mRNA_P-wetherbeei_contig7825.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 3.000e-12 Identity = 30/60 (50.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 13 SNRGFTQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
+ RGF++R T+ L YF PIEE +K +GVSTTI+KR+CR+ IK+WP+R++ SV + +
Sbjct: 98 AKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI 157
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: Q1KUV6_9ROSI (RWP-RK domain-containing protein n=1 Tax=Tarenaya spinosa TaxID=228870 RepID=Q1KUV6_9ROSI) HSP 1 Score: 63.9 bits (154), Expect = 7.050e-12 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 RPGTSNRGFTQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
R G R T R T+ + YF LP+EEAA+ + V T+VK++CRR + +WPHRK+ S++RK+
Sbjct: 10 RRGEEQRERTGRLTLKDIGKYFHLPVEEAARIMKVCPTVVKKICRRGGLARWPHRKIRSIERKI 73
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 7.690e-12 Identity = 29/60 (48.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 13 SNRGFTQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
+ RGF++R T+ L YF PIE+ +K +GVSTTI+KR+CR+ IK+WP+R++ SV + +
Sbjct: 100 AKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI 159
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: A0A835YUV9_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV9_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.370e-11 Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 49 TLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQR 186
TL F P+ EAAK LGVSTTIVKR+CRR I+KWP R LV VQR
Sbjct: 8 TLESLFNRPVTEAAKELGVSTTIVKRLCRRYGIQKWPFRSLVRVQR 53
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: R4WEQ7_9CHLO (Minus dominance protein n=1 Tax=Gonium viridistellatum TaxID=51704 RepID=R4WEQ7_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 7.520e-11 Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 40 TVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSV 180
T + LS YF LPI+EA+KSLG+STT +KR+CR+L I +WP+RK+ S+
Sbjct: 114 TSADLSSYFHLPIKEASKSLGISTTYLKRICRQLGIPRWPYRKVASL 160
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: A0A6J1CQA6_MOMCH (protein RKD1-like n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CQA6_MOMCH) HSP 1 Score: 62.0 bits (149), Expect = 8.820e-11 Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 34 RATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
R TV+ L DY LPI EAAK + + T+VK++CRR +++WP+RK+ S QRK+
Sbjct: 31 RMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKM 83
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: R4WLR8_9CHLO (Minus dominance protein n=1 Tax=Gonium multicoccum TaxID=47784 RepID=R4WLR8_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 1.060e-10 Identity = 27/48 (56.25%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 40 TVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQ 183
T + +S+YF LPI+EA+KSLG+STT +KR+CR+L I +WP+RK+ S++
Sbjct: 114 TSADISNYFHLPIKEASKSLGISTTYLKRLCRQLGIPRWPYRKVASLE 161
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: A0A2I0JPT7_PUNGR (RWP-RK domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JPT7_PUNGR) HSP 1 Score: 64.7 bits (156), Expect = 1.110e-10 Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 7 GTSNRGFTQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
G R T R T+ L+ YF LP+E AA+ L + T+VKR+CRR +K+WPHRK+ S++R++
Sbjct: 241 GLEQRERTGRLTLRDLAGYFHLPVEAAARKLNLCPTVVKRICRRGGLKRWPHRKIKSIERQI 302
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: UPI000B8D1640 (uncharacterized protein LOC110809275 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D1640) HSP 1 Score: 64.7 bits (156), Expect = 1.210e-10 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 13 SNRGFTQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
+ R T + T+ + YF LPIEEAAK + + T++KR+CRR + +WPHRK+ S++RK+
Sbjct: 275 AQRERTGKLTIKDVGPYFHLPIEEAAKKMNLCPTVMKRICRRAGLSRWPHRKIKSIERKI 334
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Match: A0A1U8LRZ5_GOSHI (protein RKD1-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8LRZ5_GOSHI) HSP 1 Score: 61.2 bits (147), Expect = 1.310e-10 Identity = 24/55 (43.64%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 28 TQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKKWPHRKLVSVQRKL 192
T+ T+ + +YF LPIE+AAK + S T+VK++CR+ + +WPHRK+ S+++K+
Sbjct: 13 TRNLTLKEIENYFHLPIEKAAKKMEFSATVVKKICRKYGLSRWPHRKIQSMEKKI 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7825.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7825.2.1 >prot_P-wetherbeei_contig7825.2.1 ID=prot_P-wetherbeei_contig7825.2.1|Name=mRNA_P-wetherbeei_contig7825.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp RPGTSNRGFTQRATVSTLSDYFALPIEEAAKSLGVSTTIVKRVCRRLNIKback to top mRNA from alignment at P-wetherbeei_contig7825:1967..2158+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7825.2.1 ID=mRNA_P-wetherbeei_contig7825.2.1|Name=mRNA_P-wetherbeei_contig7825.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig7825:1967..2158+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7825:1967..2158+ >mRNA_P-wetherbeei_contig7825.2.1 ID=mRNA_P-wetherbeei_contig7825.2.1|Name=mRNA_P-wetherbeei_contig7825.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig7825:1967..2158+ (Phaeothamnion wetherbeei SAG_119_79)back to top |