mRNA_P-wetherbeei_contig7763.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7763.1.3
Unique NamemRNA_P-wetherbeei_contig7763.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: A0A836C7V0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V0_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 1.360e-129
Identity = 246/381 (64.57%), Postives = 273/381 (71.65%), Query Frame = 1
Query:    4 VLVQLSEVQRVFYKHLLVSQDSNMLESIMAQAGPGGAPTXXXXXXXXXXXXXXXXXXXXGDSASQGASSGNGERK---ITDVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVAESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGGAMSKSELASLIRFGANAVYEAEDEDYSDRDLDALMGR 1137
            ++V+LS VQ  FY+HLLVSQ+S+ LE IMA A                            D  ++ A+S    R+   IT VDYRKLMNLLLQLRKVCNHPYLLAD    EG+D    EALVAASGKLQLLDRMLPRL+ADGHRVL+FTQFTSMLDILEE+C AR HEY RLDG+TNRVQRRLDIRRFNAP S LFIFLISTRAGGLGINLA+ADTV+LYDSDWNPQVDLQAMERAHRIGQTKPVR+YR+VCRGSVEERMVSRAEKKL+LNAMVAES   +  G+    XXXXXXX    XXXXXXXXX   GG                               MSKSELA+LIRFGANA++EAE EDY+D DLD L+GR
Sbjct:  210 LMVRLSVVQHAFYRHLLVSQESSQLEGIMAAAQAKAEERQTPVT----------------DETTKTAASAAAPRQQQPITSVDYRKLMNLLLQLRKVCNHPYLLADF---EGDDGG-AEALVAASGKLQLLDRMLPRLRADGHRVLLFTQFTSMLDILEEYCIARSHEYARLDGDTNRVQRRLDIRRFNAPASPLFIFLISTRAGGLGINLASADTVILYDSDWNPQVDLQAMERAHRIGQTKPVRVYRMVCRGSVEERMVSRAEKKLYLNAMVAESQADDDDGETATGXXXXXXXADAAXXXXXXXXXXXPGG-------------------------------MSKSELANLIRFGANAIFEAETEDYTDEDLDVLLGR 539          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: A0A7S3M4L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4L2_9STRA)

HSP 1 Score: 327 bits (838), Expect = 8.890e-102
Identity = 188/334 (56.29%), Postives = 223/334 (66.77%), Query Frame = 1
Query:  235 DVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVAESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGG-AMSKSELASLIRFGANAVYEAEDED--------YSDRDLDALMG-------RPVAALTTMEEESGEAAA 1188
            D D+RKLMNLLLQLRK+CNH YLL D+ P   E     E +V  SGKL +LDRMLP L+ +GHRVLIF+QFTSMLD+LE++C  R + +VRLDGETNRV+RRLD RRFNAP S LFIFLISTRAGGLG+NLA+ADTV+LYDSDWNPQVDLQAMERAHRIGQTKPVR+YRLVCRGSVEERMVSRAEKKLFLNAMVAE                                  V+  E       A++   + +    +  A G+GG A+SK ELASLIRFGANAV+E   ++         SD +LD L+        RP   L   + +S EA++
Sbjct:  115 DSDWRKLMNLLLQLRKICNHTYLLPDIAP---EPYTVSEDIVGGSGKLMMLDRMLPMLRRNGHRVLIFSQFTSMLDLLEDYCELREYPFVRLDGETNRVKRRLDCRRFNAPRSPLFIFLISTRAGGLGLNLASADTVILYDSDWNPQVDLQAMERAHRIGQTKPVRVYRLVCRGSVEERMVSRAEKKLFLNAMVAE----------------------------------VDPDEQLHEAGGAEEQSEDARRQAEISEALGIGGTAISKGELASLIRFGANAVFEGSVDNESGSGGNQISDEELDVLLEMQGRDLPRPAKVLQIADGQSTEASS 411          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: K8Z8U9_NANGC (Swi snf-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 19 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8U9_NANGC)

HSP 1 Score: 334 bits (857), Expect = 2.220e-100
