mRNA_P-wetherbeei_contig7864.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7864.1.1
Unique NamemRNA_P-wetherbeei_contig7864.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A836CCV2_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.100e-46
Identity = 84/165 (50.91%), Postives = 104/165 (63.03%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVKVDMSKFGIPQTRRRVFLG 507
            +VIDLFCG GGFS GA Q GA V+LA+D W++AL+VH  NHP ALH  + LGG   EF++ L G I   V  G +VHLHASPPCQNLS  N  RDE +G++LV W  ELV+ VR          +W++EQV N  +L           DM+  G+PQTRRRV  G
Sbjct:    2 HVIDLFCGAGGFSTGAAQEGAVVVLAVDGWRDALDVHAANHPGALHWCETLGGPPAEFAERLRGVIAEAVPPGEQVHLHASPPCQNLSQVNAGRDEGVGLALVAWCFELVDLVRPD--------SWTVEQVPNAALLRRFAHVPHGVYDMAAHGVPQTRRRVIFG 158          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A836CNB4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.830e-42
Identity = 84/165 (50.91%), Postives = 102/165 (61.82%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVKVDMSKFGIPQTRRRVFLG 507
            YVIDLFCG GGFSEGAR+AGA V+LA+D W+ AL+VH LNHP+  H  + LG D  EF+D L   I      G RVHLHASPPCQNL  AN  R ED GM LV+WS  + E +         S T ++EQVA+  +L   +       DMS+ G+PQ R RV  G
Sbjct:    3 YVIDLFCGAGGFSEGARRAGATVILAVDCWQMALDVHALNHPDVEHWLEELGEDPREFADRLRRVIADKAPPGGRVHLHASPPCQNLCGANRRRSEDEGMRLVEWSFRVAEALG--------SVTVTVEQVASPVLLRAYSHLPHRVYDMSEHGVPQIRTRVIFG 159          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A835ZAI0_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.060e-40
Identity = 81/169 (47.93%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   16 VIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKH----GGVKVDMSKFGIPQTRRRVFLGT 510
            V+DLFCG GGFSEGARQAGA V LA+DSW+ AL+ H   HPEA H  + LGGD+ EF+    G +   V  G R+HLH SPPCQ LSS NP  D   GM LV W L++V+ +R          +W++EQV +  +L L+ +     G ++ D  +FG+P  RRRV  GT
Sbjct:   14 VVDLFCGIGGFSEGARQAGASVALAVDSWRAALDAHASRHPEAEHWCEELGGDVAEFA----GRVRAAVPTGCRLHLHRSPPCQQLSSLNPGGDRVEGMRLVTWYLDVVDALRPH--------SWTMEQVPHPAVLRLLTERRAPFGVLRFD--EFGVPTARRRVIAGT 168          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A836CEM3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM3_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.090e-40
Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVKVDMSKFGIPQTRRRVFLG 507
            YVID+F GCGGF++GA+QAGA V+LA+DSWKEAL+VH LNHPE  H ++++GGD   F+  L    DL V  G  +H+H SPPCQ LS  N +R+E  G++LV+WS ++ E +         SFT  +EQV N  +L            M + GIPQTR RV  G
Sbjct:    2 YVIDVFSGCGGFTQGAKQAGATVILAVDSWKEALDVHALNHPETEHWHEVVGGDPSLFAGRLRAVADLKVPSGEHLHVHFSPPCQQLSGVNHSRNELKGLALVEWSFQVAELLCPD------SFT--VEQVRNPFLLRTYAHLPHRIYKMCEHGIPQTRVRVLFG 158          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A835YWN5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWN5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 7.320e-38
Identity = 80/165 (48.48%), Postives = 99/165 (60.00%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVKVDMSKFGIPQTRRRVFLG 507
            YVIDLFCG GGFSEGA +AGA V+LA+D WK AL+VH  NH +  H N+ LGGD  +F   L   +   V  G  VHLH SPPCQNLSS N  R+E  GM LV+W+  + + ++        SFT  +EQV N  +L            MS+ GIPQ+RRRV  G
Sbjct:    3 YVIDLFCGAGGFSEGASRAGAVVILAVDCWKAALDVHAANHGDCEHWNEPLGGDPAQFVARLRRVVSRRVPCGGLVHLHGSPPCQNLSSVNCMRNEREGMRLVEWTFAVGDLLQPD------SFT--VEQVPNAALLREYGHLPHSVYAMSEHGIPQSRRRVIFG 159          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A835YX35_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX35_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.360e-37
Identity = 78/169 (46.15%), Postives = 101/169 (59.76%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNH--PEAL--HLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVKVDMSKFGIPQTRRRVFLG 507
