mRNA_P-wetherbeei_contig7835.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: A0A6H5JPX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPX3_9PHAE) HSP 1 Score: 107 bits (267), Expect = 3.770e-25 Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLMLRA 264
LL+YDVT SSF GLE WRKHLE+NADPRCVS+V GNK D + V+ + G AYA++ MAF+ TSA+TG+N+E AF+ LAR +LRA
Sbjct: 83 LLVYDVTNRSSFVGLEAWRKHLEANADPRCVSIVAGNKSDV-SDQLVSPKDGEAYARQRGMAFISTSAKTGDNVEEAFVTLARNILRA 169
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: A0A835YTJ1_9STRA (GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ1_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 3.470e-19 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLML 258
LL+YDVT SSF LE+WRK+LE+NADP+CVSMV GNK D AA + AYA H+M FM TSA+T +N++ F E+AR ++
Sbjct: 82 LLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAAAR--AYADAHSMGFMMTSAKTAQNVDTLFEEVARRII 165
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: Q381R1_TRYB2 (Small GTPase, putative n=4 Tax=Trypanozoon TaxID=39700 RepID=Q381R1_TRYB2) HSP 1 Score: 84.3 bits (207), Expect = 3.110e-16 Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLM 255
LL+YDVT +FT L+ W + SNA+ V M++GNK D +V+ E+G A+A+KHN+ FMETSA+T +N++ AFL+ A ++
Sbjct: 84 LLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNKCDLEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMI 168
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: V5BBM5_TRYCR (Uncharacterized protein n=2 Tax=Trypanosoma cruzi TaxID=5693 RepID=V5BBM5_TRYCR) HSP 1 Score: 82.0 bits (201), Expect = 2.060e-15 Identity = 37/85 (43.53%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLM 255
LL+YDVT +FT L+ W + ++NA+ V M++GNK D A QV+ E+G ++A+K+N+ FMETSA+T +N++ AF++ A ++
Sbjct: 84 LLVYDVTRRETFTHLQTWLEDAKANANTAIVIMLIGNKCDLEAKRQVSREEGESFARKNNLVFMETSAKTAQNVDDAFMKTAMMI 168
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: A0A1X0NVM5_9TRYP (Ras-related protein rab-2a n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0NVM5_9TRYP) HSP 1 Score: 82.0 bits (201), Expect = 2.450e-15 Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLM 255
LL+YDVT +F L+ W + ++NA+ V M++GNK D A QV+ E+G A+AKK+N+ FMETSA+T +NI+ AFL+ A ++
Sbjct: 84 LLVYDVTRRETFAHLQTWIEDAKANANTAIVIMLIGNKCDLEAKRQVSREEGEAFAKKNNLFFMETSAKTAQNIDDAFLKTATVI 168
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: G0U939_TRYVY (Putative ras-related protein rab-2a n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0U939_TRYVY) HSP 1 Score: 81.3 bits (199), Expect = 4.310e-15 Identity = 37/87 (42.53%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLMLR 261
LL+YDVT +F L+ W + +NA+ V M++GNK D QV+ E+G ++A+KHN+ FMETSA+T +N++ AFL+ A ++ +
Sbjct: 84 LLVYDVTRRETFMHLQTWLEDARANANTTVVIMLIGNKCDLATKRQVSREEGESFAQKHNLVFMETSAKTAQNVDDAFLKTASMIYK 170
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: A0A061J7P0_TRYRA (Rab family, other n=4 Tax=Trypanosoma TaxID=5690 RepID=A0A061J7P0_TRYRA) HSP 1 Score: 80.9 bits (198), Expect = 5.560e-15 Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLM 255
LL+YDVT +FT L+ W + +NA+ V M++GNK D A QV+ E+G ++AK++N+ FMETSA+T +N++ AF+ A ++
Sbjct: 84 LLVYDVTRRETFTHLQTWLEDARANANNAIVIMLIGNKCDLEAKRQVSREEGESFAKRNNLVFMETSAKTAQNVDDAFMRTATMI 168
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: A0A836CB79_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB79_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.820e-14 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDA-PAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELARLMLRA 264
+L+YDVT+ +SF LE+WR L +NA P CV++V GNK D PA V+A+Q AYA+ +MAF TSA+T EN+ F ELAR M+ A
Sbjct: 114 VLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPA---VSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVAA 199
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: L8GSP6_ACACA (Ras-related protein Rab-2A, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSP6_ACACA) HSP 1 Score: 79.0 bits (193), Expect = 2.530e-14 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELAR 249
LL+YD+T +F L W + ++ V M++GNK D + QV+ E+GAA+AK+HN+ F+ETSA+T EN+E AF+ AR
Sbjct: 99 LLVYDITRRETFEHLTSWLEDCRKYSNSNIVIMLIGNKCDLESKRQVSKEEGAAFAKEHNLLFLETSAKTAENVEQAFINTAR 181
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Match: E2GMZ1_EUPOC (Rab GTPase 2d n=2 Tax=Euplotidae TaxID=100127 RepID=E2GMZ1_EUPOC) HSP 1 Score: 78.6 bits (192), Expect = 4.840e-14 Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 1 LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEQGAAYAKKHNMAFMETSARTGENIEAAFLELAR 249
LL+YDVT+ SF L+ W + ++ NA + ++++GNK+D QV+ E+G A+AKKH++ F ETSA++ N+E AFL + +
Sbjct: 86 LLVYDVTKRQSFENLQKWLEEMKENAYSKMTTILIGNKIDLENERQVSYEEGQAFAKKHDLVFFETSAKSAHNVEKAFLAITQ 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7835.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7835.1.1 >prot_P-wetherbeei_contig7835.1.1 ID=prot_P-wetherbeei_contig7835.1.1|Name=mRNA_P-wetherbeei_contig7835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp LLIYDVTEPSSFTGLEVWRKHLESNADPRCVSMVVGNKVDAPAPHQVAAEback to top mRNA from alignment at P-wetherbeei_contig7835:1781..2965- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7835.1.1 ID=mRNA_P-wetherbeei_contig7835.1.1|Name=mRNA_P-wetherbeei_contig7835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig7835:1781..2965- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7835:1781..2965- >mRNA_P-wetherbeei_contig7835.1.1 ID=mRNA_P-wetherbeei_contig7835.1.1|Name=mRNA_P-wetherbeei_contig7835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig7835:1781..2965- (Phaeothamnion wetherbeei SAG_119_79)back to top |