mRNA_P-wetherbeei_contig778.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig778.1.4
Unique NamemRNA_P-wetherbeei_contig778.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 2.670e-153
Identity = 243/417 (58.27%), Postives = 304/417 (72.90%), Query Frame = 1
Query: 1390 MQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDD---LLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRH 2631
            MQVGFAMLEVGSVS KNTKAVL+KN+GDA++GAICWWL+G+G A+G    GF+G S FAL G +            +G K A W+F+WAFAATS TIVSGAIAERVK+ +Y+ Y+IA++S IYP+VVHW W  +GWAS  R  D+   LL  CGA DFAGSGVVHMVGG  ++VAAI  KPR  RF   G   ++PQQSPALQTLGTLILW GWY FN GS + ++ GRSVVAA+A+VS+TI PSAG  ++V+ VKML+ KFD+  VNNGIL+GLVA+T+G P+V PE A ++G V+  +Y+  + L+L+L+IDDVVDA PVH+F G+WG++  GLF T   +  TY   G +RA  CCG FYGCG  LL A +    AILAWVG  S+ILF  I+ T+G+RV   +E  GMD TRH
Sbjct:   52 MQVGFAMLEVGSVSSKNTKAVLLKNIGDASLGAICWWLVGFGLAFGDDAHGFIGTSVFALHGGESR-------FGTSGLKEAEWVFDWAFAATSVTIVSGAIAERVKIVSYVTYAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGIAALVAAIAVKPRKSRFRH-GHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVIAVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVMGVVSAFLYYASANLLLKLKIDDVVDAAPVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPEDQELLGMDLTRH 460          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI)

HSP 1 Score: 466 bits (1200), Expect = 7.890e-151
Identity = 248/442 (56.11%), Postives = 306/442 (69.23%), Query Frame = 1
Query: 1336 FACVLLFFCICNFLNVTVMQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGGRKTSEALK 2661
            F  +L+FF          MQ GFAMLEVGSVS KNTK +LIKN+GDA++GAICWWLLGYG A+G + G F+G + F L+G  FE  DG   T  NGY +A WLF WAFAAT+ATIVSGA+AERV   AYI+YS+ ++S IYP+VVHW W + GWAS+ R TD LLF CG IDFAGSGVVHM GG  ++ AAIV  PR  RFNEDG+ N +PQQS  LQ+LGTLILW GWYGFNG S LY+  G + VAAK MV++TI+ + GA   V+L K     +D    NNG+LAGLV +TAGC    PE AM+IG ++G +Y   SK+++ L+IDDVVDA PVH F G WGV A  LFAT +NY   Y     +RA +C GAFYG  G  +GA  V+ LA+ AWV      LF+GIK T+GMRV  + E+ GMD ++HGG+   E +K
Sbjct:   36 FGAILVFF----------MQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAFGDTSGKFIGTNNFDLKGALFEADDG---TLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGW-AGGWASAWRETD-LLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIV-GFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAY----YDRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALFMGIKMTVGMRVDKEMEQIGMDDSKHGGQTYPEMMK 457          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI)

HSP 1 Score: 447 bits (1151), Expect = 1.690e-143
Identity = 236/437 (54.00%), Postives = 302/437 (69.11%), Query Frame = 1
Query: 1351 LFFCICNFLNVTVMQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGGRKTSEALK 2661
            +F+ +   + V  MQ GFAMLEVGSVS KNTK +LIKN+GDA++GAICWWL GYG A G + G F+G++AFAL+G+ FE  DG   T  NGY +A WLF WAFAAT+ATIVSGA+AERV   AYI+YS+ ++S IYP+VVHW W   GWAS+    +DLLF+CG IDFAGSGVVHM GG  ++ AAIV  PR  RFNEDG+ N +PQQS  LQTLGTLILW G       S L + +G + VAAK MV++TI+ + GA   V+L K+    +D+   NNG+LAGLV +TAGC    PE AM+IG ++G +Y   SK+++ L+IDDVVDA PVH F G WGV A  LFAT +NY   Y     +R  +C GAFYG  G  + A +V+ LA++AWV    + LFLGI   +GMRV  + E+ GMD ++HGG+   E +K
