mRNA_P-wetherbeei_contig782.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig782.3.3
Unique NamemRNA_P-wetherbeei_contig782.3.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A835Z523_9STRA (Pyrroline-5-carboxylate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z523_9STRA)

HSP 1 Score: 327 bits (839), Expect = 2.110e-108
Identity = 182/275 (66.18%), Postives = 215/275 (78.18%), Query Frame = 3
Query:  222 MSGECLQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELR 1046
            M  E L +GFIGAGMMASA++ G+I+A  A+P  ++ SD  Q +LDR    G+    +N EVVSR+R V LAVKPDV+ SVLDEIK      D   + HL+VSIAAG+ L ++EGRL +GARVVRVMPNTPCLVSESAAAFA GTHAT  DR LV+ ++ +VG + EVKE QLDAVTGLSGSGPAYV++ IEALADGGVRMGLPR VALQLAAQTVKGAA MV+ TG HPG LKD V SPGGTTIAG+EALE+ G R AAM AV +AT+RS+EL+
Sbjct:    1 MMDENLSIGFIGAGMMASALIKGVIKAGKAKPASITASDAYQPSLDRQAAEGVHTTLSNREVVSRSRVVFLAVKPDVVASVLDEIKD-----DVDPDRHLIVSIAAGISLESMEGRLNSGARVVRVMPNTPCLVSESAAAFALGTHATAEDRALVQELMGSVGYACEVKESQLDAVTGLSGSGPAYVYLLIEALADGGVRMGLPRQVALQLAAQTVKGAATMVMTTGQHPGQLKDAVTSPGGTTIAGIEALEKAGFRGAAMGAVVAATQRSQELK 270          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: D7G6J4_ECTSI (Pyrroline-5-carboxylate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6J4_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 1.600e-102
Identity = 174/269 (64.68%), Postives = 213/269 (79.18%), Query Frame = 3
Query:  240 QLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELR 1046
            +LGFIGAGMM+SAM++GII AKV  P ++  SDV Q +LDR   +G+    TN EVV+ A  ++LAVKPDV+ +VL EI+        LT++ L+VSIAAGVPLSA+E  L  G RV+RVMPNTPCLVSESAAAF+ G+HA + DR+LV+ +L +VG + EVKE QLDAVTG+SGSGPAY+F+ IEALADGGVRMGLPR  AL+LAAQTVKGAA MVLETG HPG+LKD VCSPGGTTI  VEALE+ G RAAA++AV +AT +S E+R
Sbjct:   14 KLGFIGAGMMSSAMINGIIAAKVTEPGNIIASDVYQPSLDRLSASGVRTSTTNKEVVTGADVIVLAVKPDVIPAVLTEIE------QFLTDDSLVVSIAAGVPLSALEN-LVPGKRVIRVMPNTPCLVSESAAAFSLGSHAKDEDRELVQSLLSSVGFACEVKESQLDAVTGVSGSGPAYIFVLIEALADGGVRMGLPRATALKLAAQTVKGAATMVLETGTHPGVLKDNVCSPGGTTICAVEALEKNGFRAAAISAVVAATNKSLEMR 275          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A7S2WQB4_9STRA (Pyrroline-5-carboxylate reductase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WQB4_9STRA)

HSP 1 Score: 271 bits (692), Expect = 5.930e-86
Identity = 159/275 (57.82%), Postives = 198/275 (72.00%), Query Frame = 3
Query:  222 MSGECLQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGIAACATNAEVVSRAR-TVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEEL 1043
            +S E +++GFIG+GMMASA++ G++   V  P+ +S SDV +       E G  A A N EV  R+   VILAVKP+++    +++ A          + L++SIAAGV L  +E  L  G RVVRVMPNTPCLV E+A  FA G+ A + DR LVK++ DAVG ++EV E  LDAVTGLSGSGPAYVFMFIEAL+DGGVR GLPR VA QLAAQTVKGAA MVL+TG HPG+LKD V SPGGTTIAGVEALE+ GLR AA++AV +AT+RS +L