            Y+IDLFCG GGFSEGARQ+GA V+LA+D W+ AL+VH  NH  P A   H  + LGGD + F+  L   +   V  G  VHLHASPPCQNL  AN  R E  G+ LV+WS +L+E          +  ++++EQVA+  +L           DMS  G+PQ R+RV  G
Sbjct:    3 YLIDLFCGAGGFSEGARQSGAVVILAVDRWRAALDVHAANHTTPSASCEHWCEELGGDPEAFATRLRHVVSRRVPPGGHVHLHASPPCQNLCGANTRRREGEGLRLVEWSFKLMECC-------AEFHSFTVEQVASPTLLRTYEHIPHRVYDMSVHGVPQIRKRVIFG 164          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A835Z6C7_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.600e-36
Identity = 76/166 (45.78%), Postives = 104/166 (62.65%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSAN-PTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVK---VDMSKFGIPQTRRRV 498
            YVIDLF G GGFSEGARQAGA V+LA+D W+ AL+VH  NH +  H  + +GG   E +  L  FI  NV  G  VH+HASPPCQ LS AN  +RD D+G+ L +++L++V+ V           +W+IEQV+   +  L++  G VK   +   K+G+P  RRR+
Sbjct:    3 YVIDLFSGAGGFSEGARQAGAVVILAVDCWQAALDVHAANHLDCHHWREEVGGHPAELAGRLRAFIGANVPAGQLVHVHASPPCQRLSKANRSSRDTDVGLRLTRFALDVVQAVGCH--------SWTIEQVSAPAVRKLMDDRG-VKYRHLHFDKYGVPSIRRRL 159          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A836CC81_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC81_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.990e-36
Identity = 75/166 (45.18%), Postives = 105/166 (63.25%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLG-GDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSAN-PTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGVKVDMS--KFGIPQTRRRV 498
            +VIDLFCG GGFSEGARQAGA V+LA+D W+EAL+VH  NHP+A H  + +G GD  E +  L  F    +  GA VHLHASPPCQ+LS AN  +RD   G+ L +++L+++E  R          +W++EQV+   +  L +  G +   ++  K G+P  RRR+
Sbjct:    3 HVIDLFCGAGGFSEGARQAGAVVVLAVDCWREALDVHAANHPDAEHWCEEIGTGDPAELAQRLRAFAANALPPGAPVHLHASPPCQSLSKANRASRDTSGGLRLTRFALDVIEAARFD--------SWTVEQVSAPAVRGLFDARGVLYRHLACDKLGVPSIRRRL 160          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A835Z4N3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N3_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.740e-36
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 1
Query:   13 YVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQL 363
            Y+IDLFCG GGFSEGARQAGA V+LA+D WK AL+VH  NH +  H N+ LGG   +F+  L  FI   V  G RVHLHASPPCQNLS  N  R E IG+SLV W L++V+  R ++
Sbjct:   18 YLIDLFCGAGGFSEGARQAGAVVMLAVDCWKAALDVHAANHGDCEHWNEPLGGSAADFAGRLKDFIARKVPPGDRVHLHASPPCQNLSQINRRRQESIGLSLVAWCLDVVDLSRRRV 134          
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Match: A0A836CDD9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDD9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 9.230e-36
Identity = 73/167 (43.71%), Postives = 96/167 (57.49%), Query Frame = 1
Query:   16 VIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALHLNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDEDIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGV--KVDMSKFGIPQTRRRVFLGT 510
            V+DLFCG  GFSEGA QAGA V+LA+DSW  AL+ H   HPEALH  + LGGD+ EF+      +   V  GAR+H+H SPPCQ LSS     D   G+ LV W L LV+ +           +W++EQV +  +L L+ + G     +    +G+P  RRR   GT
