mRNA_P-wetherbeei_contig783.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: A0A835YW45_9STRA (Mitochondrial inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW45_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.620e-18 Identity = 76/219 (34.70%), Postives = 116/219 (52.97%), Query Frame = 1
Query: 1099 EAAHLRMQQLERVADGQRVSSAALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETS-------------RKFIDLLARHQSEAQQKLSSALREQAERLKGELRKDYEAAAQAVMAAQKEKLEEERRLELEAQEAALREQYQQQATADVTAILTKTAEASEARAAELTELAAAVGAVADAWDSTADVERASAKVHRMT 1716
E LR+ L + + + AALRKELE +L D+D+LDE+ LRY++VQLAAEMQ RTKWE R+ +SL+ +EE S R+++ L+ + E++ KL L +Q E+++ E+ ++Y+ Q + Q + EE L QEA L E + Q ++ + + L + V AV AWDS A ++ ASA HR+T
Sbjct: 278 EVRRLRLDALRQAEEEVMEAGAALRKELEATVLADIDKLDEQALRYKVVQLAAEMQNRTKWEALRLQQSLKATEEEASILQALYFTSLIASRRYLSLVRQQAEESEAKLKQELADQEEQMRAEILQEYQGKLQEHIVKQAQGYEELAAKRLRDQEAQLSETFSAQVAEQLSKVEQEAXXXXXXXXXXXXXLRSQVQAVRSAWDSVAALDAASAAAHRLT 496
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: D7FKC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC6_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 2.000e-13 Identity = 86/253 (33.99%), Postives = 128/253 (50.59%), Query Frame = 1
Query: 1000 EDAEVDVEEVLVVAEEMPLPS----LPAKSPRDA-----IEEEAAHLRMQQLERVADGQRVSSAALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETSRKFIDLLARHQSEAQQKLSSALREQAERLKGELRKDYEAAAQAVMAAQKEKLEEERRLELEAQEAALREQYQQQATADVTAILTKTAEASEARAAELTELAAAVGAV---ADAWDSTADVER-ASAKVHRMTH 1719
E AEV EEV E + PS L K RDA ++ + +R + L VA+ V+SA L++ELE +LKDL +LDE LR+R+ QLA E+QERTKWE R+ + ++ + E S K+ LL+ + ALREQ + L E + Y A + + Q + E A AL ++ +++ V + + + SE AEL EL+ + +A + + ER AS KVHR+TH
Sbjct: 182 EHAEVSGEEVGEGEEGLASPSTLAALQEKERRDAEAREELDGKKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISDKYEALLSEQKERYDGATGRALREQEKELSAEFVEKYGAELRVHLEHQANEFTEALHANAVAGREALEQELERRHADVVAELKAQDLDRSEKVVAELRELSNKAESKIMEVEAARNAEEAERLASEKVHRVTH 434
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: A0A6H5L3V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V0_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.650e-13 Identity = 86/253 (33.99%), Postives = 129/253 (50.99%), Query Frame = 1
Query: 1000 EDAEVDVEEVLVVAEEMPLPS----LPAKSPRDAIEEEAA-----HLRMQQLERVADGQRVSSAALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETSRKFIDLLARHQSEAQQKLSSALREQAERLKGELRKDYEAAAQAVMAAQKEKLEEERRLELEAQEAALREQYQQQATADVTAILTKTAEASEARAAELTELAAAVGAV---ADAWDSTADVER-ASAKVHRMTH 1719
E AEV EEV E + PS L K RDA E +R + L VA+ V+SA L++ELE +LKDL +LDE LR+R+ QLA E+QERTKWE R+ + ++ + E S K+ LL+ + + + ALREQ + L + + Y A + + Q + +E A AL ++ +++ V + + + SE AEL EL+ + +A + + ER AS KVHR+TH
Sbjct: 417 EHAEVSGEEVGEGEEGLASPSALAALQEKERRDAEAREELDGTKRRIRNEALSSVAEEMEVASAGLKRELEQSMLKDLKDLDEDSLRFRVAQLATELQERTKWEALRLMDGVQKKEAEISDKYEALLSEQKERYDGETARALREQEKELSAQFVEKYGAELRVHLEHQANEFKEALHANAVAGREALEQELERRHADVVAELKAQDLDRSEKVVAELRELSHKAESKIMEVEAARNAEEAERLASEKVHRVTH 669
