mRNA_P-wetherbeei_contig7769.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 206 bits (524), Expect = 8.020e-57 Identity = 104/183 (56.83%), Postives = 138/183 (75.41%), Query Frame = 1
Query: 247 EELARHTLRLLDSDQ----DERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEVNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATHAMTV 783
++LA T+ LLD D D ITR++F ++V IYQQR+SLALTLKDYE+IL KLGY+IS F+ +F++LWI Q+++ LG++WVS ++AFSFLFGSSA NF ESC+FIFVTRAYDV DRV +D++ +E N +V+++N+L+TVFRRWD L NQ +AKREIRN RRSG MT+
Sbjct: 851 KQLAVKTMALLDGDTAVACDAEITRHKFQNAMVTIYQQRRSLALTLKDYESILIKLGYVISLVWSFIALFVFLWIFDQNILGLGVTWVSLVVAFSFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTL 1033
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A835YTT2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.280e-54 Identity = 103/182 (56.59%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 253 LARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIIS-GFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEVNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATHAMTVGTRK 795
LAR TL LLD++ D IT +EFV +IV +YQ+R+SL+L+L+DYE IL KL Y++S GF +FLL F+ LWI GQ V+ LG+SWVS L+A SF+F +SAQ CES +FIFVTR +DV D V FRDDMG + +V ++NLLSTV +RWD Q + N+ +A REIRN RRSGP ++ +TV R+
Sbjct: 383 LARKTLELLDANADATITEDEFVSAIVRVYQKRRSLSLSLQDYEIILRKLSYMLSVGFAVFLL-FVCLWIFGQGVVGLGVSWVSLLLAGSFVFSTSAQGLCESFVFIFVTRPFDVGDGVHFRDDMGQDNVFVVHRINLLSTVLKRWDGQYVVWPNRFLALREIRNMRRSGPQSNTLTVFVRR 563
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE) HSP 1 Score: 160 bits (405), Expect = 6.330e-41 Identity = 88/173 (50.87%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 253 LARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEVNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATH 771
+A + L + + +TR EFV+ V+I+ QR+SL LTL DYEAIL K+GY++S ++ F+ L ILG D+ SL ++W+S +AFSFLFGSSA F ES +F+FVT+AYDV D V F DD G E IV ++N+L+TVFRRWD Q +AN MAK+ IRNQ RS H
Sbjct: 728 IALKMMELFEVPPEGVVTRKEFVDRTVDIFVQRRSLQLTLGDYEAILKKVGYLLSVVSAVVVFFVALRILGYDIGSLVLTWLSLAVAFSFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLH 900
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 142 bits (357), Expect = 1.650e-34 Identity = 86/202 (42.57%), Postives = 124/202 (61.39%), Query Frame = 1
Query: 220 KEAPAPLPPEELARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDM---GNE-VNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATH------AMTVGTRK 795
+E P+ E++ + D D + IT+ E V +V+ ++ +SLA TL D E I KLG II +LF+L F+WL ILG DV+SL +++ SFLIAFSF+ G++A N + +FIFV+R YDV DRV DD+ G E +NV+V KV+L +T FRRWD Q+ Y+ N +A++ I N +R+ H A T +RK
Sbjct: 873 RETLCPMLEEQVLEMAFTIFDMDNNGSITKAEMVLGVVDTFKDHRSLAHTLHDSEHIARKLGLIIFWLILFILAFVWLSILGFDVLSLSVTFASFLIAFSFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRK 1074
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI) HSP 1 Score: 135 bits (339), Expect = 4.090e-32 Identity = 77/182 (42.31%), Postives = 111/182 (60.99%), Query Frame = 1
Query: 250 ELARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMF---RDDMGNE-VNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATHAMTV 783
EL ++ D D +T+ E V +V ++ +SLA TL+D E I KLG II +LF+L F+WL I G DV+SL +++ SFLIAFSF+ G++A N + +FIFV+R YDV DRV + G E NV V KV+L++TVF+RWD Q+ Y+ N +A + I N +R+ H +
Sbjct: 850 ELLDVAFKIFDLDNSGTVTKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMI 1031
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.220e-30 Identity = 73/180 (40.56%), Postives = 112/180 (62.22%), Query Frame = 1
Query: 253 LARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEV--NVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATHAMTVG 786
L H L D +Q +T+++ ++ +V+IY+ K+LA TL D + +++KLG II + F+++FIWL I G +S+ I++ SFL++F+F+FGS+A ES IF+FVT AYDV DR+M D M V K+NLL+TVF R D Q L + N+ +++ + N +RSG VG
Sbjct: 694 LRPHAFALFDKEQHGVVTKDDLLQGVVSIYKDHKNLARTLADSQQMVNKLGQIIGALMSFVMIFIWLSIWGYQFLSISITFSSFLLSFTFMFGSTATALVESIIFVFVTSAYDVGDRLMIPDIMQTSRYHGCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVG 873