Sbjct:   35 IFWLLFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLFGYGVALGDTKGRFIGSNAFALKGSHFEADDG---TLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWGG-GWASAWVD-EDLLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAI-NGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYY---GDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGINAVVGMRVDKEMEQIGMDDSKHGGQTYPEMVK 462          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE)

HSP 1 Score: 446 bits (1148), Expect = 2.900e-142
Identity = 246/473 (52.01%), Postives = 319/473 (67.44%), Query Frame = 1
Query: 1366 CNFLNVTVMQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDD---------------LLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEG---GSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHG-GRKTSEALKKAL-AKAGID--ATAMPSRQPS 2718
            C  L V +MQVGF+MLEVGS+SPKNTKAVLIKN+ DAA+GAICWW LG+GFAYG+ +GGF+G  +FA  GN     DG       G + A W F WAFAAT+AT+VSGA+AER+K+ AY+  S+ I+ +IYP+VVHWVW   GWAS  R  D                LL  CGA DFAG+GVVHM GG C++VAA +  PR +RF  +G  N+MPQQSPALQTLG LILW GWYGFNGGS   V++GRS + A AMV++TI+ +A    + + +K+   K DS  +NNGIL+GLVAI+A   +V PE A IIGAVA   Y +G++ +   RIDDVV A+ VHL  G WG+++VGLF+T + YQ+ Y  G     ER  +CCG  YGCGG++L A ++  L+I  WV  ++ +  L IK ++G+RV L  EE GMDK+RH    + S AL++AL + AG D  +TA  S +PS
Sbjct:   35 CGIL-VFLMQVGFSMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGNDVGGFIGTDSFAFSGNATHQEDG------QGAEIAQWFFEWAFAATAATVVSGAVAERIKIAAYVQLSVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGGMCALVAAKIVGPRTKRFR-NGIPNRMPQQSPALQTLGVLILWVGWYGFNGGSVGSVSNGRSHLVAAAMVNTTISAAASVLSVGLWLKIAYKKVDSGHLNNGILSGLVAISASGSLVQPEGAFIIGAVASAFYMLGTEGLKWFRIDDVVQASAVHLMCGAWGLVSVGLFSTGSRYQDVYSYGIFSDPERDEQCCGLLYGCGGKVLAANVILILSISGWVAALAFLGLLVIKKSVGLRVPLVVEEMGMDKSRHTRSNRNSTALRRALRSAAGKDDRSTAASSHRPS 499          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 1.530e-136
Identity = 228/442 (51.58%), Postives = 293/442 (66.29%), Query Frame = 1
Query: 1336 FACVLLFFCICNFLNVTVMQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGH-------SIGGFMGASAFALRGNQFENPDGGPSTPEN-GYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGG 2637
            F  +L+FF          MQ GFA LEVG V  KN K +L+KNV DA+IGAI W++ GYG A+GH       +  GF+G + + L G+ F + D   +T E  GY+WA WLF WAFAATSATIVSGA+ ER+    Y++Y++ +   IYPIVVH  W+S GW S+ R  D LL  CG +DFAGSGVVHM GG  ++V A++  PR  RF  +G V  +PQ S   Q +GTL LW GWYGFNG S LY+  G+ +VAAK M++ST++ + G     ++ ++L    D +  NNGIL+G VAITAG  V  PE A++IG +AG IY   SKL+L+LRIDDVV+A PVHLF G+WG+ AVGL A PNNY   Y E   +R+  CCGAFYGCGG  LGAQIV+ L  LAW G  S ++F   KYT+G+RVS + EE GMD ++HGG
Sbjct:   36 FGAILVFF----------MQAGFAFLEVGCVQSKNQKNILVKNVFDASIGAIAWYITGYGIAFGHDAYAEDGTTNGFIGTTGYFLAGDHFRSDD---ATDEQLGYEWANWLFQWAFAATSATIVSGAVMERISFGCYLIYAVTLIGFIYPIVVHMTWNSGGWMSAFRQ-DHLLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRFGRFGPNGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSSLYIV-GKGLVAAKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYGRVYYE---DRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGG 459          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 2.380e-130
