mRNA_P-wetherbeei_contig7819.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A835Z5M1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M1_9STRA) HSP 1 Score: 250 bits (638), Expect = 9.670e-77 Identity = 133/283 (47.00%), Postives = 182/283 (64.31%), Query Frame = 1
Query: 145 LGFMLYFLREILLPFAVAVFLMYLLQPMVNXXXXXPRRWCDKCCHRRGEECCQSLWSITRSRLMTEESQNLRE---PDGLGFGGGAXXXXXXXGRRRIF-------------------MSCLDYPIIPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVAKTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGLI 927
+GFMLYFLR IL+PF +A+F M+LLQP+VN PRRWC+KC R GE CC+ + ++TRSR ++ S P GGA R ++C+DYPIIPRW+AV++A+ A+ ++VLGVIVYTS +LE F +YE+GA +A+ +KK + YS+DEDVVP++ R + PR LA ++++ +YV+IFL +LLISP RP+ S WG IDLHIRRYIRLKT+IC+ VG+S G ILW L++QL+WVFGL+
Sbjct: 1 MGFMLYFLRTILVPFFIAIFFMHLLQPVVNLLSRPPRRWCNKCTKRNGELCCEGMNTLTRSRRYSDISDGGTAHVTPAPAVLSGGATGFRPDVARHLRHRPHQLSVDLDDEALAPPPALTCMDYPIIPRWLAVIMALVLAVSLVIVLGVIVYTSVMNLETQFYRYEEGASNLAKLLKKYMALVDYSLDEDVVPWLFKTMRDLTPRVLAMVLSSVAYMIYVVIFLTFLLISPTRPIPSSAWGAIDLHIRRYIRLKTSICVSVGISTGAILWALNIQLSWVFGLV 283
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: D7FV72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV72_ECTSI) HSP 1 Score: 189 bits (479), Expect = 3.060e-53 Identity = 111/240 (46.25%), Postives = 143/240 (59.58%), Query Frame = 1
Query: 208 MYLLQPMVNXXXXXPRRWCDKCCHRRGEECCQSLWSITRSRLMTEESQNLREPDGLGFGGGAXXXXXXXGRRRIFMSCLDYPIIPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVAKTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGLI 927
MYLLQPMVN PRRWCDKC RRGE CC+ + +T+SR + L D L G G + P++PRW+AV+LAIS L A+ +G IVY S L+A+F KYE A+ MA I K L +Y YS++ED +PF + R VPR L ++++ V IFLVYLLISP +P+ S VWG IDL IRRYIRLKT + + V +LW L VQ+A+VFG+I
Sbjct: 1 MYLLQPMVNYLCKPPRRWCDKCVKRRGEICCEGCFRVTKSRTYSA----LSPEDILEMEEGPAEHYPPTG-----WGLFNKPVVPRWLAVILAISVVLTALATVGAIVYGSVLSLQANFGKYETEAERMASVIDKRLHKYNYSINEDFMPFAIGSLRERVPRLLKLILSSLEYFFLVAIFLVYLLISPVKPIKSSVWGIIDLQIRRYIRLKTMVGMLAATVVTTMLWVLGVQMAYVFGII 231
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A7R9YDP2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDP2_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.880e-42 Identity = 110/304 (36.18%), Postives = 153/304 (50.33%), Query Frame = 1
Query: 181 LPFAVAVFLMYLLQPMVNXXXXXPRRWCDKCCHRRGEECCQSL-----------------------WSITRSRLMTEESQNLREPDGLG------------FGGGAXXXXXXXGRRR--------IFMS------------CLDYPIIPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVAKTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGLI 927
+PF VA+ LMYLLQP+V+ PRRWCDKC RRGE CC+S+ WS + R T RE G G GR R F S CLD I PRW+AV +A+ A+G + LG+ +Y+S + ++ KYE GAQ + + K L ++++D+VPF+V K +++ P AL +V+ +V+IFL+YLL++P P + G WG+ID IRRYI LKT IC VGV VGV+ W L V LA+++ L+
Sbjct: 2 IPFLVALVLMYLLQPIVSVLTKAPRRWCDKCFMRRGERCCESVRRLVQSEQYHQYLAGKLMPLRESWSRSSLRAWTSSPWGSRESTGGGKTQEDDEDELDDLDLDEEHSLLRRGRIRHRPVVPPMTFQSRLTGTCHECIAFCLDKVIFPRWLAVFVALVVAVGILTGLGMFIYSSISSF--NWLKYELGAQRLTRRLAKLLAVVDINLNQDLVPFLVEKAKSLTPYALQGIVDCFSSGAFVLIFLMYLLMTPVSPPSGGTWGEIDTQIRRYILLKTLICTTVGVVVGVVFWLLCVDLAFLWALL 303
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A7S2V064_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V064_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.710e-34 Identity = 96/265 (36.23%), Postives = 140/265 (52.83%), Query Frame = 1