Sbjct:   16 LSSEMMKVGFIGSGMMASALMDGLVSKNVTTPDMISCSDVWEPARKTASEKGFYATAANKEVCERSSDAVILAVKPNIVGQACEDLAAT-------QSDFLVISIAAGVTLGTLEAAL-PGRRVVRVMPNTPCLVGEAACGFALGSLANDADRSLVKKIFDAVGIAMEVNESLLDAVTGLSGSGPAYVFMFIEALSDGGVRAGLPRDVATQLAAQTVKGAAEMVLKTGKHPGLLKDGVTSPGGTTIAGVEALEQGGLRPAAISAVKAATKRSMQL 282          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: D7FWF9_ECTSI (Pyrroline-5-carboxylate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF9_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.450e-85
Identity = 152/273 (55.68%), Postives = 202/273 (73.99%), Query Frame = 3
Query:  228 GECLQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELR 1046
            G+  +LGF+GAGMMA+AMV+GI+ +KV  P+++ +S   +++LDR  + G+     N EV S +  V++AVKPDV+ +VL EI         L ++ L+VSIAAG+PL+ +E +L  G RVVRVMPNTPCLVSE A  F+ G+ AT+ DR  V  ++ AVG +VEVKE  LD +TG+SGSGPAY+++ IEALADGGVRMGLPR +A++LAAQTVKGAA MVLETG HP +LKD VCSPGG TIA +E+LE+ G R+AAM AV +   +S E+R
Sbjct:   61 GDGPRLGFVGAGMMATAMVNGIVASKVTEPDNVFVSAPHRSSLDRFAKLGVRTSDINLEVASGSDVVVVAVKPDVVPAVLREIAPH------LRKDALVVSIAAGIPLAVLE-QLAPGKRVVRVMPNTPCLVSEGATGFSMGSLATDEDRDTVHALMGAVGLAVEVKEALLDGLTGVSGSGPAYIYVLIEALADGGVRMGLPRAMAIRLAAQTVKGAAEMVLETGEHPAVLKDNVCSPGGLTIAAIESLEKNGFRSAAMQAVIAVASKSIEMR 326          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A518I688_9PLAN (Pyrroline-5-carboxylate reductase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I688_9PLAN)

HSP 1 Score: 268 bits (685), Expect = 3.300e-85
Identity = 155/270 (57.41%), Postives = 194/270 (71.85%), Query Frame = 3
Query:  243 LGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRH-RETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELRK 1049
            +GFIGAG MA+A+ +G+I +     + +S SD  +A  D   RETG  A  +N  VV ++  ++L+VKP  +  VL+EIK      ++LT++ LLVSIAAG PLS    +LG   R++RVMPNTPCLV + A+AFA G  A+E D  LV+ +L  VGT+VEV E QLDAVTGLSGSGPAY++  IEAL+DGGVRMGLPR +A QLAAQTVKGAA MVLETG HPG LKD V SPGGTTIAG+ ALE  GLR + + AV++AT RS EL K
Sbjct:    9 VGFIGAGRMATALAAGLISSGFTSADHVSASDTYEAARDSFTRETGAQAVESNLTVVEQSEIIVLSVKPQHVAEVLEEIK------ETLTDQQLLVSIAAGCPLSLFVEKLGKTKRLIRVMPNTPCLVKQGASAFARGGQASETDASLVESLLSTVGTAVEVPEAQLDAVTGLSGSGPAYIYQIIEALSDGGVRMGLPRHIATQLAAQTVKGAAEMVLETGEHPGALKDAVTSPGGTTIAGIHALEAGGLRNSLINAVSAATNRSIELGK 272          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A6H5JW87_9PHAE (Pyrroline-5-carboxylate reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW87_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 1.370e-84
Identity = 153/273 (56.04%), Postives = 200/273 (73.26%), Query Frame = 3
Query:  228 GECLQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELR 1046
