prot_P-wetherbeei_contig78.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig78.2.1
Unique Nameprot_P-wetherbeei_contig78.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length252
Homology
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A835Z6C4_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C4_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.290e-114
Identity = 166/246 (67.48%), Postives = 197/246 (80.08%), Query Frame = 0
Query:    7 SFLKEPAPGKGPLGQWYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQT 252
            +FL+E  PG+G  G WYVR+DPT+S +LPW++KP I  G ++GD GFDPL L+KTFDISW+RAAELKHGRVCMLAAVGL+ PELVQHP GF+GF F  EFT+MN IAAL AVPKFGLAQIVLACGLIEIATFGSNYNSA++++D LS LER  +  N+R FLTG AKTT+++N FG+A  VGF        GDLGFDPLG AA+GV+ +YA +EIKHARLAMIGV GML  QFY  S   G+L+QT
Sbjct:   45 AFLRETEPGQGAAGAWYVREDPTLSTSLPWVTKPVIGDGDMIGDVGFDPLSLSKTFDISWLRAAELKHGRVCMLAAVGLVTPELVQHPVGFDGFSFPAEFTQMNAIAALGAVPKFGLAQIVLACGLIEIATFGSNYNSAFNYEDGLSLLERAKLEGNERTFLTGVAKTTSNINKFGNALEVGFEKPGSDNAGDLGFDPLGLAANGVRSDYALAEIKHARLAMIGVLGMLLGQFYEPSK--GVLQQT 288          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: W7TZB5_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB5_9STRA)

HSP 1 Score: 306 bits (783), Expect = 2.130e-101
Identity = 150/254 (59.06%), Postives = 190/254 (74.80%), Query Frame = 0
Query:    1 RAFVAASFLKEPAPGKGPLGQWYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTND--VNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQT 252
            +A  A ++LKE  PG GPLG+WYVRDDPT+S ALPW+++P+I  GSLVGD GFDP GL+K FD++W+R AELKHGR+ MLA +G++ PELVQ PAGFEGF FAPEF+E+N I AL+AVP  GLAQI+LA   +E+ATF   YN  ++F+DNL+ LER  + + +   L+GAAKT     VNPFG+A +VGF   E   PGDLGFDP+GF  +G+ P+YA +EIKHARLAM+G AGML Q+F    G   IL QT
Sbjct:   43 KAATANNYLKEVEPGSGPLGKWYVRDDPTLSTALPWVTRPEIGDGSLVGDFGFDPFGLSKIFDVNWLRNAELKHGRLAMLATLGMVTPELVQAPAGFEGFKFAPEFSELNAIKALSAVPTLGLAQIILAISFVEVATFSKVYNERFTFEDNLTPLERKKVVQGRFSDLSGAAKTQAKAGVNPFGNAVDVGFQDPEKFVPGDLGFDPVGFTDNGINPDYALAEIKHARLAMLGAAGMLIQEFLQPKG---ILSQT 293          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A7R9U4N3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4N3_9STRA)

HSP 1 Score: 259 bits (662), Expect = 3.620e-83
Identity = 135/245 (55.10%), Postives = 163/245 (66.53%), Query Frame = 0
Query:    8 FLKEPAPGKGPLGQWYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQT 252
            FL++P  G GP GQW  +    +S ALPW  KP I  G+L GD GFDP GL+K F ++W+RAAE+KHGRVCMLAAVGL+APELVQ+P G+EG  F P F EMN   AL  VP  GLAQIVL  GL+EI +  SNY   ++FDD L+ +ER  I      FLTG AK     +     E +   V E  +PGDLGFDPLGFA  G+KPE+AE+EIKHARLAM+G  GML QQ  A +   G+LE T
Sbjct:   44 FLRDPLAGFGPDGQWLPKTKEGMSQALPWSDKPVIGDGNLAGDRGFDPWGLSKIFPLAWLRAAEIKHGRVCMLAAVGLIAPELVQNPVGYEGLQFDPVFQEMNAFKALGTVPGLGLAQIVLVAGLVEIFSIKSNYEGTFTFDDGLTSIERSDIDSGAFKFLTGGAKNALAADTKSKFETL--QVTEQVSPGDLGFDPLGFADDGIKPEFAEAEIKHARLAMLGTLGMLIQQ--AKTPEFGLLEYT 284          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: D7FPU7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPU7_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.340e-78
Identity = 134/259 (51.74%), Postives = 166/259 (64.09%), Query Frame = 0
Query:    2 AFVAASFLKEPAPGKGPL--------GQWYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAK-TFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQ 251
            AFVA S +        P         G W+   D T SVALPW  KP I  G +VGD GFDPL LA    D+ W+R AELKHGR+CMLA VG++APELVQHP GF GF FAPEFT+MN  AAL++VP+ GLAQIV+ C LIE+A+F  N    Y ++D+L+KLE  + +  +  +L GAAK    + P    EN   +  +   PGDLGFDPLG AA+G+ P+YA +E+KHARLAMIG  GM  QQ  A    GG+LEQ
Sbjct:   16 AFVAPSLVSSRVASSAPKTTMMAEVPGSWWTPSDGTKSVALPWADKPLIGDGDMVGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQHPVGFSGFEFAPEFTQMNAFAALSSVPRLGLAQIVILCSLIEVASFTGNLTEKYLYEDDLTKLELKNKSLGKTDYLAGAAK----IAPV--TENKDQVFEDTVIPGDLGFDPLGLAANGINPDYALAELKHARLAMIGFLGMAVQQ--AVDPNGGVLEQ 266          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A7S1XTT1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTT1_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.750e-74
Identity = 119/217 (54.84%), Postives = 148/217 (68.20%), Query Frame = 0
Query:   22 WYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQ 238
            W  +    +S ALPW  KP I  G+L GD GFDP  L+  F ++W+RAAELKHGRVCMLAAVGL+APEL QHP GFEG  FAPEFTEMN   AL   P  GLAQI+L CGL+EI TFG  Y+  +++DD L+K+E++ I      FLTG AK     +     + +   V EG+  GD+GFDPLGFA +GV P+YA +E+KH R+AM+GV GML QQ
Sbjct:   58 WLPKPVDGMSAALPWSDKPVIGDGTLAGDQGFDPWNLSSVFPLTWLRAAELKHGRVCMLAAVGLVAPELFQHPIGFEGLKFAPEFTEMNAFKALNTAPGLGLAQILLFCGLVEIFTFGKAYDGTFTYDDGLTKIEKEDIDAGAFKFLTGGAKNAVAADTASKFDGL-TTVDEGRA-GDIGFDPLGFADNGVNPDYALAELKHGRVAMLGVLGMLIQQ 272          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A0G4G8I9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G8I9_VITBC)

