mRNA_P-wetherbeei_contig7772.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7772.1.1
Unique NamemRNA_P-wetherbeei_contig7772.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: F0YG95_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG95_AURAN)

HSP 1 Score: 115 bits (287), Expect = 1.220e-26
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 1
Query:   16 ERLVIAWAMIRGLGAIFVEGTFVIFN---TYIEDHASI---WPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLLALVVCFVGTEVHAGFSNTAKVASPAAFWLGWVPVAVGRFAVPLLVLSFNVRHIYR 477
            ER  I WA+  GL  IF++GTF IF+    +  D   +   W   LW  WGKVDARY  SD ++       AL  GPA L++AWA + R+ +RH  GI +++  +  +V +V TE HAGF + A       FW+ ++  ++ RF +PL VL+ +++ + R
Sbjct:  766 ERGAICWALFTGLVHIFMDGTFAIFSHLVRFTNDRGRLQRPWFVELWHLWGKVDARYRRSDSFIVVQVGAMALVAGPACLVFAWATFERKVYRHALGILIATAQVWTLVLYVATEAHAGFQDCAPRDDFLFFWVLFILTSIIRFLLPLPVLAGSIKGMLR 925          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: A0A2N3NC35_9PEZI (EXPERA domain-containing protein n=1 Tax=Lomentospora prolificans TaxID=41688 RepID=A0A2N3NC35_9PEZI)

HSP 1 Score: 63.9 bits (154), Expect = 3.620e-9
Identity = 45/158 (28.48%), Postives = 70/158 (44.30%), Query Frame = 1
Query:    1 RPTRGERLVIAWAMIRGLGAIFVEGTFVIFNTYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLLALVVCFVGTEVHAGF---SNTAKVASPAAFWLGWVPVAVGRFAVPLLVLSFNVR 465
            R +  ERL+++W  I G    F EG FV  +  +    +++   LW  +   D+RY+TSDP++ ++E  T L  GP     AW        RH   + +    L  VV +  T     +   SN         FWL +V   +    VP L+L  ++R
Sbjct:   56 RLSLNERLIVSWYCICGFLHCFFEGYFVYNHATLAGQQTLFAQ-LWKEYSLSDSRYLTSDPFMISVETITVLVWGPLCFFSAWCIIRDSTIRHPVQMMVCMGHLYGVVLYFATSTAEQYYHGSNGHSRPEFQYFWLYYVGFNLPWVIVPALLLLRSIR 212          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: A0A084G2J5_PSEDA (EXPERA domain-containing protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084G2J5_PSEDA)

HSP 1 Score: 61.2 bits (147), Expect = 5.960e-8
Identity = 40/152 (26.32%), Postives = 68/152 (44.74%), Query Frame = 1
Query:   16 ERLVIAWAMIRGLGAIFVEGTFVIFNTYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLLALVVCFVGTEVHAGFSNTAKVASPAA--FWLGWVPVAVGRFAVPLLVLSFNVR 465
            ERL+++W  I G    F EG FV+ +  +    +++   LW  +   D+RY+TSDP++ ++E  T L  GP     AW        R+   + +    L  V+ +  T     +      + P    FWL +V   +    VP  +L  ++R
Sbjct:  227 ERLIVSWYSICGFLHCFFEGYFVLNHANLASQQTLFAQ-LWKEYSLSDSRYLTSDPFMLSVETITVLVWGPLCFFSAWCIIRESTIRYPVQMMVCMGHLYGVILYYATSAAEQYYRGNSHSRPEFQYFWLYYVGFNLPWVIVPSFLLLRSIR 377          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: A0A1Y2EE44_9PEZI (Emopamil binding protein-domain-containing protein n=1 Tax=Pseudomassariella vexata TaxID=1141098 RepID=A0A1Y2EE44_9PEZI)

HSP 1 Score: 57.0 bits (136), Expect = 1.230e-6
Identity = 41/163 (25.15%), Postives = 74/163 (45.40%), Query Frame = 1
Query:    7 TRGERLVIAWAMIRGLGAIFVEGTFVIFNTYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLLALVVCFVGTE-VHAGFSNTAKVASPAA-FWLGWVPVAVGRFAVPLLVLSFNVRHIYRRVAV 489
            T+    V  W ++ G   +F EG FV+ +T +     ++   LW  +   D+RY+TSDP++ ++E+ T    GP     A    T    RH   I +    L  V  +  T  +   FS  +        FW+ +V + +    +P ++L  ++R I R++ +
Sbjct:   83 TKSSLAVFCWFVLCGSLHVFFEGYFVLNHTSVASSQHLFAQ-LWKEYALSDSRYLTSDPFMLSVESITVFVWGPLCFACAVCIVTDSYLRHPLQIIMCIGHLYGVALYYATSLIETHFSGRSHSRPEFLYFWVYYVGLNLPWAIIPTILLGGSIRTIARKLKI 244          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: UPI001D8718E9 (Emopamil binding protein-domain-containing protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D8718E9)

