mRNA_P-wetherbeei_contig7852.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7852.1.1
Unique NamemRNA_P-wetherbeei_contig7852.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: D8LUB1_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB1_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 6.990e-96
Identity = 176/378 (46.56%), Postives = 213/378 (56.35%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGYAGVCNEAACPRGPAWFDEALADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRD--HNTTTPGEFEVQRLTCTGDSG----SFSLRFRQATTTAIAADATLDELEAALELIATVGDVELNSTG------TTA--CSAAGDAPVYIRFKTELGRLPDLEVYWST--LETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C+GHG+CSGAP +TC+C  G+ G C + +CP GPAWFDEA  D TAH  AECS  G+CDR TG+C C   F G AC+RM C NDC+G+G+CLS+RQL L   D   VP    YGS      TWDAD V GC CD                                   GYQG   GPSY N SDWTG DCS ++CPTGDD +    N+T   +FE Q LTCT  SG    SFS+ FRQ TT  +  ++TL +LE ALE ++T+GDVE+   G       TA  C+++   P  I FKTELG LP L +  ST          T  + VAE   G+KLD  CS HG CD   G C C  GW SSDG+  +GHR DCG+
Sbjct:  293 CHGHGVCSGAPYFTCSCDDGWEGNCAQRSCPEGPAWFDEAATDGTAHAYAECSARGLCDRETGVCACSDGFTGDACQRMTCPNDCNGNGKCLSLRQLGLLALDSDYVPSPFVYGSTAGNQLTWDADAVYGCYCD---------------------------------WMGYQGG--GPSYTNLSDWTGYDCSRKSCPTGDDRKAAMFNST---DFERQNLTCTLGSGVVNASFSISFRQGTTDLMTGNSTLLDLEQALEGLSTIGDVEVTMVGHDSDSHATAMLCNSSSGHPASIVFKTELGDLPLLSIATSTSXXXXXXXXSTVSLEVAEVTRGTKLDAECSRHGYCDYAEGECVCFDGWASSDGDGAVGHRRDCGW 632          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: A0A7S2BPD4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BPD4_9STRA)

HSP 1 Score: 241 bits (615), Expect = 5.690e-72
Identity = 151/385 (39.22%), Postives = 202/385 (52.47%), Query Frame = 1
Query:    1 CYGHGICSGAP-EYTCTCQQGYAGVCNEAACPRGPAWFDEALADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLND-----CSGHGRCLSMRQLA-LGRTDEYLVPDAVSYGSFTNAAAT-WDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRD----HNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELNSTGTTA--------CSAAGDAPVYI--RFKTELGRLPDLEVYWSTLETSSSTDTAG-IAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            CYGHG C+G   ++ C C  GY G C    CP GPAWFDEA+ ++ AH  AECSNMG C+  TG C C+  FEGAACERM C  D     CSGHG+CLSM   A L RT+  L P  +SYG F  + AT WDAD + GC CD                                   GYQ         N SDWTG DCS RTCP+G    +     N      FE+Q +TCT  SG+F+L FR  +T  IA++AT   L+  LE ++T+G V +      A        CSA+   P+Y+  +F +ELG LP L        T++     G +++ E + G+K++  C+N+G+C+   G C C  G+ +S+ +   G+RGDCG+
Sbjct:  127 CYGHGYCAGLETDFKCECDDGYFGNCQMLECPTGPAWFDEAIMNNDAHNEAECSNMGTCEYKTGTCACNDGFEGAACERMSCPTDELGNVCSGHGQCLSMADAAKLTRTNGVLTP--ISYGGFNMSNATAWDADKIFGCVCD---------------------------------SKGYQLPGQ---LANLSDWTGYDCSRRTCPSGTKRSNVGPGQNNAYNSSFEIQNMTCTATSGTFTLSFRSESTEPIASNATKAILKQRLEELSTIGQVVITMHNQDASAYRFDSVCSASAVTPIYVGVKFISELGNLPML--------TANDAGLVGSVSIWETVPGTKVEFECANNGLCNDQTGFCDCFRGYTTSNADGSYGYRGDCGF 465          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: K3X6W1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6W1_GLOUD)