Identity = 195/385 (50.65%), Postives = 237/385 (61.56%), Query Frame = 1
Query:  217 GERKITDVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVAESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGGAMSKSELASLIRFGANAVYEAEDEDYSDRDLDALMGRPVAALTTM--EEESGEAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEVDVRQLEGVNYEKGK 1365
            G  ++ D ++RKL+N+LLQLRKVCNHPYL++D     GE+      +V ASGKL++LDRMLP++KADGHRVL+F+QFTSMLDILEE+C  RGHEYVRLDG TNRVQRRLD+RRFNAP S+LF+FLISTRAGG+GINLA+ADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVR+YRLV R SVEERMVSRA KKLFLN +VAE   GE G                          +  G ED     E   +EN  ++ +      G   A+++ E+A +IR G  A+++    D +D +LD L+G    + T    + E G    A                                          EVDVR LEGVNYEK K
Sbjct:  604 GAHEMADPEWRKLLNILLQLRKVCNHPYLMSDSGYTVGEE------MVEASGKLKVLDRMLPKMKADGHRVLLFSQFTSMLDILEEYCQMRGHEYVRLDGSTNRVQRRLDMRRFNAPGSNLFVFLISTRAGGVGINLASADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRVYRLVVRASVEERMVSRAHKKLFLNEIVAEREEGEKG-----------------DTTLDDLADDGAGDEDTY---EGGGEENVDEDPVEEMGKVGSNTALARDEVARMIRTGVTALFDTNKGDLTDDELDVLLGLKDGSSTGAGGKSEGGNGNGALEEDAEDQEKAVAGFWQQAATGDLE-----------------EVDVRHLEGVNYEKAK 945          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: W7TYI9_9STRA (Swi snf matrix actin dependent regulator of subfamily member 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYI9_9STRA)

HSP 1 Score: 332 bits (851), Expect = 8.560e-98
Identity = 194/385 (50.39%), Postives = 236/385 (61.30%), Query Frame = 1
Query:  217 GERKITDVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVAESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGGAMSKSELASLIRFGANAVYEAEDEDYSDRDLDALMGRPVAALTTM--EEESGEAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEVDVRQLEGVNYEKGK 1365
            G  ++ D ++RKL+N+LLQLRKVCNHPYL++D     GE+      +V ASGKL++LDRMLP++KADGHRVL+F+QFTSMLDILEE+C  RGHEYVRLDG TNRVQRRLD+RRFNAP S+LF+FLISTRAGG+GINLA+ADTVVLYDSDWNPQVDLQAMERAHRIGQ KPVR+YRLV R SVEERMVSRA KKLFLN +VAE   GE G                          +  G ED     E   +EN  ++ +      G   A+++ E+A +IR G  A+++    D +D +LD L+G    + T    + E G    A                                          EVDVR LEGVNYEK K
Sbjct: 1697 GAHEMADPEWRKLLNILLQLRKVCNHPYLMSDSGYTVGEE------MVEASGKLKVLDRMLPKMKADGHRVLLFSQFTSMLDILEEYCQMRGHEYVRLDGSTNRVQRRLDMRRFNAPGSNLFVFLISTRAGGVGINLASADTVVLYDSDWNPQVDLQAMERAHRIGQIKPVRVYRLVVRASVEERMVSRAHKKLFLNEIVAEREEGEKG-----------------DTTLDDLADDGAGDEDTY---EGGGEENVDEDPVEEMGKVGSNTALARDEVARMIRTGVTALFDTNKGDLTDDELDVLLGLKDGSSTGAGGKSEGGNGNGALEEDAEDQEKAVAGFWQQAATGDLE-----------------EVDVRHLEGVNYEKAK 2038          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: A0A7S0X2S5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X2S5_9CHLO)

HSP 1 Score: 258 bits (659), Expect = 3.580e-79
Identity = 130/195 (66.67%), Postives = 154/195 (78.97%), Query Frame = 1
Query:  241 DYRKLMNLLLQLRKVCNHPYLLA--DVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVA 819
