mRNA_P-wetherbeei_contig7855.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7855.1.1
Unique NamemRNA_P-wetherbeei_contig7855.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7855.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7855contigP-wetherbeei_contig7855:1325..1918 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008608747.1
PFAMsDnaJ
Model size594
Max annot lvl2759|Eukaryota
KEGG koko:K19374
Hectar predicted targeting categoryother localisation
Exons1
Evalue0.000584
EggNOG OGsCOG0484@1|root,KOG0714@2759|Eukaryota
Ec32 ortholog descriptionEsV-1-80 DnaJ domain protein
Ec32 orthologEc-06_006000.1
Descriptionprotein folding
Cds size594
COG categoryO
BRITEko00000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187004.8829834-CDS-P-wetherbeei_contig7855:1324..19181683187004.8829834-CDS-P-wetherbeei_contig7855:1324..1918Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7855 1325..1918 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7855.1.1prot_P-wetherbeei_contig7855.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7855 1325..1918 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7855.1.1

>prot_P-wetherbeei_contig7855.1.1 ID=prot_P-wetherbeei_contig7855.1.1|Name=mRNA_P-wetherbeei_contig7855.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp
MTYYSILSIDPSASVRDIRGACKRMISAIRGMESKSDYEKSQLIEAVTEM
RTILTDPSKRATYDESIGIETVSKWDSTAAPRWLVPMGTHHHSPITPPRA
HAHANGFSDTQLVPFDQWSPFSSGMMKGMFESIIPTDIQQVAKNASSIGS
SSNGSFTFLEFKRTRGSDGWHESGVHQMGDLNRDNLVEKRFSRHQPF*
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mRNA from alignment at P-wetherbeei_contig7855:1325..1918+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7855.1.1 ID=mRNA_P-wetherbeei_contig7855.1.1|Name=mRNA_P-wetherbeei_contig7855.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig7855:1325..1918+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTTATTACTCAATCCTTTCCATAGACCCTTCGGCGTCCGTACGGGA
CATTCGAGGCGCGTGCAAGCGCATGATATCCGCGATAAGAGGCATGGAAT
CAAAAAGTGATTACGAAAAGTCACAGCTCATCGAAGCCGTCACAGAAATG
AGAACGATCCTAACAGATCCGTCAAAACGAGCCACGTACGACGAGAGCAT
TGGGATTGAAACCGTTTCTAAGTGGGATTCAACCGCCGCGCCTCGGTGGC
TTGTCCCAATGGGAACACATCATCACTCGCCAATCACACCCCCTCGTGCA
CATGCACATGCAAACGGGTTCTCTGACACACAATTGGTTCCGTTTGACCA
ATGGAGTCCCTTTTCATCTGGAATGATGAAGGGTATGTTTGAATCAATTA
TACCTACCGACATTCAACAGGTGGCCAAGAATGCATCGAGCATTGGCTCG
TCGAGCAACGGATCGTTCACGTTCCTGGAGTTCAAGCGTACGCGCGGCAG
TGACGGATGGCACGAATCAGGAGTGCATCAGATGGGCGACCTCAATCGTG
ACAATCTAGTTGAGAAACGATTTTCTCGACACCAGCCGTTTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7855:1325..1918+

>mRNA_P-wetherbeei_contig7855.1.1 ID=mRNA_P-wetherbeei_contig7855.1.1|Name=mRNA_P-wetherbeei_contig7855.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig7855:1325..1918+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTTATTACTCAATCCTTTCCATAGACCCTTCGGCGTCCGTACGGGA
CATTCGAGGCGCGTGCAAGCGCATGATATCCGCGATAAGAGGCATGGAAT
CAAAAAGTGATTACGAAAAGTCACAGCTCATCGAAGCCGTCACAGAAATG
AGAACGATCCTAACAGATCCGTCAAAACGAGCCACGTACGACGAGAGCAT
TGGGATTGAAACCGTTTCTAAGTGGGATTCAACCGCCGCGCCTCGGTGGC
TTGTCCCAATGGGAACACATCATCACTCGCCAATCACACCCCCTCGTGCA
CATGCACATGCAAACGGGTTCTCTGACACACAATTGGTTCCGTTTGACCA
ATGGAGTCCCTTTTCATCTGGAATGATGAAGGGTATGTTTGAATCAATTA
TACCTACCGACATTCAACAGGTGGCCAAGAATGCATCGAGCATTGGCTCG
TCGAGCAACGGATCGTTCACGTTCCTGGAGTTCAAGCGTACGCGCGGCAG
TGACGGATGGCACGAATCAGGAGTGCATCAGATGGGCGACCTCAATCGTG
ACAATCTAGTTGAGAAACGATTTTCTCGACACCAGCCGTTTTGA
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