mRNA_P-wetherbeei_contig7814.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A835YZA0_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA0_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.510e-36 Identity = 84/147 (57.14%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGA--VDVAVFGSFVGMSLVHELQMVASGGGGTTSHVAHLAGILAGALLVLLLRR 846
QL+TALF+HA EHLM N F LLVF KMVEED+G LL FL+CGA S ISL P+N +S+GASGA+FGLYAV+VL+K+LP G + R V+ AVFG FV +L+ EL++V SG T+H AH AG+ GALLV L RR
Sbjct: 150 QLVTALFMHADKEHLMFNMFMLLVFGKMVEEDVGKSALLGSFLVCGALSNGISLWFSPRNVTSQGASGAIFGLYAVSVLAKLLPKHGASAAHRARSLVEAAVFGWFVTATLMDELRLVTSGHATRTNHAAHFAGVTVGALLVWLTRR 296
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A1E7FJN4_9STRA (Rhomboid-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJN4_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.070e-28 Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPV-SWRGAVDVAVFGSFVGMSLVHELQMVASGGGGTTSHVAHLAGILAGALLVLLLRRVL 852
QLIT+ F H HL N F LL+F K VE++LG+ GLL +L CG + SLVLLPK T S GASGAVFGL++V++LS++ R + WR ++V + G FV ++E++ ASGG +HVAHL+G AG ++L+LR +L
Sbjct: 12 QLITSTFCHGDTAHLSGNLFLLLLFGKSVEDELGSSGLLFSYLFCGVVANITSLVLLPKYTVSLGASGAVFGLFSVSILSRL--SSWRDIFDWRKIIEVGILGQFVFGQFLNEVKTAASGGIVGINHVAHLSGAAAGIGMILILRMLL 157
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A7S0L5F9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5F9_9EUKA) HSP 1 Score: 122 bits (305), Expect = 5.800e-28 Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASGGGGTTSHVAHLAGILAGALLVLLLRRVLPGM 861
Q +++ F HA HL NAF LL+F + VE++LG GL+ + CG A+ SLVLLP +T S GASGAVFGL+AV+VL+++ R + WR V+VAV G F ++ E Q+ A GG +HVAHL+G AG LLV+ +RR+L M
Sbjct: 119 QPLSSTFCHASRAHLSGNAFLLLLFGRSVEDELGWAGLVFSYAFCGVAANFASLVLLPSSTVSLGASGAVFGLFAVSVLARL---SWRDLGWRKLVEVAVLGQFAFGQVLKEAQVAAGGGIAGINHVAHLSGAGAGVLLVVAMRRLLAQM 265
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A7S2UJQ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJQ9_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.250e-26 Identity = 66/151 (43.71%), Postives = 96/151 (63.58%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPV-SWRGAVDVAVFGSFVGMSLVHELQMVASGGGGTTSHVAHLAGILAGALLVLLLRRVLPGM 861
Q IT+ F H HL N F LL+F + VE++LG+ GL+ ++ CG S +SL +LP+NT S GASGAVFGL++V++ S++ R + WR ++V V G FV + E + ASGG +HVAHL+G +AG +VL+LR+V+ M
Sbjct: 153 QPITSTFCHGDKAHLSGNTFLLLLFGRSVEDELGSFGLVFSYIFCGVVSSLVSLAMLPRNTVSLGASGAVFGLFSVSIFSRLSL---RDIFDWRKIIEVGVLGQFVVSRFLDEAKTAASGGIVGINHVAHLSGAVAGCAMVLILRKVVQAM 300
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: E1Z4X5_CHLVA (Rhomboid domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z4X5_CHLVA) HSP 1 Score: 115 bits (289), Expect = 8.250e-26 Identity = 72/151 (47.68%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKN-TSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASGG----GGTTSHVAHLAGILAGALLVLLLRRV 849
Q +T+ F+HA +HL NAF+LLVF + VEE+ GA+GL L +L+ G S + P T S GASGAVFGL+ VAV++K P S R +++ + GSFV ++ ELQM A GG G HVAHLAG AG LLVLLL R+
Sbjct: 110 QFVTSTFMHANWQHLSSNAFALLVFGRQVEEEEGALGLWLTYLVAGVGGAVASYLSSPHTRTISLGASGAVFGLFMVAVITKFKP------SLRKLLELVILGSFVVQQVLGELQMAAGGGLTVGGMQVGHVAHLAGAAAGVLLVLLLSRL 254
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A7S3U8L9_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U8L9_9CHLO) HSP 1 Score: 111 bits (277), Expect = 5.260e-24 Identity = 66/162 (40.74%), Postives = 99/162 (61.11%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTS------------SKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASGG----GGTTSHVAHLAGILAGALLVLLLRRV 849
Q++T+ F HL N F L +F ++VEE+ GA G+++ +LICGAA+ SLV+LP+ ++ S GASGAVFGL+AVAV+ KM+ G S+R ++ + G FV L+ E+ M A+GG G + +H+AH++G LAG L+ LL R+