HSP 1 Score: 242 bits (618), Expect = 3.840e-71
Identity = 146/367 (39.78%), Postives = 184/367 (50.14%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGYAGV-CNEAACPRGPAWFDEALADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRD--HNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELN-STGTTACSAAGDAPVYIRFKTELGRLPDLE-VYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C G G C G   Y C C +G+ G  CNE  CP+G AWFD  +AD  AH+L ECSN G+CDR  G C C+  F GAAC RM C NDCSGHG C +M +LA  R          +YG+  N   TWD D+V GC C                                                 A+ W G DCS +TCPTGDDP    +   +P E EVQ LTCTG+SG FSL+FR A T  +    +   L+ AL  +  +GDV +  S G  AC++AG   + + F  + G LP L  +    L  + + D AG +      G+K +  CSN G+C+ V GTC C  G+ SSDGN   G RGDCGY
Sbjct:  289 CSGQGTCRGPSTYDCICNEGFTGGDCNERECPKGKAWFDLPIADDVAHQLVECSNAGVCDRLKGDCVCNSGFTGAACNRMTCPNDCSGHGTCYTMEELAK-RAQLNGEQMGWTYGAVPNKKETWDYDMVRGCLC-------------------------------------------------AAGWEGYDCSKQTCPTGDDPMTVYNPNGSPQENEVQVLTCTGNSGFFSLKFRDAVTPQLPFSVSASSLQIALSALTAIGDVTVTYSNGAVACTSAGTNTIRVEFLNDFGDLPPLRWILDGALVMTINEDGAGSSRR----GTKENAVCSNRGVCNTVGGTCRCAFGFTSSDGNGKEGDRGDCGY 601          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: A0A6A3JA59_9STRA (EGF-like domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JA59_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.230e-66
Identity = 149/374 (39.84%), Postives = 181/374 (48.40%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGYAGV-CNEAACPRGPAWFDEAL-ADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRT--DEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELNS-------TGTTACSAAGDAPVYIRFKTELGRLPDLE-VYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C G G C G P Y C C +G+ G  CNE  CP+G +WFD  +    TAH L ECSN G CDR  G C C   F GAAC RM C NDCSGHG C +M QLA   T   E +   A +YG+  N   TWD D+V GC C                               SP                   W G DC+LR+CPTGDDP     T   + EVQ L C G SG F+L+FR A T  +  +     L +ALE + T+G V +         TG+ AC+AAG   + I F T  G LP L  +    L  + S D  G +V     G+K +  CSN GIC+ + G C C  G+ SSDG  G G RGDCGY
Sbjct:  251 CSGQGTCRGPPTYDCICNEGFTGGDCNERLCPKGRSWFDRPIDTTDTAHALVECSNAGECDRTKGDCICSAGFTGAACNRMFCPNDCSGHGTCYTMEQLAKSATLNGETM---AWTYGAVPNKKETWDYDMVQGCLC-------------------------------SPG------------------WEGHDCALRSCPTGDDPM----TLRQQNEVQILVCKGSSGFFTLKFRDAATPQLPFNVPAASLGSALEALTTIGKVSVTYSTDTNGVTGSPACNAAGSNAMRIEFLTNFGNLPQLRWILDGALTLTISVDGVGGSVQ----GTKEEAVCSNRGICNHLTGVCRCAYGFTSSDGFGGEGDRGDCGY 564          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: A0A8K1CIH4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIH4_PYTOL)

HSP 1 Score: 230 bits (586), Expect = 1.870e-66
