mRNA_P-wetherbeei_contig7713.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE) HSP 1 Score: 186 bits (472), Expect = 2.860e-50 Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 202 GSSGSAAVAPARKRAATGAKEPQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
G++G + P R +A K P+K K +TR EKIE A+K Y WWEE E GKQW+ +EHNG +F+ EY+PHGVK+ YDG + LT ++EEVA+FYA++P DGPQL A+ K F KNFF+D++ +LGKGH ++ F DF I+ HLD K K++ TDGE+A AK KE L+ Y +AIVD
Sbjct: 366 GAAGQSRAPPPRTKAQAKDKAPKKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQL--AEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVD 546
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.350e-49 Identity = 84/148 (56.76%), Postives = 111/148 (75.00%), Query Frame = 1
Query: 313 LKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQS--FSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
L+AYKWWEE PL G+QW+H+EHNG++F EYEPHGV ++YDG + L+ E+EE+A+F+A+VP DGPQL +A TAK F NFFSDW+E + GH +++ F KCDF ++ HL Q++L KK+ TDGERA AK EKE +G AIVD
Sbjct: 53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVD 200
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S2CY07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY07_9STRA) HSP 1 Score: 181 bits (459), Expect = 9.860e-49 Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 1
Query: 274 FKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
K M +ME+++ A+KA+KWWE L DG QW +EHNG+ F EYEPHGV +LY G P+ L+ E EE+A+FYA VP+DGPQL + +T F+KNFF+D++++LGK H+VQ F CDF I ++ +QK+ K+ TD E+A K EKE L F YGFAIVD
Sbjct: 179 LKQMNKMERLDQAMKAFKWWEHEDLPDGVQWLGMEHNGLAFPPEYEPHGVPLLYKGEPIELSPELEELATFYAAVPDDGPQLGDPETRTIFQKNFFTDFKKMLGKSHKVQEFKHCDFSRIAANIAEQKMINKAATDVEKANKKREKEELQFKYGFAIVD 337
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI) HSP 1 Score: 179 bits (454), Expect = 9.080e-48 Identity = 90/165 (54.55%), Postives = 117/165 (70.91%), Query Frame = 1
Query: 259 KEPQKFKDMT-RMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
K P+ FK+MT R EKIE A+K Y WWEE E GKQW+ +EHNG +F+ EY+PHGVK+ YDG + LT ++EEVA+FYA++P DGPQL A+ K F KNFF+D++ +LGKGH ++ F DF I+ HLD K K + TDGE+A AK KE L+ Y +AIVD
Sbjct: 332 KAPKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQL--AEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVD 494
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S1CPK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPK8_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.710e-46 Identity = 74/162 (45.68%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 265 PQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
P+K K +T EK++ A+ +YKWW++ L G W +EH GV FS EY PHG++M YDG P+ LT +EEVA++YA VP DGP L + +TA+ F +NFF DWRELLG+ HE+Q F KC+F PI+ ++ +++ KK+ T E+ ++ + YG+ VD
Sbjct: 35 PKKKKALTATEKLDLAMTSYKWWDDEELPKGINWRTLEHCGVAFSDEYTPHGIRMFYDGKPVELTPAQEEVATWYATVPPDGPHLGKPETAEIFNRNFFRDWRELLGEHHEIQEFEKCNFDPIRAYVQEEREKKKAMTKEEKEENSKTRKQMQLKYGYCFVD 196
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA) HSP 1 Score: 172 bits (437), Expect = 8.550e-46 Identity = 77/160 (48.12%), Postives = 116/160 (72.50%), Query Frame = 1
Query: 271 KFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
K K T++E+++ A+K+YKWWE L G+QW +EHNG+ F EY+PHGV + Y+G LVL + EE+A+FY VP+DGPQL + +T F+KNFF+D+++ LG HE++ F CDF I+EH+++++L KK+ T+ E+ AK EK++L F YG+A+VD
Sbjct: 140 KLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVD 299