Sbjct: 102 QVVTSTFCXXXWSHLSGNLFLLYIFGRLVEEEEGAFGVVMAYLICGAAASLASLVMLPRTSAQGFLGMGNAPVFSVGASGAVFGLFAVAVMVKMMKG----FSFRKLLEAGILGQFVVEKLLGEVHMQANGGSLVAGASVNHIAHISGALAGVFLIFLLTRL 259
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A7S4QCI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QCI9_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.880e-24 Identity = 66/141 (46.81%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASGGGGT-TSHVAHLAGILAGALLV 831
Q +T F HA HL N F LL+F + VE+D G GLL + CG + S+++LPKNT S GASGAVFGLYAV+ L+ + R ++WR V+V+V G FV L E+ V SGG T SH+AHL+G G +LV
Sbjct: 163 QPLTTCFCHADRFHLSNNLFLLLLFGRSVEDDQGWGGLLFSYFFCGVFASLASIIILPKNTISIGASGAVFGLYAVSTLATL---SWRDLNWRKLVEVSVLGEFVFRQLSSEISAVTSGGSNTGISHIAHLSGAAGGVILV 300
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: UPI001A043EA0 (Rhomboid family intramembrane serine protease n=1 Tax=Gloeomargaritaceae cyanobacterium C42_A2020_066 TaxID=2747801 RepID=UPI001A043EA0) HSP 1 Score: 107 bits (267), Expect = 2.230e-23 Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASGGGGTTSHVAHLAGILAGALLVLLLRR 846
QL T+ F+H HL VN F L +F ++VEE+ G + L+L +LICG + SL+ LP + S GASGAVFGL+ +VL K+ WR ++V + G FV M + EL + G GTT+ VAHL G + GA+LVL LRR
Sbjct: 54 QLTTSQFLHGDWVHLSVNLFFLYIFGRLVEEEEGTLDLVLTYLICGFGANVFSLLFLPTDGISLGASGAVFGLFVTSVLIKLR------WHWRNLLEVLILGQFVIMQVWTELAEL--GDQGTTNRVAHLGGAVTGAVLVLALRR 190
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A830B6V6_9LAMI (Rhomboid domain-containing protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830B6V6_9LAMI) HSP 1 Score: 107 bits (268), Expect = 2.300e-23 Identity = 66/154 (42.86%), Postives = 89/154 (57.79%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASGGGG--------TTSHVAHLAGILAGALLVLLLRRV 849
Q ITA F H HL N F L +F K+VEED G + L L +++ GA + +S ++LP+N S GASGAVFGL+AV+VL KM WR ++V + G FV ++ Q AS GGG +H+AHL+G L G +L+ LL RV
Sbjct: 59 QFITATFCHFNWNHLSSNLFFLYIFGKLVEEDEGNLALWLSYILTGAGANLVSWLVLPRNAVSIGASGAVFGLFAVSVLVKM------SWDWRKILEVLILGQFVVEKVMEAAQASASIGGGLRGGLALQNVNHIAHLSGALIGVVLIWLLSRV 206
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Match: A0A087SLK6_AUXPR (Rhomboid protease AarA n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SLK6_AUXPR) HSP 1 Score: 107 bits (266), Expect = 2.570e-23 Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 412 QLITALFVHAGLEHLMVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPK-NTSSKGASGAVFGLYAVAVLSKMLPGGGRPVSWRGAVDVAVFGSFVGMSLVHELQMVASG-----GGGTTSHVAHLAGILAGALLVLLLRRVLPG 858
Q ITA F HA +HL NAFSLL+F ++VE++ G +G+ +L+CG S P +T S GAS AVFGL+AVAVL+K P + R ++ V G+FV L++E+ MV+SG G H+AHLAG L G +LVL+L R+ G
Sbjct: 41 QFITATFCHASWDHLSGNAFSLLIFGRIVEDEEGGVGVWATYLLCGLGGCLASYFSAPHTHTVSLGASAAVFGLFAVAVLTKFKP------TLRHLLEAVVLGTFVMKQLLNEVHMVSSGRALTLAGVQVGHLAHLAGALVGVVLVLILSRLPSG 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7814.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7814.1.1 >prot_P-wetherbeei_contig7814.1.1 ID=prot_P-wetherbeei_contig7814.1.1|Name=mRNA_P-wetherbeei_contig7814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp MVNAFSLLVFAKMVEEDLGAIGLLLCFLICGAASGAISLVLLPKNTSSKGback to top mRNA from alignment at P-wetherbeei_contig7814:2..1805+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7814.1.1 ID=mRNA_P-wetherbeei_contig7814.1.1|Name=mRNA_P-wetherbeei_contig7814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1804bp|location=Sequence derived from alignment at P-wetherbeei_contig7814:2..1805+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7814:2..1805+ >mRNA_P-wetherbeei_contig7814.1.1 ID=mRNA_P-wetherbeei_contig7814.1.1|Name=mRNA_P-wetherbeei_contig7814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig7814:2..1805+ (Phaeothamnion wetherbeei SAG_119_79)back to top |