mRNA_P-wetherbeei_contig7740.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7740.3.1
Unique NamemRNA_P-wetherbeei_contig7740.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A3A4RA15_9BURK (DUF3047 domain-containing protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A3A4RA15_9BURK)

HSP 1 Score: 479 bits (1232), Expect = 4.890e-169
Identity = 243/295 (82.37%), Postives = 255/295 (86.44%), Query Frame = 1
Query:    1 MRRLIYLQHAPATNSLKGLGTSFRESLL-RWMGSLVGAVLLVLALAGCAWQPLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRAD 882
            M R I LQH  A++  KG G   R S   R +GSL GA LLV AL GCAW P E DDR+DDAAPSRPQRLP   N ELLKASSRLFSTP  GVPWEPFFFPGKRYT FEPV   ERPALRVRAKSSVSILRQRFEPSL +VGRLSFSWKVDGLP +ADLAVSARADS VRVVLAF+GDRTRWTPRNHRLSEMSRLLTGEELPYA+LVYVWS K+PPGTVVVNPRTDRIRK+VLDSGTADVGRWRDHVRDVRADFR AFGEEPGPLR+VALMTDTDNT+SQLTAWYGALTLER  D
Sbjct:    1 MPRSICLQHVLASDGFKGAGAPERGSRCWRRVGSLAGATLLVGALGGCAWLPSETDDRLDDAAPSRPQRLPEAVNVELLKASSRLFSTPVSGVPWEPFFFPGKRYTAFEPVQVMERPALRVRAKSSVSILRQRFEPSLPSVGRLSFSWKVDGLPLDADLAVSARADSPVRVVLAFEGDRTRWTPRNHRLSEMSRLLTGEELPYATLVYVWSPKDPPGTVVVNPRTDRIRKMVLDSGTADVGRWRDHVRDVRADFRRAFGEEPGPLRVVALMTDTDNTQSQLTAWYGALTLERSVD 295          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A6P1J893_9BURK (DUF3047 domain-containing protein n=1 Tax=Hydrogenophaga sp. BPS33 TaxID=2651974 RepID=A0A6P1J893_9BURK)

HSP 1 Score: 380 bits (975), Expect = 2.810e-130
Identity = 191/271 (70.48%), Postives = 222/271 (81.92%), Query Frame = 1
Query:   73 ESLLRWMGSLVGAVLLVLALAGC-AWQPLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRAD 882
            ++L R +  LV  V   +AL GC AW P   DD  +D A  R ++   GA +E+L A+SRLFSTPA  VPWE   FPGKR T FE V  + RPALRVRA SSVSILRQRFEPSL +VGR+S SW+VDG+P++ADL++S +ADS VRVVL+F+GDR+RWTPRNHRLSEMSRL+TGEELPYASLVYVWS K+ PGTVVVNPRTDRIRK+VLDSG A +G+WRDHVRDVRADFRLAFGE+PGPLR+VA+MTDTDNT SQLTAWYGALTLER  D
Sbjct:    2 KNLKRRVIFLVSLVFTGVALMGCTAWSPAPGDDPAEDGAEPRERQASMGARSEVLAAASRLFSTPASEVPWESVRFPGKRTTAFESVQVAGRPALRVRANSSVSILRQRFEPSLASVGRVSLSWRVDGIPQDADLSLSGKADSPVRVVLSFEGDRSRWTPRNHRLSEMSRLVTGEELPYASLVYVWSAKDAPGTVVVNPRTDRIRKVVLDSGVAHLGQWRDHVRDVRADFRLAFGEDPGPLRMVAVMTDTDNTGSQLTAWYGALTLERARD 272          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: UPI0010F43986 (DUF3047 domain-containing protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0010F43986)