Query: 91 VQTETLTAICLLIIAACALGFMLYFLREILLPFAVAVFLMYLLQPMVNXXXXXPRRWCDKCCHRRGEECCQSLWSITRSRLMTEESQNLR-------EPDG-------------LGF----GGGAXXXXXXXGRRRIFMSCLDYPIIPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVAKTRAMV-PRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQID 810
+Q+E TAICLLI+A LG + Y L+ +L+PF VAV MYLLQP+VN P RWC+KCCHR+GE C +SL ++T+SR + + L E +G LG GG A +PR+VAV +A+S AL +++LG++VY S +L+ + KY++GA + L ++D + V A V P L LV+ +V+++IFL+YLL+ P RP A+ + GQID
Sbjct: 55 LQSEGFTAICLLIVACFVLGLVAYLLQAMLVPFFVAVLFMYLLQPIVNFLVMPPYRWCNKCCHRKGETCFESLQNVTKSRKPSGNANELMRGADRHDEEEGEAGGSPSKAAYGALGLSPAHGGTAPDLRVPRSTATQHSGSRPREFMPRYVAVFIAMSVALLLLLLLGLVVYRSVNNLQDNMKKYQKGANNFMSSLAGLLDSSPLNLDIQSLELKVTNALAAVAPYFLTCLVDIINYTVFMLIFLIYLLMIPTRPAATDMVGQID 319
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: I2CPB0_NANGC (Membrane protein-a permease n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB0_NANGC) HSP 1 Score: 108 bits (270), Expect = 1.090e-23 Identity = 63/156 (40.38%), Postives = 99/156 (63.46%), Query Frame = 1
Query: 460 PRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVAKTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGLI 927
PR +AV+LAI+FA+G V+ G+IVY S L+ D+ YE GA++ +++ L + S+++D+VP+++ + +P + + A V+IFLVYLL S + + GVW +ID+HIRRYIRLKT +C+ + V VG L L V + +FGL+
Sbjct: 4 PRSLAVMLAIAFAMGIFVLFGMIVYHSIQSLQHDWHIYELGAEQAVDNLNAWLTKLHVSLNDDLVPYLMDNLKKAIPTLVNDIWVAVANGALVLIFLVYLLGSRPQELPPGVWRKIDIHIRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLL 159
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A7S4DFQ9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFQ9_HETAK) HSP 1 Score: 106 bits (265), Expect = 7.790e-23 Identity = 64/162 (39.51%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 451 PIIPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVA---KTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGLI 927
P++PRW AV L + ALG + +LG++V+ S ++ KY QG Q++ L Y +M+ D+ ++ + + +P+ + ++ IFLVYLL+SP P + VWGQIDLH+RR+IRLKT ICL VGV +L L V LA VFGL+
Sbjct: 19 PLMPRWFAVCLTFALALGVLALLGLLVWESVAQVQQQAGKYRQGYQQLL----GVLNEYALTMNIDLDIYMDSFYNQVTTWLPKIFTETAKGLGYAFFICIFLVYLLLSPVLPAPNNVWGQIDLHLRRWIRLKTIICLTVGVCTAALLSALRVDLALVFGLL 176
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A7S1HYU5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HYU5_9EUGL) HSP 1 Score: 72.8 bits (177), Expect = 3.960e-11 Identity = 47/154 (30.52%), Postives = 88/154 (57.14%), Query Frame = 1
Query: 463 RWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDED-VVPFIVAKTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFG 921
R +AVL+AI+ + + G +Y S +++ PKY++GA + + + L++ ++E+ VVP+ + + ++P L+ L + + V+IFL+YLL+SP + GV+ +++ H+R YI +K A+ +G V LW L + + VFG
Sbjct: 1 RVLAVLVAIAIVVAVVSGSGYFMYLSLKSMQSQIPKYQKGAFRAYDKVSQLLRQVDIHVNEENVVPWGIDYLKNLLPNLLSALSFYLEKMLIVLIFLIYLLLSPSDARSDGVFSRVNEHVRLYIIMKGALSCLLGAMVAFTLWHLGISCSPVFG 154
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A7S3G1H2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G1H2_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 6.030e-9 Identity = 73/300 (24.33%), Postives = 131/300 (43.67%), Query Frame = 1