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A6H5JDS1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS1_9PHAE) HSP 1 Score: 123 bits (309), Expect = 3.980e-28 Identity = 71/153 (46.41%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 250 ELARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMF---RDDMGNE-VNVIVEKVNLLSTVFRRWDSQ 696
EL ++ D D IT+ E V +V ++ +SLA TL+D E I KLG II +LF+L F+WL I G DV+SL +++ SFLIAFSF+ G++A N + +FIFV+R YDV DRV + G E NV V KV+L++TVF+RWD Q
Sbjct: 898 ELLDVAFKIFDLDNSGTITKEEMVLGVVGTFKDHRSLAHTLQDSEHIAQKLGLIIMCVILFILFFVWLSIWGADVVSLSVTFASFLIAFSFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYSGSNTRGEEPTNVTVVKVDLMTTVFKRWDEQ 1050
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A0D2U9P5_CAPO3 (EF-hand domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9P5_CAPO3) HSP 1 Score: 122 bits (307), Expect = 7.210e-28 Identity = 66/169 (39.05%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 250 ELARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEVNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRS 756
++A +L D D D +IT+ E E+++NIY++RK+LA L D + + KL + + + F+L+F+WL ILG DV + ++ +FL+AF+F+FG+S + ES +F+FV +DV DRV F N N V +++L++TVF RWD ++ N + K I+N RRS
Sbjct: 726 DMAVRAFKLFDHDMDGKITKAEAKETVLNIYKERKALAAGLSDAKTAVRKLDNVFTVLLCFILLFVWLAILGVDVTNFFLTLSTFLLAFTFVFGNSVKELYESVVFLFVNHPFDVQDRVFF-----NNENCFVTEIHLMNTVFTRWDGMVISYPNAVLNKLPIQNARRS 889
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A836CK56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK56_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.490e-23 Identity = 59/175 (33.71%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 259 RHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEVNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRSGPATHAMTV 783
R L + S D ++++ F++++V R +L TL DY +I+ KL +S +L+ I I G D+M+ G +W++F++AFSFLFG +A+ E I +F+ +AY V+DR++ +DD N+ V K++LL+T R D + ++N + R+IRN R +TV
Sbjct: 162 RSALGMTKSADDANVSKDTFLKAVVRTMDSRIALKATLDDYISIVMKLDAALSVLAALVLLIICCIIAGVDLMTTGTTWLTFILAFSFLFGDTARKMFEGFILVFIWQAYAVSDRILIQDDSNEVQNLTVTKISLLTTELLRGDGMVYVMSNSAIQARDIRNISRGSFNCTTLTV 336
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Match: A0A4V1J016_ROZAC (EF-hand domain-containing protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4V1J016_ROZAC) HSP 1 Score: 104 bits (260), Expect = 9.360e-22 Identity = 59/170 (34.71%), Postives = 103/170 (60.59%), Query Frame = 1
Query: 247 EELARHTLRLLDSDQDERITRNEFVESIVNIYQQRKSLALTLKDYEAILSKLGYIISGFVLFLLMFIWLWILGQDVMSLGISWVSFLIAFSFLFGSSAQNFCESCIFIFVTRAYDVADRVMFRDDMGNEVNVIVEKVNLLSTVFRRWDSQLLYLANQGMAKREIRNQRRS 756
+++ + ++D+DQ+ ++R EF IVN+Y+++ ++ +L D +SKL I+ G L +L FIWL + + +L S +IA + + G+SA+N ES IF+FV+ YDV D + ++V +V+K+NLL+T+ +RWD ++YL N ++ +I N RRS
Sbjct: 321 KKILQEAFGVIDTDQNGELSRKEFKHFIVNVYKEKGNITKSLVDVANAMSKLDRILFGVCLVILAFIWLALYDIAIQNLLTLIASLIIATNVIVGNSAKNTFESVIFLFVSHPYDVGDTICV-----DKVEYVVQKINLLNTIVKRWDGVIIYLPNYILSNSQIGNFRRS 485 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7769.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7769.1.1 >prot_P-wetherbeei_contig7769.1.1 ID=prot_P-wetherbeei_contig7769.1.1|Name=mRNA_P-wetherbeei_contig7769.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp MTGSAGSHARGPGGEGSHGEAAGSRNSNGSGGASTVASSAAAATFGCGSAback to top mRNA from alignment at P-wetherbeei_contig7769:131..1393+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7769.1.1 ID=mRNA_P-wetherbeei_contig7769.1.1|Name=mRNA_P-wetherbeei_contig7769.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig7769:131..1393+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7769:131..1393+ >mRNA_P-wetherbeei_contig7769.1.1 ID=mRNA_P-wetherbeei_contig7769.1.1|Name=mRNA_P-wetherbeei_contig7769.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig7769:131..1393+ (Phaeothamnion wetherbeei SAG_119_79)back to top |