HSP 1 Score: 372 bits (956), Expect = 6.580e-128
Identity = 183/236 (77.54%), Postives = 201/236 (85.17%), Query Frame = 1
Query:  175 DDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRAD 882
            DD +      +  G   E LKA+ RLF TPA  VPWEP FFPGKRY+ FE V  S R ALRVRA SSVSILRQRF PSL +VGR+SFSW+VDG+PK+ADLAVS++ADS VRVVLAFDGDR RWTP+NHRLSEMSRLLTGEELPYASLVYVWS KE PGTVVVNPRTDRIRK+VLDSG A++G+WRDHVRDVRADFRLAFGE+PGPLRLVALMTDTDNT S+LTAWYGALTLER  D
Sbjct:    3 DDVSEPGQHNVSNGTRPEALKAAGRLFKTPAANVPWEPVFFPGKRYSAFESVEVSGRAALRVRASSSVSILRQRFVPSLASVGRVSFSWRVDGVPKDADLAVSSQADSPVRVVLAFDGDRARWTPKNHRLSEMSRLLTGEELPYASLVYVWSAKEAPGTVVVNPRTDRIRKVVLDSGVANIGQWRDHVRDVRADFRLAFGEDPGPLRLVALMTDTDNTGSELTAWYGALTLERAND 238          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A6P1IMH5_9BURK (DUF3047 domain-containing protein n=1 Tax=Hydrogenophaga sp. PBL-H3 TaxID=434010 RepID=A0A6P1IMH5_9BURK)

HSP 1 Score: 331 bits (849), Expect = 4.890e-111
Identity = 175/272 (64.34%), Postives = 202/272 (74.26%), Query Frame = 1
Query:   67 FRESLLRWMGSLVGAVLLVLALAGCAWQ-PLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRA 879
            F  SL++ +     A  L L L GCA   P   D   +DAA +          A L  A+++L  TP   +PW+PF  PGKRY VFEPV    RPALRVRA+SSVSILR++FEP+L A GRL+FSWKVD LP  ADLA +  ADS VR+VL F+GDR+RWTP+ HRLSEMSRLLTGEELPYA+L+YVW  +E  GTVVVNPRTDRIRKLVLDSGT+ +G WRDHVRDV+ADFR AFGEEPGPLR+VALMTDTDNT S LTAWYGALTLE  A
Sbjct:   15 FSSSLVKGLA----AFALALGLVGCAVSAPGHEDLAANDAANT-------AREAALSAATAQLLFTPPSALPWQPFALPGKRYEVFEPVAVQARPALRVRAQSSVSILRRQFEPALLAPGRLAFSWKVDALPLAADLAAADAADSPVRIVLGFEGDRSRWTPKMHRLSEMSRLLTGEELPYATLIYVWGNQEALGTVVVNPRTDRIRKLVLDSGTSQLGVWRDHVRDVQADFRQAFGEEPGPLRVVALMTDTDNTRSALTAWYGALTLEAAA 275          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A2W4U3V6_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A2W4U3V6_9BURK)

HSP 1 Score: 330 bits (845), Expect = 1.610e-110
Identity = 167/260 (64.23%), Postives = 197/260 (75.77%), Query Frame = 1
Query:   94 GSLVGAVL-LVLALAGCAWQPLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLE 870
            G  +G +L LVL L  C+  P   D  ++ A   R Q         L +A+ RL +TP   + W+PF  PGKRY V+EP+    RPALRV+A +SVSILR+RFEP+L A GRL+FSWK D LP NADLA +  +DS V V+L F+GDRTRW+P+ HRLSEMSRLLTGEELPYA+L+YVW  KE PGTVVVNPRTDRIRKLVLDSGT+++G WRDHVRDV+ADFR AFGEEPGPLR+VALMTDTDNT S LTAWYGAL LE
Sbjct:   14 GKRLGLLLALVLLLPACSAPPEAVDGEIEAAMAGRQQLA-------LTRAAERLLTTPPSTLAWQPFALPGKRYVVYEPMNVLGRPALRVKADNSVSILRRRFEPTLSAPGRLAFSWKADALPLNADLAAADASDSPVGVLLGFEGDRTRWSPKMHRLSEMSRLLTGEELPYATLIYVWGNKEAPGTVVVNPRTDRIRKLVLDSGTSELGNWRDHVRDVQADFRQAFGEEPGPLRVVALMTDTDNTRSALTAWYGALKLE 266          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A1Y2R765_9BURK (Uncharacterized protein n=2 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R765_9BURK)