HSP 1 Score: 55.8 bits (133), Expect = 2.880e-6
Identity = 41/161 (25.47%), Postives = 72/161 (44.72%), Query Frame = 1
Query:    7 TRGERLVIAWAMIRGLGAIFVEGTFVIFNTYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLLALVVCFVGTEVHAGFSNTAKVASPAA--FWLGWVPVAVGRFAVPLLVLSFNVRHIYRRV 483
            +R +  V  W ++ G    F EG FV  +  +    +++   LW  +   D+RY+TSDP++ ++E+ T    GP   L A +       RH   I +    L  V  +  T +   +      + P    FW+ +V        VP L+L+ ++R I R++
Sbjct:   62 SRTQLAVFGWFVLCGSLHCFFEGYFVFNHATVASSQNLFAQ-LWKEYALSDSRYLTSDPFMLSVESITVFLWGPLSYLCALSIVKEPYLRHPLQIIMCMAHLYGVALYYSTSLVETYFTGRAHSRPEFLYFWVYYVGFNAPWVVVPALLLADSLRTITRKL 221          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: UPI0018F2C186 (emopamil-binding protein-like n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F2C186)

HSP 1 Score: 55.1 bits (131), Expect = 3.270e-6
Identity = 32/107 (29.91%), Postives = 51/107 (47.66%), Query Frame = 1
Query:    1 RPTRGERLVIAWAMIRGLGAIFVEGTFVIFN---TYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLL 312
            R    +R  + W     L  + +EG FV  +   T  E  + +    LW  +GK DAR+++SDP + ++E  TA+  G   L+  +A    + +RH   I L  C L
Sbjct:   27 RAAAADRWALTWLCYDALVHLTLEGPFVYISLTGTVAESDSIL--ASLWKEYGKADARWLSSDPTIVSLELLTAVLDGILALMLIYAIVKEKYYRHFLQITLCVCEL 131          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: D8SGJ8_SELML (Sterol 8,7-isomerase n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SGJ8_SELML)

HSP 1 Score: 53.9 bits (128), Expect = 1.200e-5
Identity = 31/108 (28.70%), Postives = 54/108 (50.00%), Query Frame = 1
Query:   16 ERLVIAWAMIRGLGAIFVEGTFVIFNTYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLLALVVCFVGT 339
            ER ++ W  + GL  + +EG FV    + +     +   +   + K D+RY   DP + T+EA TA+F+GPA LL  +A    + +++   + +S   L     + GT
Sbjct:   73 ERCLMCWWAVTGLIHVVLEGYFVFTPDFYKKKEIHYLAEVCKEYNKGDSRYAARDPAIVTVEAITAVFVGPASLLCVFAIAKEKFYQYPLQLVVSIAQLYGDTVYYGT 180          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: A0A6I8P1B1_ORNAN (EXPERA domain-containing protein n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8P1B1_ORNAN)

HSP 1 Score: 54.3 bits (129), Expect = 1.280e-5
Identity = 31/102 (30.39%), Postives = 50/102 (49.02%), Query Frame = 1
Query:   16 ERLVIAWAMIRGLGAIFVEGTFVIFN---TYIEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLSSCLL 312
            +R  + W     L  + +EG FV  +   T  E  + +    LW  +GK DAR+++SDP + ++E  TA+  G   L+  +A    + +RH   I L  C L
Sbjct:  145 DRWALTWLCYDALVHLTLEGPFVYISLTGTVAESDSIL--ASLWKEYGKADARWLSSDPTIVSLELLTAVLDGILALMLIYAIVKEKYYRHFLQIALCVCEL 244          
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Match: UPI0014028C0D (emopamil-binding protein-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014028C0D)

HSP 1 Score: 51.6 bits (122), Expect = 3.010e-5
Identity = 29/89 (32.58%), Postives = 47/89 (52.81%), Query Frame = 1
Query:   16 ERLVIAWAMIRGLGAIFVEGTFVIFNTY--IEDHASIWPTGLWVAWGKVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFR 276
            ER V+AW +   +  I +EG FV  +    + +  S+  + LW  +G+VD+R++ SDP V  +E  T    GP  LL  +A    + +R
Sbjct:   60 ERWVVAWLLYDAVVHITLEGPFVCISLVRSLAESDSV-HSMLWKEYGRVDSRWLHSDPTVVALEILTVAVAGPLALLLVFAIVQNKHYR 147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7772.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
F0YG95_AURAN1.220e-2637.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2N3NC35_9PEZI3.620e-928.48EXPERA domain-containing protein n=1 Tax=Lomentosp... [more]
A0A084G2J5_PSEDA5.960e-826.32EXPERA domain-containing protein n=1 Tax=Pseudalle... [more]
A0A1Y2EE44_9PEZI1.230e-625.15Emopamil binding protein-domain-containing protein... [more]
UPI001D8718E92.880e-625.47Emopamil binding protein-domain-containing protein... [more]
UPI0018F2C1863.270e-629.91emopamil-binding protein-like n=1 Tax=Tachyglossus... [more]
D8SGJ8_SELML1.200e-528.70Sterol 8,7-isomerase n=4 Tax=Selaginella moellendo... [more]
A0A6I8P1B1_ORNAN1.280e-530.39EXPERA domain-containing protein n=2 Tax=Ornithorh... [more]
UPI0014028C0D3.010e-532.58emopamil-binding protein-like n=1 Tax=Petromyzon m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7772contigP-wetherbeei_contig7772:1437..2161 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009039402.1
PFAMsCRAL_TRIO,EBP
Model size495
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons2
Evalue2e-27
EggNOG OGsKOG4826@1|root,KOG4826@2759|Eukaryota
Ec32 ortholog descriptionCRAL-TRIO domain protein
Ec32 orthologEc-21_004980.1
Descriptioncholestenol delta-isomerase activity
Cds size495
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187000.084305-CDS-P-wetherbeei_contig7772:1436..15891683187000.084305-CDS-P-wetherbeei_contig7772:1436..1589Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7772 1437..1589 +
1683187000.0992448-CDS-P-wetherbeei_contig7772:1819..21611683187000.0992448-CDS-P-wetherbeei_contig7772:1819..2161Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7772 1820..2161 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7772.1.1prot_P-wetherbeei_contig7772.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7772 1437..2161 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7772.1.1

