mRNA_P-wetherbeei_contig7850.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.710e-30 Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 1 MKASKAARGSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQTESPLRSKREGFLNQFYAG 339
MK+ +R T++PA QLYR I KE+PR+L IYD+D D AR A+ F+ N +++DPRVVD L+ KGYM+LEET +Q+KQKTHL+R+L P + R+ ++ F+++F AG
Sbjct: 10 MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPS-AHNDARAVKDDFMDKFMAG 121
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: H3GMX3_PHYRM (Complex1_LYR_dom domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=H3GMX3_PHYRM) HSP 1 Score: 108 bits (269), Expect = 5.290e-28 Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 7 ASKAARGSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQT---ESPLRSKREGFLNQFYAG 339
A KAA+ S S+PAV LYR I K++PRVL +YD+ + AR A+ F+++A V+DPRVVDMLI+K MELEETL+Q+KQK HLM++LE Q PL + L +FYAG
Sbjct: 7 AEKAAQASASSPAVTLYRYITKQVPRVLTLYDIPMEPADARLAVQALFRQHAAVKDPRVVDMLITKANMELEETLMQWKQKVHLMKLLEEGQALRQPKPLEDSVDQALEKFYAG 120
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: A0A6A3EKI3_9STRA (Complex1_LYR_dom domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EKI3_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.490e-26 Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 7 ASKAARGSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQTESPLRSKR------EGFLNQFYAG 339
A KAA STS+PAV LYR I K++PRVL +YD+ + AR A+ F+++A V+DPRVVDMLI+K MELEETL+Q+KQK HL+++LE Q LR+ + E L++F+AG
Sbjct: 7 AEKAAAASTSSPAVTLYRYITKQVPRVLTLYDIPMEPADARLAVQALFRQHATVKDPRVVDMLITKANMELEETLMQWKQKVHLVKLLEEGQA---LRAPKQQVDSVEQSLDKFFAG 120
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA) HSP 1 Score: 102 bits (254), Expect = 4.360e-26 Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 25 GSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRIL 270
G ++AP + LYR I +E+PRVL IYD+D D VAR + F+KN +++DP V+ +++SKGYMELEET+LQFKQ+THLMR+L
Sbjct: 18 GGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVARRKVNELFRKNGHLQDPEVIKIVVSKGYMELEETVLQFKQRTHLMRLL 99
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: A0A0P1B7E0_PLAHL (NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7E0_PLAHL) HSP 1 Score: 102 bits (255), Expect = 6.810e-26 Identity = 56/113 (49.56%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 7 ASKAARGSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQT--ESPLRSKREGFLNQFYAG 339
A KA+ ST++PAV LYR I K++PRVL +YD+ + AR A+ F+++A V+DPR+VDMLI+K MELEETL+Q+KQK HL+ +LE QT + L + + L +F+AG
Sbjct: 7 AEKASAASTASPAVTLYRYITKQVPRVLTLYDISMEPSEARLAVQALFREHAEVKDPRIVDMLITKANMELEETLMQWKQKVHLLTLLERAQTLRQPKLVNSVDQSLEKFFAG 119
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: D0MZ75_PHYIT (Complex1_LYR_dom domain-containing protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=D0MZ75_PHYIT) HSP 1 Score: 102 bits (254), Expect = 9.930e-26 Identity = 57/114 (50.00%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 7 ASKAARGSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQT---ESPLRSKREGFLNQFYAG 339
A KAA S ++PAV LYR I K++PRVL +YD+ + AR A+ F+++A+V+DPRVVDMLI+K MELEETL+Q+KQK HL+ +L+ Q +PL + L +FYAG
Sbjct: 7 AEKAAAASKASPAVTLYRYITKQVPRVLTLYDIPMEPAEARLAVQALFRQHADVKDPRVVDMLITKANMELEETLMQWKQKVHLVTLLDHAQALRQPTPLVDSVDQALEKFYAG 120
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: A0A4D9D5Z3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z3_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.580e-25 Identity = 52/98 (53.06%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 40 PAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQTESPLRSKREGFLNQFY 333
P VQLYR I KELPRVL IYD D AR + F+KNA+++DP +VDML+ KGYMELEETL+Q+KQKTHL+R+L TE+P + + + + +
Sbjct: 19 PVVQLYRTISKELPRVLTIYDADLAPAEARAQVQVLFRKNAHLQDPVIVDMLVKKGYMELEETLMQWKQKTHLLRLLAAD-TEAPRKYREKNTFTEKF 115
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: K3W7P5_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7P5_GLOUD) HSP 1 Score: 101 bits (251), Expect = 3.630e-25 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 25 GSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQTESPLRSKR-------EGFLNQFYAG 339
G TS+PAV LYR I K++PRVL +YD+ + AR A+ F+K+A+V+DPRVVDMLI+K MELEETL+Q+KQK HL+ +LE + + LR+ + E L FYAG
Sbjct: 12 GKTSSPAVTLYRYITKQVPRVLTLYDISMEPAEARLAVQALFRKHADVKDPRVVDMLITKANMELEETLMQWKQKVHLLTLLE---SGAALRADKKNDVKTVEDSLANFYAG 120
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: A0A024FTL2_9STRA (Complex1_LYR_dom domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024FTL2_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.240e-25 Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 34 SAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQTESPLRS-----KREGFLNQFYAG 339
S+PAV LYR IIK++PRVL +YD+ + AR A+ F+KNAN++DPRVVDMLI+K MELEETLLQ+KQK HL+ +LE T LR+ K++ F N F AG
Sbjct: 15 SSPAVTLYRYIIKQVPRVLTLYDITMEPSEARLAIQALFRKNANIKDPRVVDMLITKANMELEETLLQWKQKVHLLTLLE---TGMQLRASADKVKKDPFEN-FIAG 117
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Match: A0A7S2XV13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV13_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.410e-25 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 40 PAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFKKNANVRDPRVVDMLISKGYMELEETLLQFKQKTHLMRILEPHQTESPLRSKREGFLNQFYAG 339
P +QLYR+I+KELPRV+ IYD+D A A+ F+K+A+V+D RV+D+L++KGYM +EE +Q+KQKTHLM IL+P + + E F +FY G
Sbjct: 19 PVLQLYRKILKELPRVMIIYDVDMPKEEANAAIAYHFRKSAHVKDERVIDLLVAKGYMHVEEATMQYKQKTHLMSILDPWELSEKFKEP-ETFEEKFYKG 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7850.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7850.3.1 >prot_P-wetherbeei_contig7850.3.1 ID=prot_P-wetherbeei_contig7850.3.1|Name=mRNA_P-wetherbeei_contig7850.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp MKASKAARGSTSAPAVQLYRRIIKELPRVLHIYDMDTDLIVARTALYNAFback to top mRNA from alignment at P-wetherbeei_contig7850:1352..2340- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7850.3.1 ID=mRNA_P-wetherbeei_contig7850.3.1|Name=mRNA_P-wetherbeei_contig7850.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=989bp|location=Sequence derived from alignment at P-wetherbeei_contig7850:1352..2340- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7850:1352..2340- >mRNA_P-wetherbeei_contig7850.3.1 ID=mRNA_P-wetherbeei_contig7850.3.1|Name=mRNA_P-wetherbeei_contig7850.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig7850:1352..2340- (Phaeothamnion wetherbeei SAG_119_79)back to top |