Identity = 145/369 (39.30%), Postives = 183/369 (49.59%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGY-AGVCNEAACPRGPAWFDEALADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGR--TDEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTT--TPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELN-STGTTACSAAGDAPVYIRFKTELGRLPDLE-VYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C G G C G P Y C C +G+  G CNE  CP+G AWFD   A+  AH L ECSN G+CDR  G C C+  F GAAC R+ C NDCSGHG CL+M QLA       E +     +YG+  N   TWD D+V GC C                                                 ++ W G DCS ++CPTGDDP   +T+   P + EVQ L C G SG FSLRFR A T  +   A+   ++ AL  + TVGDV ++   GT AC+AAG   + I F  + G LP L  +    L    + D  GI  ++   G+K +  CSN G C+   G C C+ G+ SSD N   G RGDCGY
Sbjct:  289 CSGQGTCRGPPTYDCICNEGFIGGDCNERECPKGKAWFDLPSANDVAHDLVECSNAGVCDRQKGDCICNTGFTGAACNRLVCSNDCSGHGTCLTMEQLAKTAQVNGERM---GFTYGAVPNKKETWDYDMVRGCLC-------------------------------------------------SAGWEGHDCSRQSCPTGDDPMTTHTSPGVPQQNEVQELFCMGSSGFFSLRFRDAVTPQLPFSASAAAVQKALSDLTTVGDVVVSYGIGTMACTAAGTNAIRIEFINDFGDLPSLRWIIDGALTMRVNVD--GIGGSQM--GTKEEAVCSNRGRCNFATGQCRCINGFTSSDANGKEGARGDCGY 601          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: D0RMF1_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMF1_PHYIT)

HSP 1 Score: 220 bits (561), Expect = 1.750e-65
Identity = 144/371 (38.81%), Postives = 173/371 (46.63%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGYAGV-CNEAACPRGPAWFDEALADS-TAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVEL-------NSTGTTACSAAGDAPVYIRFKTELGRLPDLE-VYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCG 1083
            C G G C G P Y C C +G+ G  C E  CP+G AWFD     + TAH L ECSN G CDR  G C C   F GAAC RM C NDCSGHG C +M QLA   T       + +YG+  N   TW+ D++ GC C                                                 +S W G DCSLR+CPTGDDP     T   + EVQ L C G SG FSL+FR A T  +        L +ALE + TV  V +         TG+ AC AAG   + I+F T  G LP L  +    L  + S D     V   + G+K D  CSN G C+ + G C C  G+ SSDG  G G RGDCG
Sbjct:   27 CSGKGTCRGPPTYDCICNEGFTGGDCTERLCPKGRAWFDRPTDTADTAHALVECSNAGECDRTKGECVCLSGFTGAACNRMVCPNDCSGHGTCYTMEQLAKRATVNGETM-SFTYGAVPNKKETWEHDMIQGCLC-------------------------------------------------SSGWEGHDCSLRSCPTGDDPM----TLRQQNEVQLLVCKGSSGFFSLKFRDAATPQLPFTVPAASLASALEALTTVEKVSVAYSTDTNGVTGSPACDAAGSNTIRIKFLTNFGDLPPLRWILDGALTLTLSVD----GVESSVRGTKEDAVCSNRGFCNHLTGVCRCTYGFTSSDGFGGEGDRGDCG 339          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: A0A2R5GRS9_9STRA (Multiple epidermal growth factor-like domains protein 10 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRS9_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.800e-65