            G+   LGF+GAGMMA+AMV+GI+ +KV  P ++ +S   +++LDR  + GI     N EV S +  V++AVKPDV+ +VL EI         L ++ L+VSIAAG+PL+ +E +L  G RVVRVMPNTPCLVSE A  F+ G+ AT+ DR  V  ++ AVG +VEVKE  LD +TG+SGSGPAY+++ IEALADGGVRMGLPR +A++LAAQTVKGAA MVLETG HP +LKD VCSPGG TIA +E+LE+ G R+AAM AV +   +S E+R
Sbjct:  100 GDAPTLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGIRTSDINVEVASGSDVVVVAVKPDVVPAVLREIAPH------LRKDALVVSIAAGIPLAVLE-QLAPGKRVVRVMPNTPCLVSEGATGFSMGSLATDEDRDTVHALMGAVGLAVEVKEALLDGLTGVSGSGPAYIYVLIEALADGGVRMGLPRAMAIKLAAQTVKGAAEMVLETGEHPAVLKDNVCSPGGLTIAAIESLEKNGFRSAAMQAVITVASKSIEMR 365          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A517WTG7_9PLAN (Pyrroline-5-carboxylate reductase n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTG7_9PLAN)

HSP 1 Score: 266 bits (681), Expect = 1.370e-84
Identity = 154/273 (56.41%), Postives = 190/273 (69.60%), Query Frame = 3
Query:  234 CLQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRH-RETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELRK 1049
            C+++GFIGAG MA+A+  G+I +     E +  SD  +  L    +ETG  A  +N  VV +A  +ILAVKP  ++ V+ EI+        L  +HL+VSIAAG PLS     LG G R++RVMPNTPC+V + A+AF+ G  AT+ D  LV+ +L  VGT+VEV E QLDAVTGLSGSGPAYV+  IEAL+DGGVRMGLPR +A QLAAQTVKGAA MVLETG HPG LKD V SPGGTTIAG+  LE  GLR   M+AV++AT RS EL K
Sbjct:    6 CVKVGFIGAGRMATALAGGLISSGFTTAEHVLASDKFETALTGFAQETGAQAVESNLTVVQQAEVIILAVKPQQMIDVVQEIEGA------LNTQHLIVSIAAGCPLSFFLDELGKGVRMIRVMPNTPCMVQQGASAFSRGGQATDEDACLVESLLSTVGTAVEVPESQLDAVTGLSGSGPAYVYQVIEALSDGGVRMGLPRHIATQLAAQTVKGAAEMVLETGEHPGTLKDAVTSPGGTTIAGIHELEAGGLRHTLMSAVSAATNRSIELGK 272          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A7S3BCN7_9EUKA (Pyrroline-5-carboxylate reductase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BCN7_9EUKA)

HSP 1 Score: 266 bits (680), Expect = 2.070e-84
Identity = 150/271 (55.35%), Postives = 189/271 (69.74%), Query Frame = 3
Query:  243 LGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEELRKGA 1055
            +GF+G GMMAS+++ G +++       MS+++ V    ++H   G+   A N EV  RA  + LAVKPDV+  VL +I +      ++ +  L+VSIAAGV L A++ +L  GARV+RVMPN PCLV E AA F  G HAT  D +LV  +L  VG + EV EK +DAVTGLSGSGPAY F+ +EA+AD GVRMGLPRP+A  LAAQT++GAA MVL  G HPG LKD VCSPGGTTIAGVEALE +G RAAA+AAV +AT RS ELR  A
Sbjct:    6 VGFLGGGMMASSLIGGFLKSGAVAQAAMSVAEPVPPLREKHAAAGLFTSADNLEVARRADVIFLAVKPDVIPDVLRQIAS------TVGQAKLIVSIAAGVSLQALQAQLQPGARVIRVMPNLPCLVGECAAGFCRGAHATAADSKLVGGLLGTVGRAEEVPEKLMDAVTGLSGSGPAYGFLMVEAMADAGVRMGLPRPIATTLAAQTLRGAATMVLAGGKHPGELKDMVCSPGGTTIAGVEALEYRGFRAAAIAAVVAATTRSAELRAAA 270          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: A0A142YEH6_9PLAN (Pyrroline-5-carboxylate reductase n=2 Tax=Planctomyces sp. SH-PL62 TaxID=1636152 RepID=A0A142YEH6_9PLAN)