            D RKL +LL+QLRK CNHPYL A  +VP    ++  PVE L+ ASGKL +LDR+L RLKA GHRV++F+QFTSMLDIL ++ S +G+++ RLDG TNRVQR +DI  FN PNS +F FL+STRAGGLG+NL TADT +LYDSDWNPQVD QAM R HRIGQ KPV IYRLV  G+VEERM  RAEKKLFL  MV+
Sbjct:   21 DQRKLQSLLMQLRKCCNHPYLFAGTEVP----DEGVPVEELIEASGKLGVLDRILTRLKAGGHRVVLFSQFTSMLDILSDYLSLKGYQFARLDGSTNRVQRSIDIAAFNRPNSPMFAFLLSTRAGGLGVNLQTADTCILYDSDWNPQVDTQAMARVHRIGQKKPVHIYRLVTAGTVEERMQQRAEKKLFLEQMVS 211          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: C1DZK6_MICCC (SNF2 super family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZK6_MICCC)

HSP 1 Score: 267 bits (683), Expect = 2.150e-75
Identity = 137/206 (66.50%), Postives = 159/206 (77.18%), Query Frame = 1
Query:  208 SGNGERKITDVDYRKLMNLLLQLRKVCNHPYLLA--DVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVA 819
            SG G +K    D++KL +LL+QLRK CNHPYL A  DVP    ED  PVE LV ASGKL +LDR+L RLK  GHRV++F+QFTSMLDIL +F + RG+++ RLDG TNRVQR +DI  FN PNS +F FL+STRAGGLG+NL TADT VLYDSDWNPQVD QAM R HRIGQ KPV +YRLV  G+VEERM  RAEKKLFL  MV+
Sbjct:  777 SGAGGKKENAGDFKKLQSLLMQLRKCCNHPYLFAGTDVP----EDGVPVEELVEASGKLAVLDRILKRLKDQGHRVVLFSQFTSMLDILSDFLTLRGYQFARLDGSTNRVQRSIDIAAFNRPNSPMFAFLLSTRAGGLGVNLQTADTCVLYDSDWNPQVDTQAMARVHRIGQKKPVHVYRLVTAGTVEERMQQRAEKKLFLEQMVS 978          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: A4S600_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S600_OSTLU)

HSP 1 Score: 254 bits (648), Expect = 2.760e-75
Identity = 127/195 (65.13%), Postives = 155/195 (79.49%), Query Frame = 1
Query:  241 DYRKLMNLLLQLRKVCNHPYLLA--DVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVA 819
            +++KL +LL+QLRK CNHP+L    DVP    ED  P+E L++ASGKL +LDRML +LK  GHRV++F+QFTSMLDIL++F + RG+ Y RLDG TNRVQR +DI  FN P+S +F FL+STRAGGLG+NL TADT +L+DSDWNPQVDLQAM R HRIGQ K V IYRLV  G+VEERM  RAEKKLFL+ MV+
Sbjct:  283 NFQKLNSLLMQLRKCCNHPFLFTGTDVP----EDGVPIEDLISASGKLAVLDRMLQKLKEGGHRVVLFSQFTSMLDILQDFLTLRGYTYARLDGSTNRVQRSIDIAAFNRPDSPMFAFLLSTRAGGLGVNLQTADTCILFDSDWNPQVDLQAMARVHRIGQKKMVHIYRLVTAGTVEERMTQRAEKKLFLDQMVS 473          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: A0A6H5KTV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV3_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 6.940e-75
Identity = 179/405 (44.20%), Postives = 223/405 (55.06%), Query Frame = 1
Query:    4 VLVQLSEVQRVFYKHLLVSQDSNMLESIMA--QAGPGGAPTXXXXXXXXXXXXXXXXXXXXGDSASQGASSGNGER----KITDVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGE-DAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGL--GINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVS-RAEKKLFLNAMVAESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGGAMSKSELASLIRFGANAVYEA-EDEDYSDRDLDALMGRPVAALTTMEEESGEAA 1185