Query: 91 VQTETLTAICLLIIAACALGFMLYFLREILLPFAVAVFLMYLLQPMVNXXXXXPRRWCDKCCHRRGEECCQSLWSITRSRLMTEESQNLREPDGLGFGGGAXXXXXXXGRRRIFMSCLDYPII---PRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIK----KTLQRYGYSMDEDVVPF---IVAKTRAM--VPRALAFLVNAALQSVYVIIFLVYLLIS-------PRRPVASGVWGQIDLH----IRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFG 921
+Q + + CL+IIA ALG+MLY LR++L+P +A+ Y+L P+V+ C R E C ++ R RL + ++ + +S +D+ I P W+A ++ + A G + ++G I+Y S + AD +Y + + + YG +++ + +++ + V A+ F+ + +L +IFL+YLL+ R+ + G H I+ YI LK + + G G++LW L + LA VFG
Sbjct: 85 LQRQYIHTACLMIIAILALGYMLYLLRDVLVPLLLALLFYYILGPLVDLFM----------CRGRAETCI--VFRSLRRRLKAKIAKTRFST-----------------WNKFAVSAIDFLFICRMPNWLATIIVLGIAFGFLTLVGFIIYVSIQQVLADGDRYRDTLATLVDIYLFSNGTSNTTYGGFSKSEILSYAGTLISPDLLLSSVDAAMGFMTSGSLA----LIFLIYLLLERDPDAALKRKKMKEGKQKSTADHSEKQIKNYIVLKVLVSIATGALSGLLLWALGIPLAPVFG 351
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A7Y3DAX7_9DELT (AI-2E family transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3DAX7_9DELT) HSP 1 Score: 64.3 bits (155), Expect = 5.020e-8 Identity = 47/157 (29.94%), Postives = 82/157 (52.23%), Query Frame = 1
Query: 457 IPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKY-EQGAQEMAEHIKKTLQRYGYSMDEDVVPFIVAKTRAMVPRALAFLVNAALQSVYVIIFLVYLLISPRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGL 924
+PR +A+ + + LG++V + ++V S L A Y EQ + +A+ ++ ++ ++ + V+ + R + A S V+IF+++L++ +R ASG+WG+ + I+RYI K I L G VG+ L L V LA VFGL
Sbjct: 55 VPRSLAMGVTVFLGLGSLVAVAMLVSVSVGQLAAKSDLYTEQLGELIAQLLEWVPSQWRQEQEQALAQIPVSTVGGFLVRTANAVAGALSNSFVVLIFVLFLMLGGKRRAASGMWGEAEQRIKRYIATKAVISLATGFLVGLTLTLLGVPLAMVFGL 211
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Match: A0A524N8N3_9DELT (AI-2E family transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524N8N3_9DELT) HSP 1 Score: 60.8 bits (146), Expect = 5.630e-7 Identity = 54/165 (32.73%), Postives = 84/165 (50.91%), Query Frame = 1
Query: 457 IPRWVAVLLAISFALGAMVVLGVIVYTSFTHLEADFPKYEQGAQEMAEHIKKTLQRYGYSMDEDVV-PF--IVAKTRAMVPRALAF-LVNAALQSVYVIIFLVYLLIS----PRRPVASGVWGQIDLHIRRYIRLKTAICLGVGVSVGVILWGLHVQLAWVFGLI 927
+PR VA+LL + + + V S L + P YEQ E+ + L G + E ++ PF I T + V RAL L + +S V +F+++LL+ P +P SGVW +I+ ++RY+ +K + G VG+ LW L V LA+VFGL+
Sbjct: 6 LPRSVALLLTVFLTFVSFSFIAAFVSNSVRELAVNAPAYEQKVTELVDLTLAWLPIEGAVVKEKIIAPFREISTGTVSNVLRALTSQLASIVSRSFLVFMFVLFLLVGGSGKPMQP-RSGVWLEIEGRVKRYVIVKGLLSATTGSLVGLTLWALDVDLAFVFGLL 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7819.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7819.1.1 >prot_P-wetherbeei_contig7819.1.1 ID=prot_P-wetherbeei_contig7819.1.1|Name=mRNA_P-wetherbeei_contig7819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp MRRPHSVSVDAAAMRRKLPFDSFSLGKVVQTETLTAICLLIIAACALGFMback to top mRNA from alignment at P-wetherbeei_contig7819:252..2969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7819.1.1 ID=mRNA_P-wetherbeei_contig7819.1.1|Name=mRNA_P-wetherbeei_contig7819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2718bp|location=Sequence derived from alignment at P-wetherbeei_contig7819:252..2969+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7819:252..2969+ >mRNA_P-wetherbeei_contig7819.1.1 ID=mRNA_P-wetherbeei_contig7819.1.1|Name=mRNA_P-wetherbeei_contig7819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig7819:252..2969+ (Phaeothamnion wetherbeei SAG_119_79)back to top |