HSP 1 Score: 266 bits (680), Expect = 2.600e-84
Identity = 156/270 (57.78%), Postives = 190/270 (70.37%), Query Frame = 3
Query:  237 LQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDR-HRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEEL 1043
            L+ GF+GAG MASA+V G+IRA VA P+ ++ SD + A  +   RE GIA   +N  V+  +  V+LAVKP  +  VL EI         L   HL+VSIAAGVP++A+   LG   R+VRVMPNTP L+ E A+AFA G +AT+ D   V+R LD+VG +V V E QLDAVTGLSGSGPA+V+M IEAL+DGGVR GLPR VA  LAAQTV GAA MVLET  HPG LKDQV SPGGTTIAGV+ LE + LR A + AV +A+RRS EL
Sbjct:   15 LRWGFLGAGRMASALVKGMIRAGVATPDRIAASDPIPAAREELGREAGIAVHGSNRPVLDASDVVVLAVKPQSMAGVLAEIAPA------LAPRHLVVSIAAGVPIAAMSAALGAATRIVRVMPNTPALLGEGASAFALGANATDADADAVQRFLDSVGRAVRVPESQLDAVTGLSGSGPAFVYMIIEALSDGGVRAGLPRDVATTLAAQTVLGAARMVLETKIHPGALKDQVTSPGGTTIAGVQVLERQALRGALIDAVEAASRRSAEL 278          
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Match: UPI0013ED6CFA (pyrroline-5-carboxylate reductase n=1 Tax=Paludisphaera soli TaxID=2712865 RepID=UPI0013ED6CFA)

HSP 1 Score: 265 bits (678), Expect = 5.380e-84
Identity = 156/270 (57.78%), Postives = 190/270 (70.37%), Query Frame = 3
Query:  237 LQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDR-HRETGIAACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVSIAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQLVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGLPRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEEKGLRAAAMAAVTSATRRSEEL 1043
            L+ GF+GAG MASA+V G+IRA VA P+ ++ SD + A  D   RE GI+   TN  V+  A  ++LAVKP  + +VL EI         L   HL+VSIAAGV +  +   LG  AR+VRVMPNTP L+ E A+AFA G +AT+ D + V R+LD+VG +V V E QLDAVTGLSGSGPA+V+M IEAL+DGGVR GLPR VA  LAAQTV GAA MVLET  HPG LKDQV SPGGTTIAGV+ LE + LR A + AV +A+RRS EL
Sbjct:   16 LRWGFLGAGRMASALVKGMIRAGVATPDRIAASDPISAARDELGREAGISVHPTNRPVLDSADVIVLAVKPQSMAAVLAEIAPA------LAPRHLIVSIAAGVSIVTMADALGASARIVRVMPNTPALLGEGASAFALGPNATDADAEAVHRLLDSVGRAVRVPESQLDAVTGLSGSGPAFVYMIIEALSDGGVRAGLPRDVATTLAAQTVLGAAKMVLETKLHPGALKDQVTSPGGTTIAGVQVLERRALRGALIDAVEAASRRSAEL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig782.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z523_9STRA2.110e-10866.18Pyrroline-5-carboxylate reductase n=1 Tax=Tribonem... [more]
D7G6J4_ECTSI1.600e-10264.68Pyrroline-5-carboxylate reductase n=2 Tax=Ectocarp... [more]
A0A7S2WQB4_9STRA5.930e-8657.82Pyrroline-5-carboxylate reductase n=1 Tax=Eucampia... [more]
D7FWF9_ECTSI1.450e-8555.68Pyrroline-5-carboxylate reductase n=1 Tax=Ectocarp... [more]
A0A518I688_9PLAN3.300e-8557.41Pyrroline-5-carboxylate reductase n=2 Tax=Gimesia ... [more]
A0A6H5JW87_9PHAE1.370e-8456.04Pyrroline-5-carboxylate reductase n=1 Tax=Ectocarp... [more]