            +LV+L+  Q + Y+HLLV QD  + ++I    Q   GG                       GD        G  E     K  D  Y+KLM LL  LRK CNHP++L DV  + GE +A+ V+  VAASGKL LLDRMLPRL+A GHR LI +QF SMLDILE+ C ARG+E+ RLD  T+  Q RLD RRFNAP S + + L+ TR  G   G+NL  ADTV+LYDS WNPQVDLQA+ERAHRIGQ+KPV+++RL+CR SVEER+V+ R     F N   +E                                   EG      R + D  E     AL VG   G+  +MSK ELASLI  GA AV E  ED D +D +LDAL+  P    TT+ E + E+A
Sbjct: 1163 ILVKLTPAQHLVYRHLLVIQDRKLADAIRVEGQKHDGGGAVRGGDGGPTSPGRAVAGESCGGDRGDANGDCGEDEMAAVAKREDEHYQKLMTLLGHLRKACNHPHMLVDVERSVGETEAQTVDYTVAASGKLALLDRMLPRLQAKGHRCLILSQFASMLDILEDLCLARGYEHGRLDESTSSSQTRLDARRFNAPESKVSVLLVPTRMAGASGGLNLTAADTVILYDSHWNPQVDLQAIERAHRIGQSKPVKVFRLLCRRSVEERIVADRRRHHDFANMDGSE----------------------------WGSPDSAEGHRGREHRGKGDAPE-----ALVVG---GLEDSMSKGELASLIHEGARAVVEPQEDGDLTDAELDALIAHPSPPSTTLSEGARESA 1531          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: F0YB66_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB66_AURAN)

HSP 1 Score: 254 bits (650), Expect = 1.250e-74
Identity = 168/401 (41.90%), Postives = 221/401 (55.11%), Query Frame = 1
Query:    4 VLVQLSEVQRVFYKHLLVSQDSNMLESIMAQAGPGGAPTXXXXXXXXXXXXXXXXXXXXGDSASQGASSGNGERKITDVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGEDAEPV---EALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMV-AESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGGAMSKSELASLIRFGANAVYEAEDED--YSDRDLDALMGRPVAALTTMEEESGEAAA 1188
            +L  L+  QR +YK LL+ Q S +L  + + A   GA                            GA+SG          ++KL +LL+QLRK CNHPYL       EG D +P    +ALV ASGKL +LDR+L +LKA GHR ++F+QFTS LD+L++    RG+E+ RLDG TNRVQR +DI+ FNAP S +F+FL+STRAGGLG+NL TADT +L+DSDWNPQ D QAM R HRIGQTKPV +YRLV +G+VEER+V RAEKKL+L++MV  +  R  A  DG                              A   + AD D                  A + SEL + + FGA+A+    D D   SD +LDA++ R   A T++ +     AA
Sbjct:  238 ILCPLAPCQRWWYKRLLLRQ-SQLLAELESDAKDAGA----------------------------GAASGG---------WKKLQSLLMQLRKCCNHPYLF------EGADPDPGVTDDALVEASGKLHVLDRLLTKLKAKGHRCVLFSQFTSTLDLLDDVLRYRGYEFSRLDGSTNRVQRTVDIQAFNAPGSGVFLFLMSTRAGGLGVNLQTADTCILFDSDWNPQADAQAMARVHRIGQTKPVHVYRLVTKGTVEERIVQRAEKKLYLDSMVNRDGARVAAAQDG------------------------------AAAADAADGD------------------APTGSELLASLTFGAHAIVNGTDADRPLSDAELDAIIDRTRTADTSLGDVLSGGAA 546          
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Match: D8LCY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY6_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 3.200e-74
Identity = 174/409 (42.54%), Postives = 225/409 (55.01%), Query Frame = 1
Query:    4 VLVQLSEVQRVFYKHLLVSQDSNMLESIMAQ--------AGPGGAPTXXXXXXXXXXXXXXXXXXXXGDSASQGASSGNGER---------KITDVDYRKLMNLLLQLRKVCNHPYLLADVPPAEGE-DAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFTSMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLISTRAGGL--GINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVCRGSVEERMVSRAEKKLFLNAMVAESVRGEAGGDGGXXXXXXXXXXXXXXXXXXXXXXEVEGGEDAVVREEADD--DENEWQNALSVGSAAGMGGAMSKSELASLIRFGANAVYEA-EDEDYSDRDLDALMGRPVAALTTM 1161