HSP 1 Score: 328 bits (840), Expect = 4.490e-110
Identity = 173/259 (66.80%), Postives = 193/259 (74.52%), Query Frame = 1
Query:  130 LAGCAWQPLEADDR--------VDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRAD 882
            LAGC   PL  +D         VD A+   P +L   AN         L +TPA    WE F FPGKR+  FEPV   ER ALRV+A SSVSILRQRFEP+L  VGRLSFSW+VDGLP  ADL  +A ADS VRVVLAF+GDR RW P+ HRLSEMSRL TGEELPYA+LVYVWS+++ PG+VV+NPRTDRIRKLVLDSGT  +G+WRDHVRDVRADF LAFGEEPGPLR VALMTDTDNT+S LTAWYG LTLE  AD
Sbjct:    2 LAGCVG-PLAREDAPGTDDTLAVDSASVKAPPKLKAAANL--------LLTTPARVPDWETFVFPGKRFAPFEPVSVLERQALRVKASSSVSILRQRFEPTLSHVGRLSFSWRVDGLPDKADLTQAALADSPVRVVLAFEGDRQRWPPKAHRLSEMSRLFTGEELPYATLVYVWSVRDAPGSVVLNPRTDRIRKLVLDSGTERLGQWRDHVRDVRADFLLAFGEEPGPLRAVALMTDTDNTQSGLTAWYGTLTLEGAAD 251          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: UPI0014723FB8 (DUF3047 domain-containing protein n=1 Tax=Hydrogenophaga palleronii TaxID=65655 RepID=UPI0014723FB8)

HSP 1 Score: 325 bits (833), Expect = 6.620e-109
Identity = 165/258 (63.95%), Postives = 190/258 (73.64%), Query Frame = 1
Query:  112 VLLVLALAGCAWQ-PLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRAD 882
            +L  L L GCA    +E +   D   P         A+  L KA+  L +TP    PWEPF  PGKR+  FEPV +  R ALRV+A  SVSILRQRFEP L + G LSFSW+++GLP NADLAV+A+AD+AVR+VLAFDGDR+RW+ RNHRLS+MSRLLTGE LPYASLVYVWS K+ PG+VVVN RTD IRKLV+DSGT  VG WRDHVRDVRADFR  FGEEPGPL  V LMTDTDNT S+LTAWYG+L LE   D
Sbjct:    1 MLATLMLGGCAGPLAIEEEWAADGDTPIESGSTSRAASPALEKAAGLLLTTPEAHAPWEPFLLPGKRHAAFEPVQSQGRTALRVQANQSVSILRQRFEPPLMSPGHLSFSWRINGLPLNADLAVAAQADAAVRIVLAFDGDRSRWSARNHRLSDMSRLLTGEPLPYASLVYVWSAKDAPGSVVVNSRTDSIRKLVIDSGTTHVGVWRDHVRDVRADFRQVFGEEPGPLLQVGLMTDTDNTNSRLTAWYGSLLLEHAVD 258          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A0T2ZBP9_9BURK (Uncharacterized protein n=2 Tax=Hydrogenophaga sp. Root209 TaxID=1736490 RepID=A0A0T2ZBP9_9BURK)