Identity = 214/416 (51.44%), Postives = 277/416 (66.59%), Query Frame = 1
Query: 1390 MQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGG 2637
            MQ GFA LEVGS+ PKNTKAVL+KN  DAAIGA+ WWL+G+G A+G     F+G + FA      E   G     E   ++A W+  WAFAATS TIVSGAIAERV + AY++Y + I+S+IYP+V HWVW   GWASS R   DLL  CG  DF+GSGVVH+ GG  ++VAA    PR  RF+ +G   ++ +QSPAL  LGTLILW GW+ FN       +  +   AAK+M+++ + PSA   + +++  M    FD  +  NG+L GLVAITA  P+V  E A +IG V+G + F GSKL+L+ +IDDVVDA+ VH   GLWG++A GLF T   Y   Y E   +RA  CCG FYGC G LL A +++ LA +AWVGG +++LFLGIKY++G+RV+   EE GMDKTRHGG
Sbjct:    1 MQFGFAALEVGSIRPKNTKAVLLKNTTDAAIGALVWWLVGHGVAFGEGSN-FIGETQFAFSPELDEERIG-----EVALEYARWMLQWAFAATSTTIVSGAIAERVALHAYLIYGVIITSLIYPVVAHWVWARSGWASSFRADGDLLVGCGVADFSGSGVVHLTGGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSR-QPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTRLGYARAYAE---DRADECCGVFYGCSGSLLAANMIFVLAQVAWVGGTAVVLFLGIKYSLGLRVNTITEEEGMDKTRHGG 406          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 2.480e-129
Identity = 221/441 (50.11%), Postives = 283/441 (64.17%), Query Frame = 1
Query: 1336 FACVLLFFCICNFLNVTVMQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHS-------IGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGG 2637
            F  VL+FF          MQ GFA LEVG V  KN K +LIKNV DA+IGA+ W++ GYG A+G+          GF+G + + L G+ F   D   S  + GY WA WLF WAFAAT ATIVSGA+ ER+    Y++Y++ ++  IYPI+VH  W + GW S+ R  D LL  CG +DFAGSGVVHM GG  ++V A++  PRA RF   G V  +PQ S   Q +GTL LW GWYGFNG S L +T G+ +VAAK M++ST++ + G     ++  ++    D +  NNGIL+G VAIT    VV PE A++IG +AG IY   S L+L+LRIDDVV+A PVHLF G+WG+ AVGL A  +NY   Y E   +RA  CCGAFYGCGG  L AQIV+ L  LAW G  S I+F   KYT+G+RVS + EE GMD ++HGG
Sbjct:   41 FGAVLVFF----------MQSGFAFLEVGCVQRKNQKNILIKNVFDASIGALAWYVAGYGIAFGYDSYVKTGDTNGFIGTTGYFLAGSTFRGGD--VSDEDLGYTWANWLFQWAFAATCATIVSGAVMERISFGCYLIYAVTLTGFIYPIMVHMTWSAGGWMSAFRE-DFLLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRAGRFGPSGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSTLLIT-GKGLVAAKVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYE---DRADICCGAFYGCGGNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKHGG 464          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 8.690e-129
Identity = 227/452 (50.22%), Postives = 284/452 (62.83%), Query Frame = 1
Query: 1390 MQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDD---LLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRH---------------GGRKTS-EALKKALAKAGID 2688
            MQVGFAMLEVGSVS KNTKAVL+KN+GDA++GAICWWL+G+G A+G    GF+G S FAL G +            +G K A W+F+W                                     VVHW W  +GWAS  R  D+   LL  CGA DFAGSGVVHMVGG  ++VAAI  KPR  RF   G   ++PQQSPALQTLGTLILW GWY FN GS + ++ GRSVVAA+A+VS+TI PSAG  ++V+ VKML+ KFD+  VNNGIL+GLVA+T+G P+V PE A +IG ++   Y+  + L+L+L+IDDVVDA PVH+F G+WG++  GLF T   +  TY   G +RA  CCG FYGCG  LL A +    AILAWVG  S+ILF  I+ T+G+RV   +E  GMD TRH               GGR  S +A+ +ALA+A  D
