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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1575 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 825 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186995.1637886-UTR-P-wetherbeei_contig77:13243..13691 | 1683186995.1637886-UTR-P-wetherbeei_contig77:13243..13691 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig77 13244..13691 - |
| 1683186995.2033956-UTR-P-wetherbeei_contig77:15009..15311 | 1683186995.2033956-UTR-P-wetherbeei_contig77:15009..15311 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig77 15010..15311 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186995.1758661-CDS-P-wetherbeei_contig77:13691..13934 | 1683186995.1758661-CDS-P-wetherbeei_contig77:13691..13934 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig77 13692..13934 - |
| 1683186995.1845682-CDS-P-wetherbeei_contig77:14164..14608 | 1683186995.1845682-CDS-P-wetherbeei_contig77:14164..14608 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig77 14165..14608 - |
| 1683186995.1935327-CDS-P-wetherbeei_contig77:14871..15009 | 1683186995.1935327-CDS-P-wetherbeei_contig77:14871..15009 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig77 14872..15009 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig77.12.1 >prot_P-wetherbeei_contig77.12.1 ID=prot_P-wetherbeei_contig77.12.1|Name=mRNA_P-wetherbeei_contig77.12.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
MASFSQGLTCRNYEEALLTDCKFKEDDARYTSIAEQCDVNYTKPIDYTVG
ASLLFDVYTETQALDQALLEQIAELLNLGGTGMLSVSEVAPLDRGTGGFA
DPPVRVIVEVAADAENHDSIVAMLAAADATGKLSALLYAVDEDGNLLIPQ
LEGTTLMGLGVETSDAEVPIPAKIQELLDAIDSGEKTEDEVIDEINGVNH
VDETSASSSSDSKTDGSEDVDKSGSGSSSGGGSNGLPTIAIAGICIGALL
LVGVGVVVARKSRAKKAPVAGSKV* back to topmRNA from alignment at P-wetherbeei_contig77:13244..15311- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig77.12.1 ID=mRNA_P-wetherbeei_contig77.12.1|Name=mRNA_P-wetherbeei_contig77.12.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2068bp|location=Sequence derived from alignment at P-wetherbeei_contig77:13244..15311- (Phaeothamnion wetherbeei SAG_119_79)
AGTACACGCTGTCGTGGATCGATGTCGTCGGCAAGGAGCGCCTACAGCTG
TCCGCCGGTAAGATCTGGCAGGCCGAGACCAACGAGGACTCCTTCGTGCT
GCCCGCCGGCTGCTACGTGGTCGAGTCGTACTCGTCGGCTGACCCCGGCG
CGGCGAGCAACGCCTTCTCCTGGAACATTACCGGAACGACCATCGTCGGG
CAGGTCTATGACGAGGCCACGTTCTCCGTCGGAGGCGCCTTCTGCGACCT
GACCGCGCCTGACTATTCGTGCCTGCTGTCGCGGACCTTCGAGGGCAATG
AGATGGCGAGCTTCTCGCAGGGGCTGACGTGCCGCAACTACGAGGAAGCA
TTGCTGACGGACTGCAAGTTCAAGGAGGACGACGCGCGGTACACGAGCAT
CGCCGAGCAGTGCGATGTCAACTACACCAAGCCCATTGACGTGAGCGAGC
AGCGCGGCTTCTCTCGTTTGGGCATTTCTTTTAATTTTGCGGGTCTAAAG
CTTTGAAACCGCCTGTATCATGTGGTTGCTTTGAACACTTCTCCGGTGTT
CTTGCGGCAGCCGCAGCTCTGCTGATACTGCCGCTGTGTCTGCTTTCCAT