            +LV+L+  Q + Y+HLLV QD  + ++I  +        AG GG                       G+S  +G    NGE          K  D  Y+KLM LL+ LRK CNHP++L DV  + GE +++ V+  VAASGKL LLDRMLPRL+A GHR LI +QF SMLDIL++ C ARG+E+ RLD  T+  Q RLD RRFNAP S + + L+ TR  G   G+NL  ADTV+LYDS WNPQVDLQA+ER HRIGQ+KPV+++RL+CR SVEER+V+   +      M  +                                    G  D+       D  DE + Q AL+VG   G   +MSK ELASLI  GA AV E  ED D +D +LDAL+  P +  TT+
Sbjct: 1146 ILVKLTPAQHLVYRHLLVIQDRKLADAIRVEGQKHDGVGAGRGG-----------DGGPMSPGRAVAGESCGEGRGDANGECREDEMAAVVKREDEHYQKLMTLLVHLRKACNHPHMLVDVERSVGETESQTVDYTVAASGKLALLDRMLPRLQAKGHRCLILSQFASMLDILQDLCLARGYEHGRLDESTSSPQTRLDARRFNAPESKVSVLLVPTRMTGASGGLNLTAADTVILYDSHWNPQVDLQAIERVHRIGQSKPVKVFRLLCRRSVEERIVAERRRHYDCAKMDVDEW----------------------------------GSPDSAKGHRGRDHRDEKDAQEALAVG---GEEDSMSKGELASLIHEGARAVVEPQEDGDLTDAELDALIATPSSPSTTL 1506          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7763.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7V0_9STRA1.360e-12964.57P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3M4L2_9STRA8.890e-10256.29Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
K8Z8U9_NANGC2.220e-10050.65Swi snf-related matrix-associated actin-dependent ... [more]
W7TYI9_9STRA8.560e-9850.39Swi snf matrix actin dependent regulator of subfam... [more]
A0A7S0X2S5_9CHLO3.580e-7966.67Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
C1DZK6_MICCC2.150e-7566.50SNF2 super family n=1 Tax=Micromonas commoda (stra... [more]
A4S600_OSTLU2.760e-7565.13Uncharacterized protein (Fragment) n=1 Tax=Ostreoc... [more]
A0A6H5KTV3_9PHAE6.940e-7544.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YB66_AURAN1.250e-7441.90Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
D8LCY6_ECTSI3.200e-7442.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7763contigP-wetherbeei_contig7763:632..2906 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog296587.XP_002499876.1
PFAMsHelicase_C,SNF2_N,zf-CW
Model size1365
Max annot lvl3041|Chlorophyta
KEGG koko:K11654
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.53e-76
EggNOG OGsCOG0553@1|root,COG2940@1|root,KOG1525@1|root,KOG0385@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1525@2759|Eukaryota,37Q2M@33090|Viridiplantae,34H9E@3041|Chlorophyta
DescriptionSNF2 family N-terminal domain
Cds size1365
COG categoryA
BRITEko00000,ko01000,ko03021,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186999.7335367-CDS-P-wetherbeei_contig7763:631..8221683186999.7335367-CDS-P-wetherbeei_contig7763:631..822Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7763 632..822 +
1683186999.746179-CDS-P-wetherbeei_contig7763:1032..11231683186999.746179-CDS-P-wetherbeei_contig7763:1032..1123Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7763 1033..1123 +
1683186999.7639923-CDS-P-wetherbeei_contig7763:1370..17631683186999.7639923-CDS-P-wetherbeei_contig7763:1370..1763Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7763 1371..1763 +