Identity = 144/377 (38.20%), Postives = 193/377 (51.19%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGY-AGVCNEAACPRGPAWFDEALADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLN---DCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELN-STGTTACSAAGDAPVYIRFKTELGRLPDLEVYWSTL----------ETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C GHG CS +PE+ CTC  G+ +G C+   C +G +WFD  ++ + AH+L ECSNMGICDR TG+C CH  F GAAC++M+C     +CSG+G+CL M QLA   TD   +  A +YG   N    WD D++ GC CD                                   GY+G+               DCSL +CPTGDDP     T   +FE Q L C  + GSF L FRQ  T  I  +A    L AAL  I ++ DVE+  S+GT+ C+        I F  ELG +PDL  + S+           E + +T+ A I   + + G+K +V CS  G+C+   GTC C  G+ SS+GN   G RGDCG+
Sbjct:  339 CSGHGTCSQSPEFRCTCSLGWDSGDCSVRTCAKGKSWFDHPVSANRAHQLQECSNMGICDRVTGVCVCHTGFTGAACDQMQCPGSPTECSGNGQCLFMSQLANKATDNGDLA-ATTYGQTPNDPYRWDYDMIKGCLCD----------------------------------EGYEGH---------------DCSLMSCPTGDDPE----TLGQDFETQVLRCQANGGSFRLYFRQHQTELIPHNADEAALRAALSAIDSITDVEVTFSSGTSFCTDDASNVASIVFTQELGDVPDLTAFISSFDADLAHGTNPEIAIATNGASIDSVQSVRGTKENVVCSARGVCNHETGTCECFQGFASSNGNGSSGDRGDCGW 661          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: D0NFI0_PHYIT (Tenascin-like protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NFI0_PHYIT)

HSP 1 Score: 226 bits (577), Expect = 1.200e-64
Identity = 147/372 (39.52%), Postives = 176/372 (47.31%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQGYAGV-CNEAACPRGPAWFDEALADS-TAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSFTNAAATWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVEL-------NSTGTTACSAAGDAPVYIRFKTELGRLPDLE-VYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C G G C G P Y C C +G+ G  C E  CP+G AWFD     + TAH L ECSN G CDR  G C C   F GAAC RM C NDCSGHG C +M QLA   T       + +YG+  N   TW+ D++ GC C                                                 +S W G DCSLR+CPTGDDP     T   + EVQ L C G SG FSL+FR A T  +        L +ALE + TVG V +         TG++AC AAG   + I F T  G LP L  +    L  + S D  G +V     G+K D  CSN G C+ + G C C  G+ SSDG  G G RGDCGY
Sbjct:  350 CSGKGTCRGPPTYDCICNEGFTGGDCTERLCPKGRAWFDRPTDTADTAHVLVECSNAGECDRTKGECVCLSGFTGAACNRMVCPNDCSGHGTCYTMEQLAKRATVNGETM-SFTYGAVPNKKETWEHDMIQGCLC-------------------------------------------------SSGWEGHDCSLRSCPTGDDPM----TLRQQNEVQLLVCKGSSGFFSLKFRDAATPQLPFTVPAASLASALEALTTVGKVSVAYSTDTNGVTGSSACDAAGSNTIRIEFLTNFGDLPPLRWILDGALTLTLSVDGVGGSVR----GTKEDAVCSNRGFCNHLTGVCRCTYGFTSSDGFGGEGDRGDCGY 663          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: D7FTF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTF6_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 7.450e-64
Identity = 170/388 (43.81%), Postives = 195/388 (50.26%), Query Frame = 1
Query:    1 CYGHGICSGAPEYTCTCQQG-YAGVCNEAACPRGPAWFDEALADSTAHRL-AECSNMGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSF-------TNAAA---TWDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYG---YQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELNSTGTTACS------AAGDAPVY-----IRFKTELGRLPDLEVYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCGY 1086