A0A517WTG7_9PLAN1.370e-8456.41Pyrroline-5-carboxylate reductase n=3 Tax=Gimesia ... [more]
A0A7S3BCN7_9EUKA2.070e-8455.35Pyrroline-5-carboxylate reductase n=1 Tax=Haptolin... [more]
A0A142YEH6_9PLAN2.600e-8457.78Pyrroline-5-carboxylate reductase n=2 Tax=Planctom... [more]
UPI0013ED6CFA5.380e-8457.78pyrroline-5-carboxylate reductase n=1 Tax=Paludisp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig782contigP-wetherbeei_contig782:443..3318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWF9
Preferred nameP5CR
PFAMsF420_oxidored,P5CR_dimer
Model size1093
Max annot lvl2759|Eukaryota
KEGG rclassRC00054,RC00083
KEGG koko:K00286
KEGG ReactionR01248,R01251,R03291,R03293
KEGG Pathwayko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230
KEGG ModuleM00015
Hectar predicted targeting categorymitochondrion
Exons7
Evalue6.99e-87
EggNOG OGsCOG0345@1|root,KOG3124@2759|Eukaryota
EC1.5.1.2
Descriptionpyrroline-5-carboxylate reductase activity
Cds size981
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig782.3.3prot_P-wetherbeei_contig782.3.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig782 523..3286 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187002.6607654-UTR-P-wetherbeei_contig782:442..5221683187002.6607654-UTR-P-wetherbeei_contig782:442..522Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig782 443..522 +
1683187002.7621293-UTR-P-wetherbeei_contig782:3286..33181683187002.7621293-UTR-P-wetherbeei_contig782:3286..3318Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig782 3287..3318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187002.6835034-CDS-P-wetherbeei_contig782:522..6101683187002.6835034-CDS-P-wetherbeei_contig782:522..610Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 523..610 +
1683187002.6972136-CDS-P-wetherbeei_contig782:698..8351683187002.6972136-CDS-P-wetherbeei_contig782:698..835Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 699..835 +
1683187002.708508-CDS-P-wetherbeei_contig782:1090..12821683187002.708508-CDS-P-wetherbeei_contig782:1090..1282Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 1091..1282 +
1683187002.7195938-CDS-P-wetherbeei_contig782:1716..18701683187002.7195938-CDS-P-wetherbeei_contig782:1716..1870Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 1717..1870 +
1683187002.733729-CDS-P-wetherbeei_contig782:2110..22031683187002.733729-CDS-P-wetherbeei_contig782:2110..2203Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 2111..2203 +
1683187002.7432992-CDS-P-wetherbeei_contig782:2585..27701683187002.7432992-CDS-P-wetherbeei_contig782:2585..2770Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 2586..2770 +