1683186999.778559-CDS-P-wetherbeei_contig7763:2030..26721683186999.778559-CDS-P-wetherbeei_contig7763:2030..2672Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7763 2031..2672 +
1683186999.7973807-CDS-P-wetherbeei_contig7763:2858..29061683186999.7973807-CDS-P-wetherbeei_contig7763:2858..2906Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7763 2859..2906 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7763.1.3prot_P-wetherbeei_contig7763.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7763 632..2906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7763.1.3

>prot_P-wetherbeei_contig7763.1.3 ID=prot_P-wetherbeei_contig7763.1.3|Name=mRNA_P-wetherbeei_contig7763.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=455bp
QVLVQLSEVQRVFYKHLLVSQDSNMLESIMAQAGPGGAPTPAAAAAPAPA
AVAAAAAATEGDSASQGASSGNGERKITDVDYRKLMNLLLQLRKVCNHPY
LLADVPPAEGEDAEPVEALVAASGKLQLLDRMLPRLKADGHRVLIFTQFT
SMLDILEEFCSARGHEYVRLDGETNRVQRRLDIRRFNAPNSSLFIFLIST
RAGGLGINLATADTVVLYDSDWNPQVDLQAMERAHRIGQTKPVRIYRLVC
RGSVEERMVSRAEKKLFLNAMVAESVRGEAGGDGGSGKGKGKGKTSTASA
VAAGGGGEVEGGEDAVVREEADDDENEWQNALSVGSAAGMGGAMSKSELA
SLIRFGANAVYEAEDEDYSDRDLDALMGRPVAALTTMEEESGEAAAAGTA
AAAGTDGCGGGASSEGGTSRTKAAGATDATGKTEGEGAAEVDVRQLEGVN
YEKGK
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mRNA from alignment at P-wetherbeei_contig7763:632..2906+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7763.1.3 ID=mRNA_P-wetherbeei_contig7763.1.3|Name=mRNA_P-wetherbeei_contig7763.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2275bp|location=Sequence derived from alignment at P-wetherbeei_contig7763:632..2906+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTCCTGGTGCAGCTGTCGGAGGTGCAGCGCGTCTTCTACAAGCACCT CCTCGTCTCGCAGGACAGCAACATGCTCGAGAGCATCATGGCCCAGGCCG GCCCTGGAGGCGCGCCTACCCCCGCCGCCGCTGCCGCCCCGGCCCCAGCT GCTGTGGCAGCGGCCGCCGCCGCCACCGAGGGAGATTCGGCGTCTGGCGA GGTGGCAGCCGGGGCAGGCGACGGCGGCCGCGGCGTCCATGCCGGGGCGG CGGCGGCGAGCACCGCTGAGGGTGACGGGACTAGTGGGGCCAACCGCACC GCGGAAACCGCGGACGGCGGCGATGCGAGCAGCGAGAAGGCCGCTTCCAG CGGCGACTCCGCTGCCGCGACTGTCTCTGCCAGCGGCGGCGGTGGCGCCA GTAGCCAAGGCGCGAGCAGCGGCAACGGCGAGCGAAAGATTACCGATGTC GACTATCGCAAGCTCATGAACCTCTTGCTGCAGCTCCGCAAGGTGAAGAA ACAATGAGGAATGCTGCTCGTCGCTCAAATCTTGGTAGACTTGCCATCAT CATCTTCCGCCAGCGCGTATTCTACCGTTTGCCCTGACCGCCTGGAACTG TTAACTTCTGAAGAACCGTCCTCTTACGCTCTTTTTAATCATCCCCTCTT CTCTCTTCCCTGCGTTGCTTCCCGGCGCCCCCGTCATGCAAGCTAATTGT CACACGCCAACACCCCATTGCTGCCACCAACTGCACCAGGTGTGCAACCA CCCGTACCTGCTGGCGGACGTGCCCCCCGCCGAGGGCGAGGACGCCGAAC CGGTCGAAGCGCTCGTGGCGGCCAGTGGCAAGCTACAGCTTCTCGACCGC ATGCTGCCGCGCCTCAAGGCAGACGGCCACCGCGTGCTCATCTTCACGCA GTTCACGAGCATGCTGGACATCCTCGAAGAGTTCTGCAGCGCGCGCGGCC ACGAGTACGTGCGCCTGGACGGCGAGACAAACCGGGTGCAGCGGCGGCTC GACATTCGTCGCTTCAACGCGCCCAACAGCTCACTCTTCATCTTTTTGAT CTCGACGCGCGCGGGCGGGCTCGGCATCAACCTGGCGACGGCGGACACGG TCGTGCTCTACGACTCGGACTGGAACCCCCAGGTGAGACAAAGAGAGATC