mRNA_P-wetherbeei_contig78.11.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A7R9V7A6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V7A6_9CHLO) HSP 1 Score: 108 bits (269), Expect = 2.030e-25 Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 4 FLSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLL 423
FLS +D+ IFQ N V+ AW +LIV P+W + +V + + Y ALYAAL++N + +GG STL GV L A+ A LPAW HY+AFDL+ G+ I + + +P+ ++A +LV +++ GP GL +Y ++
Sbjct: 5 FLSYTDDDIFQCLNGVLLAWALLIVAPKWRPTQAIVLLSAMFYSALYAALIFNMIYQGGA----LDFAAMSTLPGVAKLFATPEAVLPAWVHYIAFDLWTGRWIAMDA-ASRQIPRLLIAPILVATLMLGPVGLFMYLMI 139
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A250XKW1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKW1_9CHLO) HSP 1 Score: 103 bits (256), Expect = 1.690e-23 Identity = 56/142 (39.44%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 1 LFLSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKT----MEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLY 414
LF SDEQ+FQL N+V+PAWV+LI+ P+W+ + +V L C LYA L+ N + L T ++ + GV LL++++ LPAW H+ AFDL+ G+ I ++ + + P+ ++A +L+ SM+FGP GLL Y
Sbjct: 5 LFSQFSDEQLFQLVNVVLPAWVLLIISPKWKTTQAVVTLAASLMCLLYALLLANTL-------LSPTSDIQIQDMFSYDGVARLLSAKSTVLPAWVHFAAFDLWTGRWIAQDAM-SRRFPRLLLAPLLLLSMMFGPVGLLGY 138
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A8J4AXJ2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXJ2_9CHLO) HSP 1 Score: 103 bits (257), Expect = 3.190e-23 Identity = 54/148 (36.49%), Postives = 88/148 (59.46%), Query Frame = 1
Query: 16 SDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLLSRANAEISKQKT 459
+DEQ+F L N+++P W++L + PRW + + + LYAAL+ + + K + T GV LLA++AA LP W H+ AFDL+VG+ I +++++ N PQ ++A L +M+FGP GLLLY L+ +I ++K+
Sbjct: 40 TDEQLFNLVNIILPGWLLLALAPRWRHSQTVSAVAAIAMSLLYAALLISSLFFSK-SDEKLDLADMFTYEGVVRLLANRAAALPCWVHFAAFDLWVGRWIADDSIKHNV-PQMLLAPCLFTTMMFGPAGLLLYHLIRTRFQKIGRKKS 185
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A150GUA7_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GUA7_GONPE) HSP 1 Score: 100 bits (248), Expect = 2.710e-22 Identity = 55/151 (36.42%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 7 LSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLLSRANAEISKQKT 459
L+ +D+Q+F L N+V+PAW++L V P+W + + A LL ALY AL+ + + G + + F TL GV L+ + A LP W HY AFDL+VG+ + +++ +PQ ++ L ++ GP GLL Y+L+ + KQKT
Sbjct: 6 LAYTDKQLFDLINVVLPAWLLLAVAPKWRHTKTVSAAAALLMSALYTALLVSFMVAPPDGEVLDFSDMF-TLEGVGRALSKKTAVLPCWVHYAAFDLWVGRWMAADSVE-RGVPQLLLIPCLFLTLFAGPAGLLAYWLIRMPFNKAGKQKT 154
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: E1ZNY5_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZNY5_CHLVA) HSP 1 Score: 99.4 bits (246), Expect = 4.780e-22 Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 7 LSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQ-NILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLY 414
L +DEQ+F LQN V+ AW +L V PR ++V AT L + ALY LM + + +G F + +GV LL+ Q LPAW HYV FDL+ G+ +L+ R +PQ ++AV L F+++ GP+GLLLY
Sbjct: 6 LPFTDEQLFPLQNGVLVAWALLAVAPRARFTMRVVTATALFFSALYVGLMADAMGKGDT-------PDFFSYAGVSKLLSMQRVVLPAWIHYVVFDLWTGRWEVLDAGRR--GVPQILMAVPLFFTLMLGPSGLLLY 133
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A150GUE9_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GUE9_GONPE) HSP 1 Score: 99.4 bits (246), Expect = 5.320e-22 Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 1
Query: 1 LFLSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLLSRANAEISKQK 456
L L +D Q+F L N+V+PAW++L V PRW + + A LL ALY A + V G K ++ F L GV L+++A LP W HY AFDL+VG+ I +++ +PQ ++ L + GP GLL Y+L+ + KQK
Sbjct: 4 LGLPHTDAQLFDLINVVLPAWLLLAVAPRWRHTKTISAAAALLMSALYTATL-GTVMIAPPAGDKLEVKDFFNLEGVGRALSTKALVLPCWVHYAAFDLWVGRWIAGDSVE-RGVPQLLLIPCLFLTWFMGPAGLLAYWLVRMPFNKAGKQK 153
