mRNA_P-wetherbeei_contig12906.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A835YPQ1_9STRA (RuvB-like helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ1_9STRA) HSP 1 Score: 314 bits (805), Expect = 7.850e-103 Identity = 163/175 (93.14%), Postives = 172/175 (98.29%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQ +ARRAAG+VYKMI+EGHIAGRAILLAGKPGTGKTALAMGLAQALG DTPFTTIAGSEIFSLEMS+TEALTQAFRRSIGVKIMEETEIIEGEVVE+QVDTPAGGGDK+GR+TLCTTEMETVYDL AKMIDAL+KE+V Sbjct: 12 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQHAARRAAGIVYKMIQEGHIAGRAILLAGKPGTGKTALAMGLAQALGKDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVEVQVDTPAGGGDKTGRVTLCTTEMETVYDLGAKMIDALQKEKV 186
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: D8LJG0_ECTSI (RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJG0_ECTSI) HSP 1 Score: 308 bits (789), Expect = 3.860e-101 Identity = 159/175 (90.86%), Postives = 170/175 (97.14%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 EVRDLTRIERIGAHSHIRGLGLDD+LEPRDVSQGLVGQ +ARRA GV+YKMI+EG IAGRAILLAGKPGTGKTA+AMGLAQALGPDTPFTTIAGSEIFSLEMS+TEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTP GGGDK+GR+TLCTTEMETVYDL AKMI+AL+KE+V Sbjct: 12 EVRDLTRIERIGAHSHIRGLGLDDSLEPRDVSQGLVGQHAARRATGVIYKMIQEGQIAGRAILLAGKPGTGKTAIAMGLAQALGPDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPVGGGDKTGRVTLCTTEMETVYDLGAKMIEALQKEKV 186
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: W7TAI8_9STRA (RuvB-like helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAI8_9STRA) HSP 1 Score: 293 bits (750), Expect = 3.500e-95 Identity = 152/173 (87.86%), Postives = 166/173 (95.95%), Query Frame = 1 Query: 7 RDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 +DLTRIERIGAHSHIRGLGLDDALEPR+VSQG+VGQ ARRAAG+VYKMIKEG IAGRAILLAG+PGTGKTA+AMGLAQALG TPFTTIAGSEIFSLEMS+TEA+TQAFRRSIGV+IMEETEIIEGEVVE+QVDTPAGGG K+GRITLCTTEMETVYDL AKMI+AL+KE+V Sbjct: 12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKV 184
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A7S1XS31_9STRA (RuvB-like helicase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XS31_9STRA) HSP 1 Score: 290 bits (742), Expect = 4.240e-95 Identity = 154/176 (87.50%), Postives = 166/176 (94.32%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPA-GGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 EVRDLTRIERIGAHSHIRGLGLDDALEPR+VSQG+VGQ ARRAAGVVYKMI+EG IAGRAILLAG+PGTGKTA+AMG+AQALG DTPF TIAGSEIFSLEMS+TEALTQAFRRSIGV+IMEETEIIEGEVVEIQVDTPA G +KSGRITLCTT+METVYDL KMIDAL+KE+V Sbjct: 105 EVRDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAPARRAAGVVYKMIQEGKIAGRAILLAGQPGTGKTAIAMGIAQALGEDTPFNTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPAEGASEKSGRITLCTTDMETVYDLGTKMIDALQKEKV 280
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A397F0B8_9STRA (RuvB-like helicase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F0B8_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.130e-92 Identity = 149/177 (84.18%), Postives = 164/177 (92.66%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGG-GDKSGRITLCTTEMETVYDLVAKMIDALEKERVE 528 EVRD+TRIERIGAHSHIRGLGLDDALEPR+VSQG+VGQ AR+AAG+V +MI+EG IAGRAILLAGKPGTGKTA+AMG+AQALG DTPFTTIAGSE+FSLEMS+TEALTQAFRRSIGV+IMEETEIIEGEVVEIQVDTP GG GDK GR+TL TTEMETVYDL AKMID L K ++E Sbjct: 5 EVRDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKGKIE 181
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A812WEQ8_SYMMI (RuvB-like helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WEQ8_SYMMI) HSP 1 Score: 285 bits (729), Expect = 2.060e-92 Identity = 148/171 (86.55%), Postives = 162/171 (94.74%), Query Frame = 1 Query: 13 LTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 +TR+ERIGAHSHIRGLGLDDA EPR+VSQG+VGQ SAR+A GVVY+MI+EG IAGRAILLAGKPGTGKTALAMGLAQALG DTPFTTIAGSEIFSLEMS+TEALTQAFRRSIGV+IMEETEIIEGEVVEIQVD P G G+K+GR+TLCTTEMETVYDL AKMIDAL+KE+V Sbjct: 1 MTRMERIGAHSHIRGLGLDDASEPREVSQGMVGQASARKACGVVYRMIQEGKIAGRAILLAGKPGTGKTALAMGLAQALGEDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDEPTGSGEKTGRLTLCTTEMETVYDLGAKMIDALQKEKV 171