TGTTGACTGATGTCGGGGTTTTGTTTTCGGTGCAACAGGGGAAGCTGCAG ACAGATGTGAAAGGAGGCCGGGAGGTATCACGGAAGGCATGCATTCTTCT GACGCGAGCGGTGGCAAGCATAGACCTTCTGGCAAAGATGGAGGCTTTCG CCGCTTTAGCATGCCGATCGGCTGTTCACTCTCTTCCAAATCGCTGTATC TTCTAACGGCATGCTGTTTCATTTCTCGCCGTTTTTTTTCCCGCAACAGG TGGACCTGCAGGCGATGGAGCGCGCCCACCGCATCGGCCAGACGAAGCCC GTCCGCATCTACCGCCTCGTCTGCCGCGGCTCCGTCGAGGAGCGCATGGT CAGCCGCGCCGAGAAGAAGCTCTTCCTCAACGCCATGGTCGCCGAGTCTG TCCGCGGCGAGGCCGGTGGCGACGGCGGCAGCGGCAAGGGCAAGGGCAAG GGGAAAACCAGCACCGCATCGGCGGTGGCGGCCGGCGGCGGCGGTGAGGT GGAAGGCGGCGAGGACGCGGTGGTGCGGGAGGAGGCGGACGACGACGAGA ACGAGTGGCAGAACGCGCTGTCGGTGGGCAGTGCGGCGGGCATGGGCGGC GCCATGAGCAAGTCCGAGCTGGCATCTCTGATTCGTTTTGGTGCCAATGC CGTGTACGAAGCCGAGGACGAGGACTATTCCGACCGCGACCTCGACGCGC TCATGGGCCGCCCGGTGGCGGCACTGACAACGATGGAAGAGGAGTCTGGC GAGGCCGCTGCTGCTGGCACTGCGGCAGCGGCGGGGACGGACGGCTGCGG AGGCGGCGCGAGCAGCGAGGGCGGGACCAGCAGGACGAAAGCAGCCGGCG CGACGGATGCGACCGGAAAGACGGAGGGAGAAGGAGCCGCCGTTGATGCC GCTGCCGTTTCTGGTGCCGTTGTCGGTACCGCCGCTGACGGTGCCGACAG CACCGCTGCGGCCACGACAGGCAACGGGATATCAGACCCGACCGCCGACC TCGCCGCTGCCGCCGCCAATGCCGCTGCGTCCGCCGCGGCGGTGGCGTTG CAGCCACGGCGCGCGCGCATCCTGAAGGAGGTGGACGTGCGGCAGCTGGA GGGAGTCAACTACGAGAAAGGTAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7763:632..2906+

>mRNA_P-wetherbeei_contig7763.1.3 ID=mRNA_P-wetherbeei_contig7763.1.3|Name=mRNA_P-wetherbeei_contig7763.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig7763:632..2906+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTCCTGGTGCAGCTGTCGGAGGTGCAGCGCGTCTTCTACAAGCACCT
CCTCGTCTCGCAGGACAGCAACATGCTCGAGAGCATCATGGCCCAGGCCG
GCCCTGGAGGCGCGCCTACCCCCGCCGCCGCTGCCGCCCCGGCCCCAGCT
GCTGTGGCAGCGGCCGCCGCCGCCACCGAGGGAGATTCGGCTAGCCAAGG
CGCGAGCAGCGGCAACGGCGAGCGAAAGATTACCGATGTCGACTATCGCA
AGCTCATGAACCTCTTGCTGCAGCTCCGCAAGGTGTGCAACCACCCGTAC
CTGCTGGCGGACGTGCCCCCCGCCGAGGGCGAGGACGCCGAACCGGTCGA
AGCGCTCGTGGCGGCCAGTGGCAAGCTACAGCTTCTCGACCGCATGCTGC
CGCGCCTCAAGGCAGACGGCCACCGCGTGCTCATCTTCACGCAGTTCACG
AGCATGCTGGACATCCTCGAAGAGTTCTGCAGCGCGCGCGGCCACGAGTA
CGTGCGCCTGGACGGCGAGACAAACCGGGTGCAGCGGCGGCTCGACATTC
GTCGCTTCAACGCGCCCAACAGCTCACTCTTCATCTTTTTGATCTCGACG
CGCGCGGGCGGGCTCGGCATCAACCTGGCGACGGCGGACACGGTCGTGCT
CTACGACTCGGACTGGAACCCCCAGGTGGACCTGCAGGCGATGGAGCGCG
CCCACCGCATCGGCCAGACGAAGCCCGTCCGCATCTACCGCCTCGTCTGC
CGCGGCTCCGTCGAGGAGCGCATGGTCAGCCGCGCCGAGAAGAAGCTCTT
CCTCAACGCCATGGTCGCCGAGTCTGTCCGCGGCGAGGCCGGTGGCGACG
GCGGCAGCGGCAAGGGCAAGGGCAAGGGGAAAACCAGCACCGCATCGGCG
GTGGCGGCCGGCGGCGGCGGTGAGGTGGAAGGCGGCGAGGACGCGGTGGT
GCGGGAGGAGGCGGACGACGACGAGAACGAGTGGCAGAACGCGCTGTCGG
TGGGCAGTGCGGCGGGCATGGGCGGCGCCATGAGCAAGTCCGAGCTGGCA
TCTCTGATTCGTTTTGGTGCCAATGCCGTGTACGAAGCCGAGGACGAGGA
CTATTCCGACCGCGACCTCGACGCGCTCATGGGCCGCCCGGTGGCGGCAC
TGACAACGATGGAAGAGGAGTCTGGCGAGGCCGCTGCTGCTGGCACTGCG
GCAGCGGCGGGGACGGACGGCTGCGGAGGCGGCGCGAGCAGCGAGGGCGG
GACCAGCAGGACGAAAGCAGCCGGCGCGACGGATGCGACCGGAAAGACGG
AGGGAGAAGGAGCCGCCGAGGTGGACGTGCGGCAGCTGGAGGGAGTCAAC
TACGAGAAAGGTAAG
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