HSP 1 Score: 312 bits (800), Expect = 1.250e-103
Identity = 161/262 (61.45%), Postives = 191/262 (72.90%), Query Frame = 1
Query:   85 RWMGSLVGAVLLVLALAGCAWQPLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLE 870
            RW+G L     L L +  C   P EA D  ++   S       G    L + + RL  TP   + W+PF  PGKR+  +EPV    RP+LRV+A +SVSILR+RFEP+L A GRL+FSW+VD LP  ADLA +  +DS V +VL F+GDRTRWTP+ HRLSE SRLLTGEELPYA+L+YVW  KE PGTVVVNPRTDRIRKLVLDSG + +G WRDHVR+V+AD+R AFGEEPGPLR+VALMTDTDNT S LTAWYGALTLE
Sbjct:   21 RWLGVL----FLTLGVVACTVPP-EAGDSDNEVVAS-------GRQLALDRTAERLLITPHSAMAWQPFALPGKRFVAYEPVDVLARPSLRVKADNSVSILRRRFEPALLAPGRLAFSWRVDALPMAADLAKADASDSPVGIVLGFEGDRTRWTPKMHRLSEWSRLLTGEELPYATLIYVWGNKEAPGTVVVNPRTDRIRKLVLDSGPSQLGHWRDHVRNVQADYRHAFGEEPGPLRVVALMTDTDNTGSALTAWYGALTLE 270          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: UPI0015610E85 (DUF3047 domain-containing protein n=1 Tax=Hydrogenophaga sp. RAC07 TaxID=1842537 RepID=UPI0015610E85)

HSP 1 Score: 310 bits (794), Expect = 1.550e-103
Identity = 150/213 (70.42%), Postives = 173/213 (81.22%), Query Frame = 1
Query:  229 LLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTL 867
            +  A++R  +TP   + W+ F  PGKR+ VFEPV    RPALRV+A SSVSI R++FEP+L   GR+SFSW+VD LP+ ADLA +  +DS V VVL F+GDRTRW+P+ HRLSEMSRL+TGEELPYA+LVYVW  +E PGTVVVNPRTDRIRKLVLDSGT DVG WRDHVRDVRADFRL FGEEPGPLR+VALMTDTDNT S LTAWYG L L
Sbjct:    1 MSHAAARHLTTPPSALNWQSFALPGKRHVVFEPVEVLARPALRVKADSSVSIFRRQFEPTLSQPGRISFSWRVDALPEGADLAAADASDSPVGVVLGFEGDRTRWSPKMHRLSEMSRLITGEELPYATLVYVWGNREAPGTVVVNPRTDRIRKLVLDSGTRDVGVWRDHVRDVRADFRLVFGEEPGPLRVVALMTDTDNTRSALTAWYGPLEL 213          
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Match: A0A1B3LVX4_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. RAC07 TaxID=1842537 RepID=A0A1B3LVX4_9BURK)

