA_P-wetherbeei_contig7866.1.2 ID=mRNA_P-wetherbeei_contig7866.1.2|Name=mRNA_P-wetherbeei_contig7866.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig7866:538..2852- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCGCAGGTGCAGTCGGCGCTTCGGGCGGAGGGCTTCGAGACGAT
CGTCGCACCGTACGAGGCGGACGCCCAGGTCGCCTATCTCTGCAAGATCG
GCCTCGCTTCAGCCATCATCACTGAGGACAGCGACATACTCGTCTACCTG
ATGGCCGCGGGCATCGCCGCCGACGTTACCGTGCTCTACAAGCTCGACCG
GTACGGCAATGCCAGGGCGCTGCGGTTGGACTGTAGCAAGGGACCAACTA
CAACGCTGGCCGCGGCGATTGAGGCGTGCCCCCGCAGCAAACCCGCCGGT
GGCGGCAGCGATGACGATGGACGCGGCAGCGACAGCAGCAAGAGTGGTAG
CGGCAGCGGCAGTGAGGACAATGTCCGTCTTCGTGGCGGTGGCGGCGGCA
GCAGTAGAAGTCGTGGCAACAGCGGCGTCCGCCGCGACGGCGGTGATGGT
GGCAGCCGTAACAGCGGCACCCGCGGCAAGAGTCGACTCAGCGGCAGCAG
CGGGAGGGGGCGTGGCCGTGGCGGCGGCGGTCGGGATGGTAACGGCAAGA
GCGGCCGGAAAGCCGCCATCGGGCTATTGGACAAGCTGCATCACTTTGGT
GGGCCCGGCGGCGGCCGCCGCTTCGTGCAGATGTGCGTCCTGTCCGGCTG
CGACTACCTAAGCAACGTGAAGAGTGTCGGGCCGGTCCGCGCGGCGGACT
CCGTTATCCGCTACGCGTCCGATCCTGCCGAAACCCGGATCGAGTCCATC
GTAGAGACGTGGACGAGGGAGGGACGCCCGGCGCCGCCGGGTTTCGTCGA
GAGCGCCGCGCGCGCGGAGGCGTCCTTCTTCTTCCACCACGTCTTCGATC
CCCGGGAGCGCCGCTGCGTCCACTTTTGCGAGCCTGGTGGCAACAGCGGC
GGCGGCGGCGGCGACGGCGACGGGCGCGGTGACGACAGCGACGGCGACGG
CACTGTTATATATCAGGAGGACGACGACTTCGCCGAGGCCCCGGACTTTG
CGGCGCTGGGCGACCCGAGCCTCTTTCTAGGCGACTCGATCGGGGCCGAG
GACGCATTGCGGGTCGCTTCGGGGGTGCTAGATCCCGTCACGCTGGAACC
AGTGGAAGTTGCAGTCATAGGAAGGGCGGCGGCGGCGGCGCCGGGGCGCC
GGCAACGCGCACAAGCAACGATAGGAGCGGTGGCGACGGCGGGGGGCGCA
GGCCGGTGGGGGGTAACCCGACACAACAGCGGCAATGGCGGCGGCGGCAA
CAGCGGC
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