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A418F2Z5_9STRA (Topoisom_I_N domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F2Z5_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.390e-45 Identity = 76/161 (47.20%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 268 QKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
+K K ++ E+++ A+KAY+WW L +G QW +EHNGV F YEPHG+ +LYDG P+ LT E+EE+ASF+A +P DGPQL TA F KNFF+D++ LGK H ++ KC+F I+ HL + KK RT E+A K +K+ L+ +GFAI+D
Sbjct: 103 RKLKVQSKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPVLYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCNFDKIQAHLADLRDVKKDRTKEEKAPEKVKKDEELYRHGFAIID 263
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S2MAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAS9_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.200e-45 Identity = 78/164 (47.56%), Postives = 108/164 (65.85%), Query Frame = 1
Query: 259 KEPQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
KE + K + + E+I HA++AY WW G+QW +EH GV+F YEPHGVKM YDG + LT EEE A+F+A + DG L + TA F+KNFF+D++ +LGK H ++ F KCDF PI HLD+QK+ +K+ TD ER K K+T +F +G+A+VD
Sbjct: 115 KEVKGLKQLDKSERISHAMQAYLWWNADDPPKGQQWCKMEHAGVSFPEGYEPHGVKMRYDGKEVDLTPVEEEAATFFAAMDPDGMHLGNSKTAPIFKKNFFTDFKAILGKNHVIKDFKKCDFTPITAHLDEQKIVRKAITDAERKQNKNVKDTAMFKFGYALVD 278
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.140e-44 Identity = 78/161 (48.45%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 268 QKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
+K K + E+++ A+KAY+WW L +G QW +EHNGV F YEPHG+ ++YDG P+ LT E+EE+ASF+A +P DGPQL TA F KNFF+D+R LGK H ++ KC+F I+ HL++ + AKK RT E+A K +K+ L+ +GFAIVD
Sbjct: 105 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVD 265
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: K3WII9_GLOUD (DNA topoisomerase I n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WII9_GLOUD) HSP 1 Score: 167 bits (424), Expect = 4.360e-44 Identity = 86/179 (48.04%), Postives = 118/179 (65.92%), Query Frame = 1
Query: 214 SAAVAPARKRAATGAKEPQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 750
SA+ + AR + GA +K K ++ E+++ A+KAY+WW L +G QW +EHNGV F Y PH V M+YDG + LTA +EE+ASFYA +P+DGPQL AK F +NFF+D+R+ LGK HEV+ F CDF I +L++Q+ KK+ T E+A K +KE LFT GFA+VD
Sbjct: 129 SASDSKARVKKENGAASMRKLKVHSKAERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVMFPPAYIPHHVPMVYDGKEVKLTATQEEIASFYAAIPKDGPQLGTPTIAKKFNQNFFADFRKALGKNHEVKKFELCDFSKIAAYLEEQREEKKNMTKDEKAPEKEKKEMELFTNGFAVVD 307 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7713.2.1 >prot_P-wetherbeei_contig7713.2.1 ID=prot_P-wetherbeei_contig7713.2.1|Name=mRNA_P-wetherbeei_contig7713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp DGDFEPRKKKAAAASKKRARPASSDSDGGGDNSDDGSDAKPAKGKGKGKRback to top mRNA from alignment at P-wetherbeei_contig7713:1049..2932+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7713.2.1 ID=mRNA_P-wetherbeei_contig7713.2.1|Name=mRNA_P-wetherbeei_contig7713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1884bp|location=Sequence derived from alignment at P-wetherbeei_contig7713:1049..2932+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7713:1049..2932+ >mRNA_P-wetherbeei_contig7713.2.1 ID=mRNA_P-wetherbeei_contig7713.2.1|Name=mRNA_P-wetherbeei_contig7713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig7713:1049..2932+ (Phaeothamnion wetherbeei SAG_119_79)back to top |