HSP 1 Score: 311 bits (798), Expect = 2.610e-103
Identity = 157/252 (62.30%), Postives = 188/252 (74.60%), Query Frame = 1
Query:  112 VLLVLALAGCAWQPLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFPGKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVDGLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEELPYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVRADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTL 867
            ++L++ L  C+  P  A+   +  A ++           L  A++R  +TP   + W+ F  PGKR+ VFEPV    RPALRV+A SSVSI R++FEP+L   GR+SFSW+VD LP+ ADLA +  +DS V VVL F+GDRTRW+P+ HRLSEMSRL+TGEELPYA+LVYVW  +E PGTVVVNPRTDRIRKLVLDSGT DVG WRDHVRDVRADFRL FGEEPGPLR+VALMTDTDNT S LTAWYG L L
Sbjct:   26 LVLIVGLVACSAAPERAEGDGEGHAFAQ--------QVALSHAAARHLTTPPSALNWQSFALPGKRHVVFEPVEVLARPALRVKADSSVSIFRRQFEPTLSQPGRISFSWRVDALPEGADLAAADASDSPVGVVLGFEGDRTRWSPKMHRLSEMSRLITGEELPYATLVYVWGNREAPGTVVVNPRTDRIRKLVLDSGTRDVGVWRDHVRDVRADFRLVFGEEPGPLRVVALMTDTDNTRSALTAWYGPLEL 269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7740.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3A4RA15_9BURK4.890e-16982.37DUF3047 domain-containing protein n=1 Tax=Comamona... [more]
A0A6P1J893_9BURK2.810e-13070.48DUF3047 domain-containing protein n=1 Tax=Hydrogen... [more]
UPI0010F439866.580e-12877.54DUF3047 domain-containing protein n=1 Tax=Hydrogen... [more]
A0A6P1IMH5_9BURK4.890e-11164.34DUF3047 domain-containing protein n=1 Tax=Hydrogen... [more]
A0A2W4U3V6_9BURK1.610e-11064.23Uncharacterized protein n=1 Tax=Burkholderiales ba... [more]
A0A1Y2R765_9BURK4.490e-11066.80Uncharacterized protein n=2 Tax=Hydrogenophaga sp.... [more]
UPI0014723FB86.620e-10963.95DUF3047 domain-containing protein n=1 Tax=Hydrogen... [more]
A0A0T2ZBP9_9BURK1.250e-10361.45Uncharacterized protein n=2 Tax=Hydrogenophaga sp.... [more]
UPI0015610E851.550e-10370.42DUF3047 domain-containing protein n=1 Tax=Hydrogen... [more]
A0A1B3LVX4_9BURK2.610e-10362.30Uncharacterized protein n=1 Tax=Hydrogenophaga sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7740contigP-wetherbeei_contig7740:1859..2743 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1100721.ALKO01000017_gene1796
PFAMsDUF3047
Model size885
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.2e-63
EggNOG OGs292MF@1|root,2ZQ5C@2|Bacteria,1RCYR@1224|Proteobacteria,2VRDD@28216|Betaproteobacteria,4AENK@80864|Comamonadaceae
DescriptionProtein of unknown function (DUF3047)
Cds size885
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186998.5862672-CDS-P-wetherbeei_contig7740:1858..27431683186998.5862672-CDS-P-wetherbeei_contig7740:1858..2743Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7740 1859..2743 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7740.3.1prot_P-wetherbeei_contig7740.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7740 1859..2743 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7740.3.1

>prot_P-wetherbeei_contig7740.3.1 ID=prot_P-wetherbeei_contig7740.3.1|Name=mRNA_P-wetherbeei_contig7740.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp
MRRLIYLQHAPATNSLKGLGTSFRESLLRWMGSLVGAVLLVLALAGCAWQ
PLEADDRVDDAAPSRPQRLPGGANAELLKASSRLFSTPAVGVPWEPFFFP
GKRYTVFEPVLASERPALRVRAKSSVSILRQRFEPSLDAVGRLSFSWKVD
GLPKNADLAVSARADSAVRVVLAFDGDRTRWTPRNHRLSEMSRLLTGEEL
PYASLVYVWSLKEPPGTVVVNPRTDRIRKLVLDSGTADVGRWRDHVRDVR
ADFRLAFGEEPGPLRLVALMTDTDNTESQLTAWYGALTLERRAD*
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mRNA from alignment at P-wetherbeei_contig7740:1859..2743+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7740.3.1 ID=mRNA_P-wetherbeei_contig7740.3.1|Name=mRNA_P-wetherbeei_contig7740.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig7740:1859..2743+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGACGTTTGATCTATTTACAACATGCACCCGCCACCAACAGCCTCAA AGGCTTAGGCACGTCTTTCCGGGAAAGCCTTCTGCGCTGGATGGGATCGT TGGTGGGGGCGGTTTTGCTGGTGTTGGCCCTCGCAGGATGTGCGTGGCAG CCCCTTGAGGCAGATGACCGCGTTGACGATGCAGCACCTTCCCGTCCGCA AAGACTCCCTGGTGGCGCCAACGCCGAGCTTCTGAAAGCCTCCAGCCGCT TGTTTTCCACGCCGGCCGTGGGCGTGCCTTGGGAGCCCTTTTTCTTCCCA GGCAAGCGCTATACGGTCTTTGAGCCGGTTCTGGCATCGGAGCGCCCGGC CCTGCGCGTGCGTGCGAAGAGCTCGGTGAGCATCCTGCGCCAGCGGTTTG AGCCATCGCTGGACGCGGTGGGCCGCTTGTCCTTTTCCTGGAAGGTGGAC GGACTGCCCAAGAATGCCGATCTGGCGGTGTCGGCCCGGGCGGACTCCGC CGTGAGGGTCGTGCTGGCTTTTGATGGGGACCGCACTCGATGGACGCCGA GGAACCATCGCCTGTCGGAGATGAGCCGCTTGCTGACGGGCGAGGAATTG CCGTACGCGTCCCTGGTCTACGTGTGGAGCCTCAAGGAGCCGCCGGGCAC TGTTGTGGTGAATCCGCGCACCGACCGCATACGCAAATTGGTGCTCGACA GTGGCACGGCGGACGTGGGTCGCTGGCGCGACCATGTGCGCGACGTACGG GCCGATTTCCGCCTCGCCTTCGGCGAGGAGCCCGGGCCCTTGCGTCTGGT GGCGTTGATGACGGACACCGACAACACCGAGAGCCAGCTCACGGCCTGGT ACGGCGCGCTGACGCTGGAGCGCAGGGCAGACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7740:1859..2743+