1683187002.7536302-CDS-P-wetherbeei_contig782:3154..32861683187002.7536302-CDS-P-wetherbeei_contig782:3154..3286Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig782 3155..3286 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig782.3.3

>prot_P-wetherbeei_contig782.3.3 ID=prot_P-wetherbeei_contig782.3.3|Name=mRNA_P-wetherbeei_contig782.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp
MRTKGLICLISPSLLRSGSPAFRRRLPFSGNRGAAFAAASANRDREAMSG
ECLQLGFIGAGMMASAMVSGIIRAKVARPEDMSMSDVVQANLDRHRETGI
AACATNAEVVSRARTVILAVKPDVLLSVLDEIKAGFFFFDSLTEEHLLVS
IAAGVPLSAIEGRLGTGARVVRVMPNTPCLVSESAAAFAAGTHATEGDRQ
LVKRMLDAVGTSVEVKEKQLDAVTGLSGSGPAYVFMFIEALADGGVRMGL
PRPVALQLAAQTVKGAAAMVLETGAHPGILKDQVCSPGGTTIAGVEALEE
KGLRAAAMAAVTSATRRSEELRKGAN*
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mRNA from alignment at P-wetherbeei_contig782:443..3318+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig782.3.3 ID=mRNA_P-wetherbeei_contig782.3.3|Name=mRNA_P-wetherbeei_contig782.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2876bp|location=Sequence derived from alignment at P-wetherbeei_contig782:443..3318+ (Phaeothamnion wetherbeei SAG_119_79)
CGACTGCGCTTTCTGCTTCTTCTTTTGTGCATCCACAAGTGCTCTCCATC CGGGACGATGAAGAGAGAGAGCGCTAGCTGATGAGAACAAAGGGTTTGAT TTGCTTAATATCGCCCTCCTTACTCCGCTCAGGATCGCCCGCTTTTCGCC GCCGCCTTCCCTTTTCAGGCAAGAAATTCATCTTTTGTGGAGGCGACATG TTTCAACAGCTTGCGCTCTAACGCTCTACTGAACCACCCCAGCTGATTTT TTGCAGGAAATAGAGGAGCAGCATTCGCGGCAGCGTCCGCTAATCGGGAT AGAGAAGCCATGAGCGGCGAATGTTTGCAGCTAGGCTTCATTGGGGCAGG CATGATGGCCTCGGCCATGGTGTCTGGAATCATCAGAGCGAAGGTAAGTG AAAATATTTCGTCGTTGGAGCAGGAACACTCTTGCTGCCTTTGGCTGTCC CATGCAAAAGCAAGGTGGAACGAAAAGGACATGTCTTGTAGAGCGTTAAT GTCTATGATTCTTGTTCCAGAGGATCAGCGGCCAGCGTTGCAACGGCGAG CTTTGCATCTTATAGAGGACCCTTTGACGCCTGACGCTATATCTTATTGA GCCAGTCTTAAAAACTATGCCGCCTAGTTAAGCCCCCACCAAAAACAGGT GGCACGGCCGGAAGATATGTCCATGAGCGACGTGGTCCAGGCGAACCTTG ACCGCCACCGCGAGACGGGCATCGCCGCCTGCGCCACCAATGCCGAGGTG GTGTCACGGGCCCGCACCGTCATCCTCGCCGTCAAGCCGGACGTCCTCCT CTCCGTGCTCGACGAGATCAAGGCAGGCTTCTTTTTCTTTGTTCCTTAGC ACAGCGTCGTTGTAGCCGGGAAGGATTTATTTCCTTCCGTTTCTCCCAGC CGCCAGACAGGCAGCCAGTCCGAGCTCCACCCCACAGTTTTGCTATTGGA TGCCTGATAATTTAGTGTGGAATCAGTCTTCATGTTTTTATGAAAAATGT ACGCGTTTCAAAGTGCAGCAATGGTCTAGCGAGACAGACACCTACGCCCC GGTGGAGGAATTCCAATCGATGGCGCAGCCCAGCCGCAAAAGACCGGCAA TGGATTTGCAAGTAACATCACCAGCAAGCGCCTGTTTCCACTCTACTCAA CTGCTGCCCGTTCCTCCCTCCTCATTTCTGCCTGGCACCACGTCGCGGCG CCGCACTGCACTCCGCGTCACACTCTTCTCTGGACGACATTCCGGCGGTC GGTCGAACGGGCGGCTTGCGGCAGGACTCGCTGACGGAGGAGCACCTGCT GGTGTCGATCGCGGCCGGGGTGCCGCTGTCGGCCATCGAGGGGCGTCTCG GCACTGGGGCGCGCGTGGTGCGGGTCATGCCCAACACGCCTTGCCTCGTC TCCGAGAGCGCCGCCGCCTTCGCGGCCGGTAAGCGAGCGAGGGGAAAGGA GCAAGGAAGTGCTGAGGCGAAGGGACGACGGATGGCAGGCTTGTGAGGAA TACTTTGTTTAACGTTGGTTTGTAAATTCCATTTGCTTCTTCGCAACGGA