GCGTTTCTTCGTCCTTTCCCGTTCTCCCATTACCTAAGCCTCATTATTTC
TGCCGCGCCCATCCGCGTGCCCGTTGCCCCTCTCTCCGCATTCACCCTGG
CAGTACACCGTCGGGGCGTCGCTGCTCTTCGACGTGTACACCGAGACGCA
AGCCCTCGATCAGGCCCTCCTGGAGCAGATCGCCGAACTCCTCAACCTTG
GCGGCACTGGCATGCTCTCCGTCTCCGAGGTGGCGCCGCTGGACCGCGGC
ACCGGCGGCTTCGCCGACCCGCCCGTCCGCGTCATCGTCGAGGTGGCCGC
CGACGCCGAGAACCATGACAGTATCGTGGCGATGCTCGCCGCCGCCGACG
CCACTGGCAAGCTCTCGGCGCTGCTGTACGCCGTGGACGAGGACGGCAAC
CTGCTCATCCCGCAGCTGGAGGGCACGACATTGATGGGCCTCGGCGTGGA
GACGTCGGACGCCGAGGTGCCAATCCCGGCTAAGATTCAGGAGCTGCTCG
ATGCCATCGACAGTGGCGAGAAGACCGAGGACGAGGTCATTGATGAGGCA
AGTTCTTCGTTCTCCTTTTTCGTGGTTTCTGCTTCCAATTGAGAAAGGAG
TTTTTGGTCATGAACGGAGCTGTGGCTGGAAAGAAAAACGACGGGTGGAA
ATCTGATGGAGGGCGGTAGCAGCTCCTTCTGAATTTCAAAGCTCTGTAAG
CCTACTCAACCTTAGCTCTCCCGCCAGCTGCTCGCCGCTGCCACCGTCTC
CGCCCGTCCCACTTCGCCTCCTGGCAGATCAACGGCGTGAACCATGTGGA
CGAGACCTCGGCCTCCTCGAGCAGCGACTCTAAGACGGACGGCAGCGAGG
ACGTCGACAAGTCGGGAAGCGGGAGCAGCAGCGGCGGCGGGAGCAACGGC
CTGCCGACCATCGCCATCGCCGGCATCTGCATAGGCGCGCTCCTGCTCGT
AGGTGTCGGTGTCGTCGTCGCCCGCAAGAGCCGCGCGAAGAAGGCGCCCG
TCGCCGGCTCCAAGGTCTAAAATCCTTACCCCAAGGTGGCTGGCTCGGAG
GAAGCTCGGTCCGGGCTTCAAAGTGCGTCCTTCAAAGGTTCAAAGCTTCA
GAGCTGCTTACAGGCGCAGTATTTAACGGTGGGGCGGGACGTTGCCGCGG
TGGCGGGGGCGGTGGCGGCAACGATGGACGTTGCGCTGCTGGCCCCCGCC
ATGTCAACTGCTCCCTGCCTCGGAAACTGCCTAGGCAGTCTGGTGATTTC
TTTATTGTGCGTGGTGCCGGACATATGTTGTCAACGGCGTCAGTGGGTGC
TGGCCCGAGCCTGGCGTAAACTAGAGCACACACACGCAGAAGCAAAAACG
ACATAAAGTTGAGTTTAATCGGAGAAGTATTGCATCGCAATGGCGAGGAG
GAGGGGGCGGGGCCACGTGGACACAAGCAGCTGTGGTGGGACCGGCAGGC
AAAACATTAACACGACGA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig77:13244..15311- >mRNA_P-wetherbeei_contig77.12.1 ID=mRNA_P-wetherbeei_contig77.12.1|Name=mRNA_P-wetherbeei_contig77.12.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig77:13244..15311- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGAGCTTCTCGCAGGGGCTGACGTGCCGCAACTACGAGGAAGCATT
GCTGACGGACTGCAAGTTCAAGGAGGACGACGCGCGGTACACGAGCATCG
CCGAGCAGTGCGATGTCAACTACACCAAGCCCATTGACTACACCGTCGGG
GCGTCGCTGCTCTTCGACGTGTACACCGAGACGCAAGCCCTCGATCAGGC
CCTCCTGGAGCAGATCGCCGAACTCCTCAACCTTGGCGGCACTGGCATGC
TCTCCGTCTCCGAGGTGGCGCCGCTGGACCGCGGCACCGGCGGCTTCGCC
GACCCGCCCGTCCGCGTCATCGTCGAGGTGGCCGCCGACGCCGAGAACCA
TGACAGTATCGTGGCGATGCTCGCCGCCGCCGACGCCACTGGCAAGCTCT
CGGCGCTGCTGTACGCCGTGGACGAGGACGGCAACCTGCTCATCCCGCAG
CTGGAGGGCACGACATTGATGGGCCTCGGCGTGGAGACGTCGGACGCCGA
GGTGCCAATCCCGGCTAAGATTCAGGAGCTGCTCGATGCCATCGACAGTG
GCGAGAAGACCGAGGACGAGGTCATTGATGAGATCAACGGCGTGAACCAT
GTGGACGAGACCTCGGCCTCCTCGAGCAGCGACTCTAAGACGGACGGCAG
CGAGGACGTCGACAAGTCGGGAAGCGGGAGCAGCAGCGGCGGCGGGAGCA
ACGGCCTGCCGACCATCGCCATCGCCGGCATCTGCATAGGCGCGCTCCTG
CTCGTAGGTGTCGGTGTCGTCGTCGCCCGCAAGAGCCGCGCGAAGAAGGC
GCCCGTCGCCGGCTCCAAGGTCTAA back to top
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