Sbjct:    1 MQVGFAMLEVGSVSSKNTKAVLLKNIGDASLGAICWWLVGFGLAFGEDAHGFIGTSVFALHGGESR-------FGTSGLKEAEWVFDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGVAALVAAIAVKPRKSRFRH-GRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVISVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVIGVISAFFYYASANLLLKLKIDDVVDAAPVHMFCGIWGLIGTGLFTTREGWALTYGAAGGDRADECCGLFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRHNSTSGSFNAGGQGGNGGRNGSLDAVHRALAQANGD 444          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 8.420e-127
Identity = 226/441 (51.25%), Postives = 285/441 (64.63%), Query Frame = 1
Query: 1336 FACVLLFFCICNFLNVTVMQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSI------GGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKF-DSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGG 2637
            F  VL+FF          MQ GFAMLEVG+V  KN K +LIKNV DA++G I W+  GYG A G          GF+G   F L    F       S  + G  WA WLF WAFAAT+ATIVSGA+ ERV   AY+VY++ +   IYP+VVHW W + GWAS+ R T+ LL +CG +DFAGSGVVHM GGT ++V A++  PR+ RF  DG   ++PQ S   QTLGTL LW GWYGFNG S L +  G   VAA+AMV++TIA    AC+  V V   +  + D +  NNG+L GLVAITAGC VV PE A++IG VAG +Y   S L+L+L+IDDVVDA+PVH+F G+WGVLA GL A  +NY E+Y    SER   CCGAFYGCGG    A +++ + +L W G  S ++F   KYT+G+RVS   E+ GMD ++HGG
Sbjct:   33 FGAVLVFF----------MQTGFAMLEVGAVQAKNAKNILIKNVFDASLGGIMWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRG-----SGDDVGINWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETE-LLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRFI-DGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIV-GLGEVAARAMVNTTIAGGV-ACVTSVTVAYFRIGYVDITAANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWGVLAAGLLAEKDNYGESYY---SERQGDCCGAFYGCGGNQFTANLIFVIVVLGWAGFCSFLMFTFAKYTVGLRVSKAIEDAGMDDSKHGG 451          
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 5.230e-126
Identity = 210/417 (50.36%), Postives = 270/417 (64.75%), Query Frame = 1
Query: 1390 MQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIGGFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSGAIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASST-RPTDDLLFECGAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQTLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVVLVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFVGSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSERAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRVSLQEEETGMDKTRHGG 2637
            MQ GFAMLE GSVS KNTK +LIKN+GD+A+GAI WWL G G A+G   GGF+G + FAL+         G   P     +A W+F WAFAA++ TIVSGA+AER    AY+++S  I+S IYPIV HW W   GWAS+     DDLLF CGAI+ AGSGVVHM GG  ++    +  PRA RFNEDGS N MPQQS  LQTLGT ILW GW GFNGGS          VAA+ M  + I+ ++G    +V  K L   +D+    NGILAGLV++TAG     PE A ++G + G +Y   S L+L+L +DDVV+A PVHLF G+WG++A G FA+   Y   Y E   +R+ RC G  YG  G  L A I++ +A++ WVG ++L+LF+  K TIG+RVS ++E  GMD ++HGG
Sbjct:   30 MQAGFAMLEAGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGKDSGGFLGTTGFALKDESMFGTTSGDFVP---LSYAKWIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVS-MPAVAARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSE---DRSGRCAGVLYGGSGSSLAANIIFLMAVVVWVGLLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGG 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig778.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVJ2_9PHAE2.670e-15358.27Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FR22_ECTSI7.890e-15156.11Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