CTTCATATGAAAAAGACCAATAGCTTGCTTGACCCGTCCGTCCTCGTTGT TCTCGGTTTTCGTGCGGCGTTACTTGTGCGGTGGTGGCATCTGCCGTGCG GTGACGGCGGCACTGCAGGGACGCATGCAACGGAGGGCGACCGGCAACTG GTGAAGCGGATGCTGGACGCCGTGGGAACCTCCGTCGAGGTCAAGGAGAA GCAGCTGGACGGTGAGCGAGCGAGCGAGCAGCCGTTACTGAAGAAGGGGC TGAGGGCTGCACGACTGATGCTGTTTAAGTGCTGGCCGAGACGCCGAGTG CCCTGGGACTGCTGCAATCGTGTTGACTGATGATCCCGGCATCTTGCCTC TTCTCGTGGAGACTTTCGCGTTTTCAGGGGAGGTTGAGATGGGCAGGCAA GCCTCGTCTCAGCCAATCTCGTCTCCAAGCAGTGCCTGAAGCCGGCCGCT GCAGTTTTTGCAGTCAATTGCATCTTCCATCCGTTCCCTGTCGCGTTCGG TCTTGCACCACGCCTCAAACGGTCCGCTGTTCCCGCCGCTACTTCTGCCA CTGTCATCCCCTGCACTGCGGCCGCCGCTGCCGCCACTACCAGCTGTAAC CGGACTAAGCGGTAGCGGTCCGGCCTACGTCTTCATGTTCATCGAGGCGC TTGCTGACGGCGGCGTGCGAATGGGGCTGCCACGCCCGGTGGCGCTGCAA CTGGCGGCGCAGACCGTCAAGGGGGCAGCCGCGATGGTGCTCGAAACAGG GGCCCACCCGGGGATCCTCAAGGATCAGGTGCGGCCAGTCGTAGGGGGAT CAGATGCATGTGAGAATCGACTTCGTTCATTGGTCCGAAAGGGGGCTTTG CAGGGAGTGCACTCTTTGTTGGTTCTTTTTGTTTTGGGGTTTTTTGGGGG GGGAGGGGGGTTCAACGCTGTTGGAAACGTTTGGTAAAGGCGAGCTGGGA TGCTTCCTTCTGAATGGTGAAGTATATCGTTGTTTTCGACCGTCGTCTTC TACTACGTGCAATAATGGTTGTCATGTCGCCTCCGAAGACCTAATTTCTT GTCTATCCCTTGCCACCTCCAATAGGAGAACAGAAGAAGTTCCCTACTGT CGGCTGGCTCTAAGAAAATTACAACGCTCCAACAACTATTGTGGTCGTCT TCGCCCTCACAGGTCTGCAGCCCTGGCGGGACAACGATTGCCGGCGTTGA GGCGTTGGAGGAAAAAGGTCTGCGCGCTGCGGCAATGGCGGCGGTCACGA GCGCGACGCGTCGTTCTGAAGAGCTGCGGAAGGGCGCAAACTAAGAGACA TGAATCAAAATCCGGATAACTGGTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig782:443..3318+

>mRNA_P-wetherbeei_contig782.3.3 ID=mRNA_P-wetherbeei_contig782.3.3|Name=mRNA_P-wetherbeei_contig782.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig782:443..3318+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGAACAAAGGGTTTGATTTGCTTAATATCGCCCTCCTTACTCCGCTC
AGGATCGCCCGCTTTTCGCCGCCGCCTTCCCTTTTCAGGAAATAGAGGAG
CAGCATTCGCGGCAGCGTCCGCTAATCGGGATAGAGAAGCCATGAGCGGC
GAATGTTTGCAGCTAGGCTTCATTGGGGCAGGCATGATGGCCTCGGCCAT
GGTGTCTGGAATCATCAGAGCGAAGGTGGCACGGCCGGAAGATATGTCCA
TGAGCGACGTGGTCCAGGCGAACCTTGACCGCCACCGCGAGACGGGCATC
GCCGCCTGCGCCACCAATGCCGAGGTGGTGTCACGGGCCCGCACCGTCAT
CCTCGCCGTCAAGCCGGACGTCCTCCTCTCCGTGCTCGACGAGATCAAGG
CAGGCTTCTTTTTCTTTGACTCGCTGACGGAGGAGCACCTGCTGGTGTCG
ATCGCGGCCGGGGTGCCGCTGTCGGCCATCGAGGGGCGTCTCGGCACTGG
GGCGCGCGTGGTGCGGGTCATGCCCAACACGCCTTGCCTCGTCTCCGAGA
GCGCCGCCGCCTTCGCGGCCGGGACGCATGCAACGGAGGGCGACCGGCAA
CTGGTGAAGCGGATGCTGGACGCCGTGGGAACCTCCGTCGAGGTCAAGGA
GAAGCAGCTGGACGCTGTAACCGGACTAAGCGGTAGCGGTCCGGCCTACG
TCTTCATGTTCATCGAGGCGCTTGCTGACGGCGGCGTGCGAATGGGGCTG
CCACGCCCGGTGGCGCTGCAACTGGCGGCGCAGACCGTCAAGGGGGCAGC
CGCGATGGTGCTCGAAACAGGGGCCCACCCGGGGATCCTCAAGGATCAGG
TCTGCAGCCCTGGCGGGACAACGATTGCCGGCGTTGAGGCGTTGGAGGAA
AAAGGTCTGCGCGCTGCGGCAATGGCGGCGGTCACGAGCGCGACGCGTCG
TTCTGAAGAGCTGCGGAAGGGCGCAAACTAA
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