Sbjct:    4 VVDLFCGIRGFSEGAAQAGASVVLAVDSWASALDAHASRHPEALHWREELGGDVAEFA----ARVRAVVPPGARLHMHGSPPCQQLSSLKQGGDRVEGLRLVTWYLNLVDALAPD--------SWTMEQVPHPAVLALLRERGAPFRVLRFDDYGVPNRRRRAIAGT 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7864.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCV2_9STRA7.100e-4650.91S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A836CNB4_9STRA1.830e-4250.91S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835ZAI0_9STRA1.060e-4047.93S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A836CEM3_9STRA5.090e-4047.88S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835YWN5_9STRA7.320e-3848.48S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835YX35_9STRA1.360e-3746.15S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835Z6C7_9STRA1.600e-3645.78S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A836CC81_9STRA3.990e-3645.18S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835Z4N3_9STRA4.740e-3658.12S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A836CDD9_9STRA9.230e-3643.71S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7864contigP-wetherbeei_contig7864:1572..2081 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1511.CLOST_0308
PFAMsDNA_methylase
Model size510
Max annot lvl186801|Clostridia
KEGG rclassRC00003,RC00332
KEGG koko:K00558
KEGG ReactionR04858
KEGG Pathwayko00270,ko01100,ko05206,map00270,map01100,map05206
KEGG ModuleM00035
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.2e-13
EggNOG OGsCOG0270@1|root,COG0270@2|Bacteria,1TSNX@1239|Firmicutes,2490C@186801|Clostridia,25TTT@186804|Peptostreptococcaceae
EC2.1.1.37
DescriptionC-5 cytosine-specific DNA methylase
Cds size510
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.4353108-CDS-P-wetherbeei_contig7864:1571..20811683187005.4353108-CDS-P-wetherbeei_contig7864:1571..2081Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7864 1572..2081 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7864.1.1prot_P-wetherbeei_contig7864.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7864 1572..2081 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7864.1.1

>prot_P-wetherbeei_contig7864.1.1 ID=prot_P-wetherbeei_contig7864.1.1|Name=mRNA_P-wetherbeei_contig7864.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
MTETYVIDLFCGCGGFSEGARQAGAKVLLAIDSWKEALEVHKLNHPEALH
LNQLLGGDLDEFSDFLIGFIDLNVAEGARVHLHASPPCQNLSSANPTRDE
DIGMSLVKWSLELVERVRTQLKESTKSFTWSIEQVANKRILDLINKHGGV
KVDMSKFGIPQTRRRVFLGT
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mRNA from alignment at P-wetherbeei_contig7864:1572..2081+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7864.1.1 ID=mRNA_P-wetherbeei_contig7864.1.1|Name=mRNA_P-wetherbeei_contig7864.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig7864:1572..2081+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGAAACGTATGTAATTGATCTGTTTTGTGGATGTGGAGGTTTTTC CGAAGGAGCTCGCCAGGCTGGTGCCAAAGTCTTGCTTGCCATTGATTCCT GGAAGGAAGCGCTTGAGGTGCATAAACTGAATCATCCAGAGGCGCTTCAC TTGAACCAGTTGCTTGGAGGAGATTTAGATGAATTTTCAGACTTTTTGAT TGGATTCATTGATCTGAACGTCGCAGAAGGGGCCCGAGTTCATCTACATG CCAGCCCACCGTGCCAAAACTTGAGTTCTGCAAACCCAACTCGTGACGAA GATATTGGAATGTCTCTTGTAAAATGGTCATTGGAACTCGTGGAACGTGT GCGCACCCAACTCAAAGAAAGTACAAAGTCATTTACCTGGTCAATAGAAC AAGTCGCAAACAAGAGAATACTTGATCTCATCAACAAACACGGGGGAGTG AAAGTCGACATGAGTAAGTTTGGGATCCCTCAAACCAGACGAAGGGTCTT TTTGGGAACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7864:1572..2081+

>mRNA_P-wetherbeei_contig7864.1.1 ID=mRNA_P-wetherbeei_contig7864.1.1|Name=mRNA_P-wetherbeei_contig7864.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig7864:1572..2081+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGAAACGTATGTAATTGATCTGTTTTGTGGATGTGGAGGTTTTTC
CGAAGGAGCTCGCCAGGCTGGTGCCAAAGTCTTGCTTGCCATTGATTCCT
GGAAGGAAGCGCTTGAGGTGCATAAACTGAATCATCCAGAGGCGCTTCAC
TTGAACCAGTTGCTTGGAGGAGATTTAGATGAATTTTCAGACTTTTTGAT
TGGATTCATTGATCTGAACGTCGCAGAAGGGGCCCGAGTTCATCTACATG
CCAGCCCACCGTGCCAAAACTTGAGTTCTGCAAACCCAACTCGTGACGAA
GATATTGGAATGTCTCTTGTAAAATGGTCATTGGAACTCGTGGAACGTGT
GCGCACCCAACTCAAAGAAAGTACAAAGTCATTTACCTGGTCAATAGAAC
AAGTCGCAAACAAGAGAATACTTGATCTCATCAACAAACACGGGGGAGTG
AAAGTCGACATGAGTAAGTTTGGGATCCCTCAAACCAGACGAAGGGTCTT
TTTGGGAACG
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