D7G243_ECTSI1.690e-14354.00Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6H5L6H3_9PHAE2.900e-14252.01Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A835ZB85_9STRA1.530e-13651.58Ammonium transporter n=1 Tax=Tribonema minus TaxID... [more]
D7G1Q4_ECTSI2.380e-13051.44Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835ZI90_9STRA2.480e-12950.11Ammonium transporter n=1 Tax=Tribonema minus TaxID... [more]
D8LEG5_ECTSI8.690e-12950.22Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
D7G3S7_ECTSI8.420e-12751.25Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6H5J7X8_9PHAE5.230e-12650.36Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig778contigP-wetherbeei_contig778:2454..8480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FR22
Preferred nameamt-1
PFAMsAmmonium_transp
Model size3222
Max annot lvl2759|Eukaryota
KEGG koko:K03320
KEGG TC1.A.11
Hectar predicted targeting categoryother localisation
Exons10
Evalue3.26e-159
EggNOG OGsCOG0004@1|root,KOG0682@2759|Eukaryota
Descriptionammonium transmembrane transporter activity
Cds size1383
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig778.1.4prot_P-wetherbeei_contig778.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig778 2904..7091 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187000.3738973-UTR-P-wetherbeei_contig778:2453..29031683187000.3738973-UTR-P-wetherbeei_contig778:2453..2903Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig778 2454..2903 -
1683187000.5018387-UTR-P-wetherbeei_contig778:7091..84801683187000.5018387-UTR-P-wetherbeei_contig778:7091..8480Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig778 7092..8480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187000.3851786-CDS-P-wetherbeei_contig778:2903..30771683187000.3851786-CDS-P-wetherbeei_contig778:2903..3077Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 2904..3077 -
1683187000.3946068-CDS-P-wetherbeei_contig778:3379..35361683187000.3946068-CDS-P-wetherbeei_contig778:3379..3536Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 3380..3536 -
1683187000.4044862-CDS-P-wetherbeei_contig778:3939..40791683187000.4044862-CDS-P-wetherbeei_contig778:3939..4079Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 3940..4079 -
1683187000.4151435-CDS-P-wetherbeei_contig778:4410..45631683187000.4151435-CDS-P-wetherbeei_contig778:4410..4563Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 4411..4563 -
1683187000.4241295-CDS-P-wetherbeei_contig778:4971..51071683187000.4241295-CDS-P-wetherbeei_contig778:4971..5107Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 4972..5107 -
1683187000.439577-CDS-P-wetherbeei_contig778:5300..54971683187000.439577-CDS-P-wetherbeei_contig778:5300..5497Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 5301..5497 -
1683187000.449936-CDS-P-wetherbeei_contig778:5838..59901683187000.449936-CDS-P-wetherbeei_contig778:5838..5990Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 5839..5990 -
1683187000.4591606-CDS-P-wetherbeei_contig778:6353..63941683187000.4591606-CDS-P-wetherbeei_contig778:6353..6394Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 6354..6394 -