            C G G C+ A    CTC    Y G C+   CP G AWFDEA AD+ AH   AEC  MG C+ ATG C C   + GAACER+ C  DC+G+GRCL M +LA  R D    PD   YGS        T+  A   TWD D++ GC CD   S                    A  PR   R +    Y  NS  P       W G  CS RTCPTGDDPR    TTPGEFEVQ + CT  SGSF++ FR ATT AIA DAT  E+ AALEL+ T     L+  G+ A S      A   + VY     + F TELG L  L  Y S      +T+          AGSK +  C   GICD   G CTCL GW SSDGN   G RGDCGY
Sbjct:  503 CAGKGACNNATG-GCTCHPDFYGGDCSIRKCPTGKAWFDEARADNAAHSYGAECGAMGNCNHATGECVCREGWTGAACERLGCDADCNGNGRCLPMFRLAQLREDNG-EPDPTVYGSTDLVRPFGTSVYASPETWDFDMMYGCLCD---SGGRGG-----DGDTDGFLGGAYRPRVGARAFVSGLYTDNSKLPG------WGGYACSRRTCPTGDDPR----TTPGEFEVQTVACTLSSGSFTMTFRDATTEAIAFDATTSEVTAALELLPTPDGCPLSRVGSVAVSFTSGGSACDSSWVYGEGIKVTFLTELGGLSSL--YTSPTFEVDTTE----------AGSKENSECGGRGICDFDTGLCTCLDGWASSDGNGSTGDRGDCGY 858          
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Match: A0A8J2X084_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X084_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.040e-63
Identity = 153/394 (38.83%), Postives = 198/394 (50.25%), Query Frame = 1
Query:    1 CYGHGICSGAPE--YTCTCQQGYAGVCNEAACPRGPAWFDEALADSTAHRLAECSNMGICDRATGICRCHPMFEGAACERMRCL-----NDCSGHGRCLSMRQLALGRTDEYLVPDAVSYGSFTNAAAT-WDADVVSGCSCD*CSSDAAAAVVPXXXXXXXXXXXXAPTPRTSPRRYGYQGNSDGPSYHNASDWTGSDCSLRTCPTGDDPRDHNTTTPGEFEVQRLTCTGDSGSFSLRFRQATTTAIAADATLDELEAALELIATVGDVELNS-----------TGTTACSAAGDA----PVY----------IRFKTELGRLPDLEVYWSTLETSSSTDTAGIAVAEYIAGSKLDVPCSNHGICDPVAGTCTCLGGWVSSDGNSGMGHRGDCG 1083
            C+GHG C G PE  ++C C +G+ G CN ++CP+GPAWFD+A    +AHRLAECSN G CD ATG+CRC   FEG ACER+ C      + CSGHG CL++RQLA   +     P  ++YGS  +  +T WDAD +  C C                                    GY  NS    ++N S WTG DCS R CPTGD+P      +  +FE Q + C    GS  L FR ATT  IA DA+  E++ ALE + T+G V +             +G   C++  DA     VY          I F +ELG +P L V       SS      + V E ++GSK DV CS+ G CD + G C C   + SSD N+  G R DCG
Sbjct:  893 CWGHGYCGG-PETNHSCICDEGWYGNCNVSSCPKGPAWFDQADGPRSAHRLAECSNAGTCDHATGLCRCGIGFEGGACERLSCPVGPNGDTCSGHGECLTLRQLAQDASYNG-EPTPIAYGSGLSENSTAWDADFIQHCKC---------------------------------YEPGYGNNS----WYNLSAWTGYDCSKRACPTGDNPF----VSGRQFERQYVECKATGGSLQLTFRGATTQPIAYDASSIEVKRALEALHTIGSVGVEGDVFCVPPCATCSGPNTCASDSDAHKACDVYGYPLNVGNFSIEFTSELGDVPPLRV------DSSKLLEGTVKVGEAVSGSKADVVCSHRGTCDELTGDCECFAAYTSSDANNSFGLREDCG 1237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7852.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUB1_ECTSI6.990e-9646.56EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2BPD4_9STRA5.690e-7239.22Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K3X6W1_GLOUD3.840e-7139.78Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A3JA59_9STRA1.230e-6639.84EGF-like domain-containing protein n=5 Tax=Phytoph... [more]