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: A0A7S3XVG6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVG6_HETAK) HSP 1 Score: 74.7 bits (182), Expect = 1.160e-12 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 1126 LERVADGQRVSSAALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETS 1332
+ER A SAALR ELE GLL+DL+ LDE GLRYRI QLAAE+QERTKWE R++E L+ A E +
Sbjct: 8 VERAAAAAAAESAALRLELEQGLLRDLEGLDEAGLRYRITQLAAELQERTKWEALRLHEGLKRAAAEAA 76
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: A0A7S1ZXV1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZXV1_TRICV) HSP 1 Score: 61.2 bits (147), Expect = 9.100e-7 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 1150 RVSSAALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETSRKFIDLLARHQSEAQQKLSSALREQAERLKGELRKDYEAAAQAV 1464
R + A+R L+ L DLD L LR R+VQLA+EM+ERTKWE R+ E L ++ET+ K++++L + + E + L+ LREQ + L + +A A+
Sbjct: 69 RAARRAVRANLDESYLSDLDALSPGELRIRVVQLASEMEERTKWEAVRLKEFLSMKEKETADKYLEVLQKQRLEFEDLLARRLREQEDALTRQANAALQAKENAI 173
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: B8LD99_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD99_THAPS) HSP 1 Score: 62.4 bits (150), Expect = 1.680e-6 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 1162 AALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETSRKFIDLLARHQSEAQQKLSSALREQ 1407
AALR +++ KDLD+L E LR R+VQLA EM +RTKWE R+ E L ++E K++++L + + E + L+ LREQ
Sbjct: 279 AALRSDMDEEYFKDLDQLTENELRVRVVQLATEMSDRTKWEAVRLKEFLTMKEKEVGEKYLEILQKQRLEFEALLAQKLREQ 360
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Match: A0A7S2LAJ0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LAJ0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.260e-5 Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 1156 SSAALRKELELGLLKDLDELDEKGLRYRIVQLAAEMQERTKWEGFRMYESLRHAQEETSRKFIDLLARHQSEAQQKLSSALREQ 1407
++AALR +L+ DLD L LR R+VQLA EM +RTKWE R+ E L ++E ++ +L + + E + L+ LREQ
Sbjct: 19 ANAALRSDLDREYFTDLDSLTASELRTRVVQLATEMSDRTKWEAVRLKEFLAMKEKEVGDNYLTILQKQRLEFEALLAQKLREQ 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig783.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig783.2.2 >prot_P-wetherbeei_contig783.2.2 ID=prot_P-wetherbeei_contig783.2.2|Name=mRNA_P-wetherbeei_contig783.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=573bp EVRKLPPSSPLFTGIVAPAPSSLSIPMIAARSSICAVRRARAASGGLQHGback to top mRNA from alignment at P-wetherbeei_contig783:2671..5759+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig783.2.2 ID=mRNA_P-wetherbeei_contig783.2.2|Name=mRNA_P-wetherbeei_contig783.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3089bp|location=Sequence derived from alignment at P-wetherbeei_contig783:2671..5759+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig783:2671..5759+ >mRNA_P-wetherbeei_contig783.2.2 ID=mRNA_P-wetherbeei_contig783.2.2|Name=mRNA_P-wetherbeei_contig783.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1719bp|location=Sequence derived from alignment at P-wetherbeei_contig783:2671..5759+ (Phaeothamnion wetherbeei SAG_119_79)back to top |