1683187000.4682574-CDS-P-wetherbeei_contig778:6689..68271683187000.4682574-CDS-P-wetherbeei_contig778:6689..6827Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 6690..6827 -
1683187000.4882588-CDS-P-wetherbeei_contig778:6996..70911683187000.4882588-CDS-P-wetherbeei_contig778:6996..7091Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig778 6997..7091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig778.1.4

>prot_P-wetherbeei_contig778.1.4 ID=prot_P-wetherbeei_contig778.1.4|Name=mRNA_P-wetherbeei_contig778.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=461bp
MQVGFAMLEVGSVSPKNTKAVLIKNVGDAAIGAICWWLLGYGFAYGHSIG
GFMGASAFALRGNQFENPDGGPSTPENGYKWAYWLFNWAFAATSATIVSG
AIAERVKVTAYIVYSIAISSVIYPIVVHWVWDSEGWASSTRPTDDLLFEC
GAIDFAGSGVVHMVGGTCSVVAAIVAKPRARRFNEDGSVNKMPQQSPALQ
TLGTLILWCGWYGFNGGSCLYVTDGRSVVAAKAMVSSTIAPSAGACMLVV
LVKMLQNKFDSSLVNNGILAGLVAITAGCPVVAPEAAMIIGAVAGCIYFV
GSKLILRLRIDDVVDATPVHLFSGLWGVLAVGLFATPNNYQETYPEGGSE
RAHRCCGAFYGCGGRLLGAQIVYALAILAWVGGMSLILFLGIKYTIGMRV
SLQEEETGMDKTRHGGRKTSEALKKALAKAGIDATAMPSRQPSMAGRRPM
SDSSHRGSIS*
back to top

mRNA from alignment at P-wetherbeei_contig778:2454..8480-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig778.1.4 ID=mRNA_P-wetherbeei_contig778.1.4|Name=mRNA_P-wetherbeei_contig778.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=6027bp|location=Sequence derived from alignment at P-wetherbeei_contig778:2454..8480- (Phaeothamnion wetherbeei SAG_119_79)
TGGAGGACGAAAGGCGAAGGGAGGTGTTTTGGAATGAGTACAACACCTAC GCTTGAGAGCCTCCAGGCACAACTCGACGAAATCCAGGTTAGTCTTGTAC TTGCCATTGCTTCGCTTTCCTCGCTTTTTTCTTTAGCAAGAGATCCACCA GTTTAGCGCTCTCTAGAAACTTGGGTTTTCTACAGTGTTACACGTGTCTT GAAGTGTGCAGTTTTCTTTTTTTAATCACGCTTCTCTTCGCCAGGTGCCA CGCACCACCTTGGGTTTGGATTTTTTTCTTCCTCATTTTTCCTCCGTCTT GCGGTTGTGTCATGCTTTTATTCGTGCGAAATGCCTGATTGAAATAGTGG GAGAACCCAGGACGGCTGTGTCCCTTGGTTTCGAGCACAGCCGGGCAGTG TGTGGGAAAATACGGAAATGCAGAAAAGAGGCTCTTCCACCGACCACCTT CAGTGCCACTATTCGCTTCTACCTGACGCTTCTAAACACCAGTAGGCGGT GCCCGTGATTTGGTTTCGATGCGGTGCCTATCTGTTGGCGGCGCCGACCC ACGAAACCCGGTCCTGAGCGTCTGAATGTCTGACACGTGAAAAGTGGAAG GGTTTACATGGTTAACTAAAGGTGTTTCTGGACGAATCACATTCAATGAT TCCCGAGAAAGGCAAACCCTTGTCCCTAGCGGCATAAACTAAGCTCCTTA ACATCCCCTCCCCTGCCGTATTGCAATCGCTCGCGGCGCTTGCCGTCTTC CCGACCTCGCGTGCTTGACCGGTCTCGCGTCGCGCCGCGCCGCGCGACAG AGCACTTATGTAGCCGCTGTCGACGTCGACACGTTCTGGCTGCTAATCAC TGCGGTCCTTGTCTTCTGTGAGTTAGGATGCTTAGGATGATGATGGAGTG ATGGCGGTTGCTCTCCGCTTCCCCCGTTCCCTCCTTCCCGTTCTCTCTTT CAGCTGTTTTTCCCGTTGCGGCCTTGGCTCACAGGTTTCGCAGCGCGCAG GGCGGCTGCTGCATCACTGTTGGGTGCCATTTCCATTGTAGCCGCGAGCG GAGCGGTCGAATGCACTCGCTGATTGGAAGTCTCTTAAGTATCTGTCTTT AATTCAGTCTCGGGTTGCGGTTTTGCAGAGGCTTCGACTCTGTGGCGAAC GGGGACTGGTGATCTTCATCCCTGCTAAGCTGCCAAAACAACTGTCGAAT GGCCGTGTCAGCAGGTCAGGGCAAATCTGCCCACCCTTCTCAGTGTCTTG CATTATCGCTTCGCCAGTCGCACTGATTTCCACTGCTTTTTGGGGTCCAA CTTCAATTCTGTCTTAACACGTAATACCCCCTGCCTTTGCATGTGTTTTG CTATTTTTCTGTATTTGCAATTTCCTGAATGTAACAGTCATGCAAGTCGG GTTTGCCATGCTCGAGGTCGGCTCCGTATCGCCGAAGAACACCAAGGCGG TGCTCATCAAGAACGTCGGAGACGCCGCCATTGGGTGAGGCTGCCCGGCC GTTGCTCGCTAATACTCAACTGACTCGCTGCTGCCACTGGTCTGTCTTCC CCAGCTCATGTTCGTCTCACTTGGCCGCTCCCTCTCATCTCCTGCGTGCT