A0A8K1CIH4_PYTOL1.870e-6639.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0RMF1_PHYIT1.750e-6538.81Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A2R5GRS9_9STRA2.800e-6538.20Multiple epidermal growth factor-like domains prot... [more]
D0NFI0_PHYIT1.200e-6439.52Tenascin-like protein n=12 Tax=Phytophthora TaxID=... [more]
D7FTF6_ECTSI7.450e-6443.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2X084_9STRA1.040e-6338.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7852contigP-wetherbeei_contig7852:158..2227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LUB1
Model size1089
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.42e-22
EggNOG OGsKOG1225@1|root,KOG1225@2759|Eukaryota
Descriptionregulation of canonical Wnt signaling pathway involved in osteoblast differentiation
Cds size243
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7852.1.1prot_P-wetherbeei_contig7852.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7852 1414..2065 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187004.6340415-UTR-P-wetherbeei_contig7852:157..3641683187004.6340415-UTR-P-wetherbeei_contig7852:157..364Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7852 158..364 -
1683187004.6520488-UTR-P-wetherbeei_contig7852:650..8371683187004.6520488-UTR-P-wetherbeei_contig7852:650..837Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7852 651..837 -
1683187004.6660013-UTR-P-wetherbeei_contig7852:1123..14131683187004.6660013-UTR-P-wetherbeei_contig7852:1123..1413Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7852 1124..1413 -
1683187004.716913-UTR-P-wetherbeei_contig7852:2065..22271683187004.716913-UTR-P-wetherbeei_contig7852:2065..2227Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7852 2066..2227 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187004.6807954-CDS-P-wetherbeei_contig7852:1413..14141683187004.6807954-CDS-P-wetherbeei_contig7852:1413..1414Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7852 1414..1414 -
1683187004.6923995-CDS-P-wetherbeei_contig7852:1586..17931683187004.6923995-CDS-P-wetherbeei_contig7852:1586..1793Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7852 1587..1793 -
1683187004.7049427-CDS-P-wetherbeei_contig7852:2030..20651683187004.7049427-CDS-P-wetherbeei_contig7852:2030..2065Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7852 2031..2065 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7852.1.1

>prot_P-wetherbeei_contig7852.1.1 ID=prot_P-wetherbeei_contig7852.1.1|Name=mRNA_P-wetherbeei_contig7852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
MGICDRATGICRCHPMFEGAACERMRCLNDCSGHGRCLSMRQLALGRTDE
YLVPDAVSYGSFTNAAATWDADVVSGCSCD*
back to top

mRNA from alignment at P-wetherbeei_contig7852:158..2227-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7852.1.1 ID=mRNA_P-wetherbeei_contig7852.1.1|Name=mRNA_P-wetherbeei_contig7852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2070bp|location=Sequence derived from alignment at P-wetherbeei_contig7852:158..2227- (Phaeothamnion wetherbeei SAG_119_79)