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A024U2S4_9STRA (RuvB-like helicase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024U2S4_9STRA) HSP 1 Score: 284 bits (727), Expect = 8.400e-92 Identity = 150/177 (84.75%), Postives = 165/177 (93.22%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGG-GDKSGRITLCTTEMETVYDLVAKMIDALEKERVE 528 EVRD+TRIERIGAHSHIRGLGLDDALEPR+VSQG+VGQ AR+AAG+V +MI+EG IAGRAILLAGKPGTGKTA+AMG+AQALG DTPFTTIAGSE+FSLEMS+TEALTQAFRRSIGV+IMEETEIIEGEVVEIQVDTP GG GDK GR+TL TTEMETVYDL AKMID L KE++E Sbjct: 27 EVRDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKEKIE 203
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A6V1PUX3_HETAK (RuvB-like helicase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUX3_HETAK) HSP 1 Score: 283 bits (725), Expect = 1.880e-91 Identity = 149/175 (85.14%), Postives = 165/175 (94.29%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGGG-DKSGRITLCTTEMETVYDLVAKMIDALEKER 522 EVRDLTR+ERIGAHSHIRGLGLDDALEPR+VSQGLVGQ +AR+A GV++KMI+EG IAGRAILLAGKPG+GKTALAMGLAQALG DTPFTTIAGSEIFSLEMS+TEALTQAFRRSIGV+IMEETEIIEGEVVEIQ+D PA G +K+GR+TLCTTEMETVYDL KMIDAL+KE+ Sbjct: 10 EVRDLTRMERIGAHSHIRGLGLDDALEPREVSQGLVGQNTARKACGVIFKMIQEGKIAGRAILLAGKPGSGKTALAMGLAQALGADTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQIDEPAAGQTEKTGRLTLCTTEMETVYDLGQKMIDALQKEK 184
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A7S2C2S5_9STRA (RuvB-like helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2S5_9STRA) HSP 1 Score: 276 bits (706), Expect = 6.130e-91 Identity = 141/175 (80.57%), Postives = 164/175 (93.71%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPAGGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 EVRDLTRIERIGAHSHIRGLGLDDALEPRD SQG+VGQ++AR+AAG+V++MI+EG IAGRA+LLAGKPGTGKTA+AMG+AQALG DTPFTTIA SEI+SLEMS TEALTQAFRRSIGV+I+EET++IEGEVVEIQVD+ G DK+GRITLCTTEMETVYDL +MI++L+KE+V Sbjct: 23 EVRDLTRIERIGAHSHIRGLGLDDALEPRDTSQGMVGQKTARKAAGIVFRMIQEGRIAGRAVLLAGKPGTGKTAIAMGIAQALGEDTPFTTIAASEIYSLEMSTTEALTQAFRRSIGVRIVEETDMIEGEVVEIQVDSDVTGTDKTGRITLCTTEMETVYDLGPQMIESLQKEKV 197
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Match: A0A7R9YE57_9STRA (RuvB-like helicase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE57_9STRA) HSP 1 Score: 282 bits (722), Expect = 6.830e-91 Identity = 149/176 (84.66%), Postives = 165/176 (93.75%), Query Frame = 1 Query: 1 EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKMIKEGHIAGRAILLAGKPGTGKTALAMGLAQALGPDTPFTTIAGSEIFSLEMSRTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPA-GGGDKSGRITLCTTEMETVYDLVAKMIDALEKERV 525 EVRDLTRIERIGAHSHIRGLGLDDALEPR+VSQG+VGQ ARRAAGVV+KMI+EG IAGRAILLAG+PG+GKTA+AMG+AQALG DTPF TIAGSEIFSLEMS+TEALTQAFRRSIGV+IMEETEIIEGEVVEIQVDTP G +K GRITLCTT+METVYDL +KMID+L+KE+V Sbjct: 13 EVRDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQGPARRAAGVVFKMIQEGKIAGRAILLAGQPGSGKTAIAMGIAQALGEDTPFNTIAGSEIFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPVDGSAEKRGRITLCTTDMETVYDLGSKMIDSLQKEKV 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12906.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12906.1.1 >prot_P-wetherbeei_contig12906.1.1 ID=prot_P-wetherbeei_contig12906.1.1|Name=mRNA_P-wetherbeei_contig12906.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp EVRDLTRIERIGAHSHIRGLGLDDALEPRDVSQGLVGQQSARRAAGVVYKback to top mRNA from alignment at P-wetherbeei_contig12906:40..1144- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12906.1.1 ID=mRNA_P-wetherbeei_contig12906.1.1|Name=mRNA_P-wetherbeei_contig12906.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1105bp|location=Sequence derived from alignment at P-wetherbeei_contig12906:40..1144- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12906:40..1144- >mRNA_P-wetherbeei_contig12906.1.1 ID=mRNA_P-wetherbeei_contig12906.1.1|Name=mRNA_P-wetherbeei_contig12906.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig12906:40..1144- (Phaeothamnion wetherbeei SAG_119_79)back to top |