GCACTCGCCCGCCTGTCGGCTGGCTCGCCGGCCGGCTTTGCATGCCTGCG CAGGGCGATTTGCTGGTGGCTGCTAGGGTACGGCTTCGCGTATGGGCACT CCATCGGCGGCTTCATGGGGGCGTCCGCCTTCGCGCTGCGGGGTAACCAG TTCGAGAACCCCGACGGCGGCCCGTCGACTCCCGAGAACGGGTGAGCCGC AGTCGCTGGAGCATTGGCCCTGATGGCATTTTTTTCTGCTCCGAAAGGGC CCTAAAACCTGTTGCAGTTTCGTCACCTGCTCTTGTCTCTTTACGCGTAA ACTAGAGGTATACGAGCCTCTCACTGGCACGCTTTGGCCGTCGCCAATGC TACTGCGGTTAGTTCGGCGATGCGTATTTTTGCACCAACATCGGAAGGGG CATGCCTCCACCCACACGGCCACCCACGTTCCCGTCTTTTCCTGTGAAAA CGCTGCTATCAACGCTACCTACCTCCTGTCCACCAGGTACAAATGGGCGT ACTGGCTCTTTAACTGGGCGTTTGCAGGTAACTACCTGACACTGTGTCGC TGTGTTGATGCCCGGAAATTCAGCCACTTCGCATCTGCTTTTGGCTTTGG CCGGTGCGGTTCCATTTCTGATTCAGTTTTGCCGAGCTCTGCATTGGGGG CATTCGAGCGGTTGGGGAGAGTAACAGTTCGGGATGCCTTCTGAAGTAAA AGGTCGATCTTGCGTCGAAAGGGCAACCGCAGGGCCCTTTTTCGATGCTT CCTCTTCCGTTCCGACACCCGCTTCAATCCTTTTCCCACACCGACTTCGA ATCGATTTGGCCAAACCGGGGAACGGCAATGAAATGGAATACGAAACGGC TGCAACCACTGCTGTCGCTGCCTGCCATTCCTGGCCACAGCGACGAGCGC GACGATCGTGTCGGGCGCCATCGCGGAGCGCGTCAAGGTGACGGCCTACA TTGTGTATTCCATTGCCATCAGCTCCGTCATTTACCCCATCGTCGTGCAC TGGGTCTGGGACAGCGAGGGCTGGGCCAGCTCCACCCGCCCGGTGAGTCT GGAATTAAGCATAGGCCAGTTCGCCGCGCTGCACGTTCGCTGGCTCGTTT TCTGCCTCCCATCTCCTTGTGGTGCCGTCTCCGCCTTGCTGTTGTGGCCG CCGTTCCGGTCCATATCCTTCGTGCTGCCTTGTTTGCCGCGCTCTTTGTT GTTGCGGTTAAAAAAATGAGTGGGGAGCGCTGCATCTGAAACGGTGTGCC TTGCAGGGCCGGAATATCGATAGCATTGGCATCTCACACCTTCTCGCACG CGAATGTCGTTCCCGCTGCCGCCGCCATTGCGCCCGAAAAATATCGGTCG GAAACCGCTGCCAAAAAACAACACATAAGCCAGACGGACGACCTGCTGTT CGAGTGCGGTGCGATCGATTTCGCGGGGTCGGGCGTGGTGCACATGGTGG GCGGCACGTGCTCGGTGGTGGCGGCCATCGTCGCCAAGCCGCGCGCCCGC CGCTTTAACGAGGACGGCTCAGTCAACAAAATGCCGCAGCAGTCGCCCGC GCTGCAGACCCTCGGGACGCTCATCCTCTGGTGAATGGTTCTTGAACGTC CCCGGAAGGAGGTTGAAAGCGTTTACAACAGTCTTTGTTGCAGGGAGATC TCGGCTTTCCCACTTTAGTTCTCCCACCTGAGGTTTCGGTGCAGCCTGTT CCATTCTCCCTCTCAATCTCCTTCTCCTATGGCTATTCCCAATCCGATTT ATCAAATCTTGCAACTGGCACAGGTGCGGATGGTACGGGTTCAACGGCGG GTCGTGCCTGTACGTGACCGACGGGCGGAGCGTGGTGGCCGCCAAGGCCA TGGTGTCGTCGACCATAGCCCCCTCGGCGGGCGCGTGTATGCTAGTCGTC CTCGTCAAGGTAAGACGACGCTGGCGAAAGAAGCGCCCCTCGCGCAGCTT TTTGCTGCCGAGCGAAGTGCACTGGCAGATGAACGAACGAAGTGCTGTGT TGCGTCTCGGCCGGTGTGGTTTGCGATGTTCCGTTCGGCATTCCCGTGGA GTAAGGTTCTGCGCGTTCTGCTTTTTGCGGGGTGGCGGAGCGTGGCTTTG GTTTCTGCTGGAAGTTGCCGCAATGTACCGTGCATCGTCTGTGAGCGGAA CATTGCCGCCCGCAAATACCCTAAAAATGGGAATGCCGGTCGGAGGAACC GTTTCTGCGATTCCTTGTCCCTTTCTATCCGCCCTTTTTTGCCATGTCGA CGTGACACGAAAAGTGCCGATGACGGCGACGCAAAATTGCCGAAACAACC CCTCCCCACCCGTGCAGATGCTGCAAAATAAGTTTGATTCGAGCCTGGTC AACAATGGCATCCTGGCGGGCCTCGTGGCCATCACGGCCGGCTGCCCTGT TGTGGCGCCCGAGGCAGCCATGATAATCGGCGCCGTGGCCGGATGCATTT ACTTCGTGGGGTCGAAGCTGGTGAGCGAAGCGGTCGATTCGGCGATCTGG CTAGGGGCTTCCAGATTTGATGTCAGCGGATGTTAGTAGCGGGCGGCCTT CAGCCTCCCCAGGGATCATTGGCGCGGCGGCGACTCGGGCTCTCAGCTTG GACCGGGTGACAGACAGCGTGCCATCATCTCGATCACGTCCGGTGTCTTC TAACTCTGTCGCTGCCGTGGTCGAGCTGCCGGCCTCTCTATTTTTCCAAT GACGGCCCTCCTTTTTTCCCTCTTTGCCACGTGTCTTGCGACACGCCGAA TCTTTCCGAAACGAAATCTCCGGCACTCTTTTCTCGTCTTTTTCCCGCCA GATCCTGCGGCTGCGGATCGACGACGTTGTGGACGCGACGCCGGTGCACC TCTTCAGCGGGCTGTGGGGCGTGCTGGCAGTTGGGCTCTTCGCCACGCCC AACAACTACCAGGAGACATACCCAGAGGGCGGCAGCGAACGGTGAGTGCT GCGGGAGGCAGCTGGCTGGTGGCGGCGGGGGCGGCAGCGGCGGCAGCAGC GGCGACTAGCAGTGTTGGCGGCGCTGGCGGTGGCGGCGAACGGCAGCTTT GGTGGGTCGCGGTTGGCCGGCAGCAGGCAACGGCTGGTGTGCAGCAGCTC