>prot_P-wetherbeei_contig7772.1.1 ID=prot_P-wetherbeei_contig7772.1.1|Name=mRNA_P-wetherbeei_contig7772.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
RPTRGERLVIAWAMIRGLGAIFVEGTFVIFNTYIEDHASIWPTGLWVAWG
KVDARYVTSDPYVTTMEATTALFLGPALLLYAWAAYTRRRFRHIAGIGLS
SCLLALVVCFVGTEVHAGFSNTAKVASPAAFWLGWVPVAVGRFAVPLLVL
SFNVRHIYRRVAVAE
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mRNA from alignment at P-wetherbeei_contig7772:1437..2161+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7772.1.1 ID=mRNA_P-wetherbeei_contig7772.1.1|Name=mRNA_P-wetherbeei_contig7772.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=725bp|location=Sequence derived from alignment at P-wetherbeei_contig7772:1437..2161+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCCGACGCGCGGGGAGCGGTTGGTGATCGCGTGGGCGATGATCCGTGG CCTCGGTGCCATCTTTGTGGAGGGCACGTTTGTCATCTTCAACACGTACA TTGAGGACCACGCGTCAATCTGGCCGACGGGCCTTTGGGTAGCGTGGGGC AAGGTACGCCAGCCAGGAAGCCAGGGTAGGACGACGGCTATCGTCAGATT ACCATTTCTTTCAGTTGGCCGACCGTATCTATCGTCTCATTGTGGGGGCT TCCTTTTCTGTTGTCGGTTTCGTAGCTTTGAACGGTCCGCTGCTCTGTTG AAGAGTCAAAAGTGTCCCTGTTGCCACGTCTGCTTATGGTTTCACGACCC CCCCCCCCCCAAAAACAAAACCCCGAAATTAAGGTGGATGCACGCTACGT GACGAGCGACCCCTACGTCACCACAATGGAGGCCACCACGGCCCTCTTCC TGGGGCCGGCTCTCCTCCTCTATGCCTGGGCCGCCTACACTCGCCGCCGC TTCCGCCACATCGCTGGCATCGGCCTGTCTTCCTGCCTTTTGGCCCTCGT CGTCTGCTTCGTGGGCACAGAAGTGCACGCCGGCTTTTCCAACACTGCGA AAGTGGCATCCCCCGCTGCGTTCTGGCTGGGGTGGGTCCCGGTCGCCGTC GGACGCTTTGCGGTCCCTTTGCTCGTGCTCTCCTTCAATGTGCGGCACAT CTACCGCCGCGTCGCCGTCGCCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7772:1437..2161+

>mRNA_P-wetherbeei_contig7772.1.1 ID=mRNA_P-wetherbeei_contig7772.1.1|Name=mRNA_P-wetherbeei_contig7772.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig7772:1437..2161+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCCGACGCGCGGGGAGCGGTTGGTGATCGCGTGGGCGATGATCCGTGG
CCTCGGTGCCATCTTTGTGGAGGGCACGTTTGTCATCTTCAACACGTACA
TTGAGGACCACGCGTCAATCTGGCCGACGGGCCTTTGGGTAGCGTGGGGC
AAGGTGGATGCACGCTACGTGACGAGCGACCCCTACGTCACCACAATGGA
GGCCACCACGGCCCTCTTCCTGGGGCCGGCTCTCCTCCTCTATGCCTGGG
CCGCCTACACTCGCCGCCGCTTCCGCCACATCGCTGGCATCGGCCTGTCT
TCCTGCCTTTTGGCCCTCGTCGTCTGCTTCGTGGGCACAGAAGTGCACGC
CGGCTTTTCCAACACTGCGAAAGTGGCATCCCCCGCTGCGTTCTGGCTGG
GGTGGGTCCCGGTCGCCGTCGGACGCTTTGCGGTCCCTTTGCTCGTGCTC
TCCTTCAATGTGCGGCACATCTACCGCCGCGTCGCCGTCGCCGAG
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