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A150GU38_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GU38_GONPE) HSP 1 Score: 99.4 bits (246), Expect = 5.320e-22 Identity = 57/151 (37.75%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 7 LSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVA-RGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLLSRANAEISKQK 456
L R+DEQ+F L N+V+PAW++L P W + + A LL C+LYAAL+ +A R GGL + F + GV + +AA L W HY AFDL+VG+ + +++ +PQ ++ L+ ++ GP GLL Y+L+ + KQK
Sbjct: 6 LPRTDEQLFGLVNVVLPAWLLLAAAPAWRHTKTISAAAALLMCSLYAALLVTMMAVRPEGGGLD--VRDFFSHEGVFRTFSKKAAVLICWVHYAAFDLWVGRWMAADSVE-RGVPQLLLIPCLLIALFVGPAGLLAYWLVRTPFLKAGKQK 153
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A8J9RD65_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RD65_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 1.500e-21 Identity = 53/149 (35.57%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 7 LSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLLSRANAEISKQ 453
L +D QIFQ NLV+PAW++LI+ PRW+ T + + LY L +A+ VG + ++F T GV+ L+S LPAW HYVAFDLF + ++++++ ++P ++ L+ +M+ GP GLL YF++ A + ++
Sbjct: 6 LDLTDAQIFQGVNLVLPAWLLLILLPRWKFSHSFATFTAVGFSILYTLLFGTLLAQP-VGDF--SFDKFFTYEGVKDALSSPEVVLPAWVHYVAFDLFTAKWMVQDSIP-RSIPHLLLVPCLLLTMMLGPMGLLSYFVVRTITATVRRK 150
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A8IXY6_CHLRE (Predicted protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8IXY6_CHLRE) HSP 1 Score: 97.8 bits (242), Expect = 2.380e-21 Identity = 60/175 (34.29%), Postives = 87/175 (49.71%), Query Frame = 1
Query: 7 LSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMVAVVLVFSMLFGPTGLLLYFLLSRANAEISKQKTR*FQRLLGLPVSGGEIVKNCQRFK 531
L +D Q+F N+V+PAW++L + PRW+ +V A L LY+A + + + G E F TL GV LLA ++A LP W HY AFDL+VG+ I + + +PQ ++ L M+ GP GL+ YF LL LP SGG+ ++ K
Sbjct: 6 LEFTDSQLFDTLNVVLPAWILLALLPRWKHTYTVVTAAALYTSLLYSACLVSMMIAPSEDGAPDFSEMF-TLEGVSKLLAKKSAALPCWTHYAAFDLWVGRWIATDAMD-RGVPQLLLIPCLFLCMMVGPIGLVAYF-------------------LLRLPFSGGKKATASRKSK 159
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Match: A0A835YLE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE3_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.930e-21 Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 1
Query: 7 LSRSDEQIFQLQNLVMPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTMEQFSTLSGVRSLLASQAATLPAWFHYVAFDLFVGQNILEENLRTNALPQPMV--AVVLVFSMLFGPTGLLLYFLLSRA-NAEISKQKTR 462
L SDEQ+F LVMPAW +LI+ PR++ + + T+ Y Y LM + GG G+K +E F++L+GVR LL TL AW HY+AFDLF + NL P+V A VL F+ + GP GL + +L NA +Q+ R
Sbjct: 6 LQYSDEQLFGACQLVMPAWALLILAPRFKASQAVAGVTIGFYAIFYTLLMAHATTSGG--GMK--LEDFNSLAGVRGLLVHPDITLAAWVHYLAFDLFTALMVTRYNLSRGEATVPLVLMAPVLFFTCMAGPVGLCAFAVLHALFNAARGQQQQR 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig78.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig78.11.1 >prot_P-wetherbeei_contig78.11.1 ID=prot_P-wetherbeei_contig78.11.1|Name=mRNA_P-wetherbeei_contig78.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MPAWVVLIVFPRWERRRQLVQATVLLYCALYAALMWNDVARGGVGGLKKTback to top mRNA from alignment at P-wetherbeei_contig78:12292..13589+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig78.11.1 ID=mRNA_P-wetherbeei_contig78.11.1|Name=mRNA_P-wetherbeei_contig78.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1298bp|location=Sequence derived from alignment at P-wetherbeei_contig78:12292..13589+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig78:12292..13589+ >mRNA_P-wetherbeei_contig78.11.1 ID=mRNA_P-wetherbeei_contig78.11.1|Name=mRNA_P-wetherbeei_contig78.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig78:12292..13589+ (Phaeothamnion wetherbeei SAG_119_79)back to top |