TGCTACGGCCACGGCATCTGCTCGGGCGCCCCGGAATACACCTGCACCTG TCAGCAGGGATACGCCGGCGTCTGCAATGAAGCGGCCTGCCCGCGGGGGC CGGCATGGTTCGACGAGGCGCTGGCGGACAGCACCGCGCACCGCCTCGCC GAGTGCAGCAACATGGGGATCTGCGACCGCGCCACGGGTATCTGCAGGTG GGACGGTACAAACTTTATTCTTGTTTCAGGTTTTCCATTGGTTGAGGTGG TGACGATTGGTCTCCCACAAGCCTCCGGAAAGGAGTCAAGCGAAGCATTT TTTCCCCTCTTTCTGGCTCCGCTATCGACAATGGCCGCTTCATTGGATTC TTGCGCTGTGCAGCTGCGTCTTAGCTTCCATTGAATGTTTTTTTGCTCTG CTGTCACTCTTCTCTCTCTTTCCTTCTGCCATAGGTGCCATCCAATGTTC GAAGGGGCCGCGTGCGAACGTATGCGGTGCCTCAACGACTGCAGCGGCCA CGGGCGGTGCCTCTCCATGCGGCAGCTCGCCCTGGGGCGGACGGACGAGT ATTTGGTGCCGGACGCCGTCTCGTACGGCTCCTTTACGAACGCCGCAGCG ACGTGGGACGCTGATGTCGTCTCTGGCTGTTCATGCGATTGGTGCGTGGT GTTCTGCTCCGCAAAAAAATCAGTTGTATACAGCACTCTGTGGATGTGGA TGTTCTGTTACTTTGGGCGAGGGTGGGGACTGAAGGGGATAATGTAAATT GAAGCCCTGCAACAATAATGCGTACTGCCGCTCCTTGCTCAGTCTGACCG CTGCTCATCACAGATGTTCTTCTGATGCCGCTGCCGCTGTCGTCCCCTCC GCATCCGCCGCTGCGGCTGCCGCCATCGCTGCCGCCCCAACACCCCGCAC CTCTCCTCGCAGGTACGGCTACCAAGGCAACAGCGATGGGCCGTCCTACC ACAACGCCTCCGACTGGACGGGCTCCGACTGCAGCCTCCGGACGTGCCCC ACGGGCGACGACCCGCGGGACCACAACACGACGACGCCGGGGGAGTTTGA GGTGCAGCGGCTGACGTGCACCGGGGACAGCGGCAGCTTCAGCCTCCGGT TCCGGTGAGCGAATAGCTTTCTATTCTTGAGAATGGCGCCCTTTGCTTTT CTCGATTGCTTGAGAGTGGCGCCATTTTGCCTATTGACGGCGATTTTGCC TTTTCTGGATTATCTTAGGTGTGGTCGTAAATAAAACAGTAGAATGACCC ATACATTCCAGCTGGCTTTTGGACTACTTGAGAAAAGGGCCTTCAAGTGA CGGCTGTGTCTTTTCTCCTTCCCTCAATACCCTAACATTTGATTAATGAC ATACTCCTTCCCTCATCTTCTCGTGGCGCCGCCGCTGCAGGCAAGCGACG ACCACTGCCATTGCGGCCGACGCCACCCTCGACGAGCTCGAGGCCGCGCT GGAGCTGATCGCCACCGTCGGTGACGTCGAGCTGAATTCTACTGGCACCA CGGCGTGCTCGGCGGCGGGCGACGCGCCGGTTTACATTCGGTTCAAGACG GAGCTCGGAAGGCTGCCGGATCTCGAGGTGCATCGGACAGACCGCCGATG GACAGCTGATGGACCGCCAGACCTTTGGATGGGCGGCATGGCGTCAGGGC GGCGGCGGGTGCCGGGTGGCGTGGGCGGGTTGCGGCGCCAAATGGGTGGT GGTGCGACCTCAGCTGTCTAGCATGGGAGGCACACGGCTGCAAGATTGCA GCGGACGTGACGCGTTGCTTCTCGTGACGCAGGTCATGGGACCCGCCCGC TTCACTCTTCGTTCCACTTCCCAATAAACCCTTCAACCCTTATCCCTCAT CGCGTTCCGTTAGGTGTACTGGTCCACTCTGGAAACATCATCCTCCACGG ATACGGCCGGCATCGCCGTGGCAGAATACATCGCCGGCAGCAAGCTCGAC GTGCCGTGCTCCAACCACGGGATCTGCGATCCCGTCGCCGGCACCTGCAC ATGCCTTGGCGGCTGGGTATCCAGCGACGGCAACAGCGGCATGGGCCACC GGGGCGACTGCGGTTACAAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7852:158..2227-

>mRNA_P-wetherbeei_contig7852.1.1 ID=mRNA_P-wetherbeei_contig7852.1.1|Name=mRNA_P-wetherbeei_contig7852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig7852:158..2227- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGATCTGCGACCGCGCCACGGGTATCTGCAGGTGCCATCCAATGTT
CGAAGGGGCCGCGTGCGAACGTATGCGGTGCCTCAACGACTGCAGCGGCC
ACGGGCGGTGCCTCTCCATGCGGCAGCTCGCCCTGGGGCGGACGGACGAG
TATTTGGTGCCGGACGCCGTCTCGTACGGCTCCTTTACGAACGCCGCAGC
GACGTGGGACGCTGATGTCGTCTCTGGCTGTTCATGCGATTGA
back to top