>mRNA_P-wetherbeei_contig7740.3.1 ID=mRNA_P-wetherbeei_contig7740.3.1|Name=mRNA_P-wetherbeei_contig7740.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig7740:1859..2743+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGACGTTTGATCTATTTACAACATGCACCCGCCACCAACAGCCTCAA
AGGCTTAGGCACGTCTTTCCGGGAAAGCCTTCTGCGCTGGATGGGATCGT
TGGTGGGGGCGGTTTTGCTGGTGTTGGCCCTCGCAGGATGTGCGTGGCAG
CCCCTTGAGGCAGATGACCGCGTTGACGATGCAGCACCTTCCCGTCCGCA
AAGACTCCCTGGTGGCGCCAACGCCGAGCTTCTGAAAGCCTCCAGCCGCT
TGTTTTCCACGCCGGCCGTGGGCGTGCCTTGGGAGCCCTTTTTCTTCCCA
GGCAAGCGCTATACGGTCTTTGAGCCGGTTCTGGCATCGGAGCGCCCGGC
CCTGCGCGTGCGTGCGAAGAGCTCGGTGAGCATCCTGCGCCAGCGGTTTG
AGCCATCGCTGGACGCGGTGGGCCGCTTGTCCTTTTCCTGGAAGGTGGAC
GGACTGCCCAAGAATGCCGATCTGGCGGTGTCGGCCCGGGCGGACTCCGC
CGTGAGGGTCGTGCTGGCTTTTGATGGGGACCGCACTCGATGGACGCCGA
GGAACCATCGCCTGTCGGAGATGAGCCGCTTGCTGACGGGCGAGGAATTG
CCGTACGCGTCCCTGGTCTACGTGTGGAGCCTCAAGGAGCCGCCGGGCAC
TGTTGTGGTGAATCCGCGCACCGACCGCATACGCAAATTGGTGCTCGACA
GTGGCACGGCGGACGTGGGTCGCTGGCGCGACCATGTGCGCGACGTACGG
GCCGATTTCCGCCTCGCCTTCGGCGAGGAGCCCGGGCCCTTGCGTCTGGT
GGCGTTGATGACGGACACCGACAACACCGAGAGCCAGCTCACGGCCTGGT
ACGGCGCGCTGACGCTGGAGCGCAGGGCAGACTGA
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