HSP 1 Score: 230 bits (586), Expect = 1.450e-71
Identity = 122/246 (49.59%), Postives = 158/246 (64.23%), Query Frame = 0
Query:    8 FLKEPAPGKGPLGQWYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFD-DNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQT 252
            + ++P PG GPLGQWYVRDDP +S ALPW+S+P I  G+LVGD GFDP GL+K  +I W+R AELKHGRVCMLA+VGLLAPELVQ P GF+G  F P F+E++   AL A+P  G+AQI++A  LIE+ T    YN        +L+  ER  +      FL G A    ++   G            + PGDLG+DPLG A +G++ ++A +EIKHARLAMIG  GM+ Q F   +    IL+QT
Sbjct:   50 YTRQPEPGVGPLGQWYVRDDPNISPALPWVSRPTIGDGNLVGDFGFDPFGLSKLVNIQWLRNAELKHGRVCMLASVGLLAPELVQRPEGFKGIDFVPAFSELSPYKALTALPPAGIAQIIIAIALIELTTAKYLYNPTTKIKLADLTLRERALVQTGNTRFLAGGAFA--ELGRLGEERIEERPDAVSRVPGDLGWDPLGLADNGIREDWALAEIKHARLAMIGTLGMMLQAFIEPNKP--ILQQT 291          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A0G4FH94_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FH94_VITBC)

HSP 1 Score: 197 bits (502), Expect = 3.580e-59
Identity = 118/255 (46.27%), Postives = 154/255 (60.39%), Query Frame = 0
Query:    8 FLKEPAPGKGPLGQWYVRDDPT------VSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFD-DNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEG---KTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQT 252
            + ++P+PG      W   D P       VS+ALPW++KP I  G+LVGD GFDPLGL+K  D+ ++R AELKHGR+CMLAAVGLLAPELVQ PAGF+G  F P F+EMN   AL A+P  GL QI++A  LIE+ T    ++ +      ++S+ ER  +      FL G+A+         S  N   M   G   + PGDLGFDPLG A  G++ ++A +EIKH RLAM+ V GML Q    +    GILE T
Sbjct:   24 YTRQPSPGGEGQKVWERLDVPQIRVPSDVSLALPWVAKPQIGDGTLVGDFGFDPLGLSKIADVGFLRNAELKHGRLCMLAAVGLLAPELVQKPAGFDGLEFVPAFSEMNPFKALFAMPPAGLMQILIAIALIELNTAKFLWDPSMKMRITDMSEKERLLVQTGNTRFLAGSARPQ-----LASLGNEVVMEKSGMFSRVPGDLGFDPLGLADEGIREDWALAEIKHGRLAMLAVLGMLLQ--VGARPDKGILEMT 271          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A0G4HNT2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HNT2_9ALVE)