TTGATAGAGCTGCCGTGACATGTCAGACCACTCTGTTTTTCCCCTGTCTG GAGGGATTGCAGGTATTTCTTTTTTTACACACACTCAGTCGCCCCGCTCT GCTCTGGTCTACGTGGCTTGCTCGTCGCATGGAACAAAGCACCTTCCCTG AGATTTTCCCTCTGCTGAGACACGCATACGTTCCATCGCTGCTCCCCATT CCTTCTTCTGCCTCTCTTGGCCTCAACTCGGGTGGGCTCGGCAGGGCGCA TCGATGCTGCGGGGCTTTCTACGGCTGCGGGGGGCGATTACTCGGCGCCC AAATCGTGTACGCGCTGGCGATTCTCGCGTGGGTGGGCGGCATGTCGTTA ATTCTCTTCCTCGGCATCAAATACACCATCGGGATGCGCGTCTCTCTACA GGTGACGCGTCGCCGCTCAAATTTCCGCTGCCGCCACCGCCGCCTCCGCC GCCTCCAGCGCTGCTGTCGCTGCTGCCAACGCCGCGGCCGCTGTGCTGGA TGGTTACTCGCTGCCGCTTGGTGGAAGAGTCCGAAATATAATCGACAGTT ATCACTTTTGCTTCATCTTTGTAGTTCGGCACGCCGGGCGCTCCGCTGAC CGGCTCCGATTAGTAACAATTTCTGAGGAACACGCATTCTCCTTCGCTTG TGTTTCCATCGCCTGTTCCGCTCGCCCTTGTCTCGTCAAACTCATCGGCG CAGGAAGAGGAGACCGGGATGGACAAAACCCGGCACGGAGGGCGCAAGAC GTCCGAGGCGCTCAAAAAGGCACTGGCGAAGGCCGGCATCGACGCCACGG CCATGCCGTCGCGGCAGCCGAGCATGGCGGGCAGAAGGCCCATGTCGGAC AGCTCCCACAGAGGGAGCATCAGCTAGCAGTAGGAGAACCAGCTGACCGC TGGAGGACAGCGGGCTTGAAAGTTTTGGGTGACACGGCGACGGTGGCGGC GGCTCGGGAGGGCGGTGGCGGCGGCGGCGGCAGCAGGAATGCTGTCATCG GCAGGAAAGCGGCGGGTGGGATTGGTGTTGCGCCTTCCAAATGTGTTTGT GGCTCTTGGCTGCCGGGGCTTCCTGAGCGAGCGATAGAGCGTGTGAAGGA AAGACTTCCTTGATCACTTTTTATACCCATGCACCCTGCCGGTGTGGGGT TGTCCCATAGAGAGAATAGCGCTAGATTGGTCTACTGCCAGTAATGCGCA GCGGACATGCAACCGGCAATCGCTGGTCCAATGTTGTTTCTTTAAGGAAG ATGGCACTACGGGGCACAGAACGTGTAGAGAAACGCATGCAAATAGTTAT TCAGTATATACATTTCCTCCCGAACTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig778:2454..8480-

>mRNA_P-wetherbeei_contig778.1.4 ID=mRNA_P-wetherbeei_contig778.1.4|Name=mRNA_P-wetherbeei_contig778.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1383bp|location=Sequence derived from alignment at P-wetherbeei_contig778:2454..8480- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAGTCGGGTTTGCCATGCTCGAGGTCGGCTCCGTATCGCCGAAGAA
CACCAAGGCGGTGCTCATCAAGAACGTCGGAGACGCCGCCATTGGGGCGA
TTTGCTGGTGGCTGCTAGGGTACGGCTTCGCGTATGGGCACTCCATCGGC
GGCTTCATGGGGGCGTCCGCCTTCGCGCTGCGGGGTAACCAGTTCGAGAA
CCCCGACGGCGGCCCGTCGACTCCCGAGAACGGGTACAAATGGGCGTACT
GGCTCTTTAACTGGGCGTTTGCAGCGACGAGCGCGACGATCGTGTCGGGC
GCCATCGCGGAGCGCGTCAAGGTGACGGCCTACATTGTGTATTCCATTGC
CATCAGCTCCGTCATTTACCCCATCGTCGTGCACTGGGTCTGGGACAGCG
AGGGCTGGGCCAGCTCCACCCGCCCGACGGACGACCTGCTGTTCGAGTGC
GGTGCGATCGATTTCGCGGGGTCGGGCGTGGTGCACATGGTGGGCGGCAC
GTGCTCGGTGGTGGCGGCCATCGTCGCCAAGCCGCGCGCCCGCCGCTTTA
ACGAGGACGGCTCAGTCAACAAAATGCCGCAGCAGTCGCCCGCGCTGCAG
ACCCTCGGGACGCTCATCCTCTGGTGCGGATGGTACGGGTTCAACGGCGG
GTCGTGCCTGTACGTGACCGACGGGCGGAGCGTGGTGGCCGCCAAGGCCA
TGGTGTCGTCGACCATAGCCCCCTCGGCGGGCGCGTGTATGCTAGTCGTC
CTCGTCAAGATGCTGCAAAATAAGTTTGATTCGAGCCTGGTCAACAATGG
CATCCTGGCGGGCCTCGTGGCCATCACGGCCGGCTGCCCTGTTGTGGCGC
CCGAGGCAGCCATGATAATCGGCGCCGTGGCCGGATGCATTTACTTCGTG
GGGTCGAAGCTGATCCTGCGGCTGCGGATCGACGACGTTGTGGACGCGAC
GCCGGTGCACCTCTTCAGCGGGCTGTGGGGCGTGCTGGCAGTTGGGCTCT
TCGCCACGCCCAACAACTACCAGGAGACATACCCAGAGGGCGGCAGCGAA
CGGGCGCATCGATGCTGCGGGGCTTTCTACGGCTGCGGGGGGCGATTACT
CGGCGCCCAAATCGTGTACGCGCTGGCGATTCTCGCGTGGGTGGGCGGCA
TGTCGTTAATTCTCTTCCTCGGCATCAAATACACCATCGGGATGCGCGTC
TCTCTACAGGAAGAGGAGACCGGGATGGACAAAACCCGGCACGGAGGGCG
CAAGACGTCCGAGGCGCTCAAAAAGGCACTGGCGAAGGCCGGCATCGACG
CCACGGCCATGCCGTCGCGGCAGCCGAGCATGGCGGGCAGAAGGCCCATG
TCGGACAGCTCCCACAGAGGGAGCATCAGCTAG
back to top