HSP 1 Score: 179 bits (455), Expect = 6.170e-52
Identity = 103/247 (41.70%), Postives = 129/247 (52.23%), Query Frame = 0
Query:    6 ASFLKEPAPGKGPLGQWYVRDDPTVSVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILEQT 252
            A +LKE  P   P G WY+  DP +S + PW+ K  I  G+L GD GFDPL L++  D  WMR AELKHGR+ MLA VGLL PEL+  P GF+G +F P F  +  + AL   P  G+ QI L   LIE  T     N        + K     I  +   F                         E +TPG +GFDP GFA +G++ ++AE+EIKHARLAM+G AGML Q          ILEQT
Sbjct:   70 ADYLKEAEPAAYPRGAWYIVQDPEISKSAPWVKKEQIYDGTLAGDYGFDPLRLSERRDAWWMRTAELKHGRIAMLACVGLLTPELILKPEGFKGLNFVPAFDAVAPLEALRKAPPLGILQIALVLALIEFQTLKYVKNPMEYLQPYMDK----GIKFSDEYF-------------------------EKRTPGSIGFDPAGFADNGIRSDFAEAEIKHARLAMVGAAGMLIQSLIKPDMP--ILEQT 285          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: A0A8J6CE65_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CE65_DIALT)

HSP 1 Score: 126 bits (317), Expect = 5.700e-32
Identity = 82/208 (39.42%), Postives = 108/208 (51.92%), Query Frame = 0
Query:   31 SVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEF--TEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLA 236
            S ++P+  KP    G+L+GD GFDPLGL+  +DI W+RAAE+KHGRV MLAA G L  E  + P         PE   T    + AL+  P  GLAQIV    LIE+ T  S   +   ++D+                                  N+    G G +PGDLG+DPLG +A G+  +YA +E+KH RLAM+G AGMLA
Sbjct:   48 SASIPFAPKPAKLDGTLLGDIGFDPLGLSNLWDIKWLRAAEIKHGRVGMLAATGFLVQEGYRLPGPASN----PELFATAKTPLEALSTAPPLGLAQIVALIFLIELVTSSSLLITDSFYEDS---------------------------------PNLKAPAGSG-SPGDLGWDPLGLSAGGLNLDYAIAELKHGRLAMLGAAGMLA 217          
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Match: L1IG04_GUITC (Light-harvesting Chl a protein 2 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IG04_GUITC)

HSP 1 Score: 120 bits (300), Expect = 1.020e-29
Identity = 78/216 (36.11%), Postives = 100/216 (46.30%), Query Frame = 0
Query:   31 SVALPWISKPDIAGGSLVGDNGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGFHFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDDNLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDLGFDPLGFAAS-GVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGT 245
            S A+P++S+P    G++ GD GFDPLG +  FD+ W+R AELKHGRVCML  +G L  E  Q P         P F E   I A   VP  GL QI    G IEI                        ++ N R+                   + G M  +G+ PGDLGFDPL  ++       +  +E+KH RLAMIG+ GML QQ      T
Sbjct:   40 SYAVPFLSRPPALDGTMAGDVGFDPLGFSNYFDLKWLREAELKHGRVCMLGTLGFLVQEKFQLPL--------PGFGEKLPIEAFFTVPTGGLWQIFFTLGAIEI------------------------LSNNGRI-------------------SPGDMFADGRAPGDLGFDPLNLSSDESALRRFELAELKHGRLAMIGLGGMLHQQLLTKQPT 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig78.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6C4_9STRA2.290e-11467.48Light harvesting complex protein n=2 Tax=Tribonema... [more]
W7TZB5_9STRA2.130e-10159.06Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A7R9U4N3_9STRA3.620e-8355.10Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
D7FPU7_ECTSI1.340e-7851.74Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A7S1XTT1_9STRA1.750e-7454.84Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G8I9_VITBC1.450e-7149.59Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4FH94_VITBC3.580e-5946.27Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4HNT2_9ALVE6.170e-5241.70Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A8J6CE65_DIALT5.700e-3239.42Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
L1IG04_GUITC1.020e-2936.11Light-harvesting Chl a protein 2 n=2 Tax=Guillardi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 29..251
e-value: 7.9E-42
score: 145.4
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 34..239
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 24..142
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 193..243
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 44..238
e-value: 1.6E-35
score: 123.0
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 34..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig78contigP-wetherbeei_contig78:4195..5164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig78.2.1mRNA_P-wetherbeei_contig78.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig78 4195..5164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig78.2.1 ID=prot_P-wetherbeei_contig78.2.1|Name=mRNA_P-wetherbeei_contig78.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
RAFVAASFLKEPAPGKGPLGQWYVRDDPTVSVALPWISKPDIAGGSLVGD
NGFDPLGLAKTFDISWMRAAELKHGRVCMLAAVGLLAPELVQHPAGFEGF
HFAPEFTEMNTIAALAAVPKFGLAQIVLACGLIEIATFGSNYNSAYSFDD
NLSKLERDSIAKNQRVFLTGAAKTTNDVNPFGSAENVGFMVGEGKTPGDL
GFDPLGFAASGVKPEYAESEIKHARLAMIGVAGMLAQQFYASSGTGGILE
QT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln