mRNA_P-wetherbeei_contig12890.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12890.1.1
Unique NamemRNA_P-wetherbeei_contig12890.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: D8LBI0_ECTSI (Phosphoribulokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI0_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 1.440e-132
Identity = 189/224 (84.38%), Postives = 205/224 (91.52%), Query Frame = 1
Query:    1 PGSVSAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            PG++S     RL+A SMKLG DEKVVL+GVAADSGCGKSTFMRRLT+IFGG +VGPLGGGF  GGWETN+LVSDLTTV+CLDDYHLNDRGGRKVSGRTALHT EQ+FDLMYE L  LK GK+VMKPIYNHVNGTLDTPEEIK TPIVI+EGLHPFVD RV +LLDF IYLDISDEIKFAWKIQRDMMERGHSLESI+ASIEARKPDFDAFIAPQR++ADVV+QV
Sbjct:   59 PGTMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDKRVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQV 282          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: Q9ATC3_VAULI (Phosphoribulokinase n=3 Tax=Eukaryota TaxID=2759 RepID=Q9ATC3_VAULI)

HSP 1 Score: 377 bits (969), Expect = 1.350e-128
Identity = 187/215 (86.98%), Postives = 198/215 (92.09%), Query Frame = 1
Query:   31 RLDAFSMKLG-VDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            +L A  MKLG  DE VV++GVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFG GGWETNTLVSDLTTVICLDDYHLNDR GRKVSGRTALHT EQ+FDLM E L ALK G++VMKPIYNHVNGTLDTPEE+K TPIVI+EGLHPFVD RV +LLDF IYLDISDEIKFAWKIQRDMMERGHSLESI+ASIEARKPDFDA+IAPQRAQADVVLQV
Sbjct:   45 KLQALEMKLGDPDEPVVIIGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRNGRKVSGRTALHTDEQKFDLMTEQLSALKRGESVMKPIYNHVNGTLDTPEEVKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQV 259          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A836CLK3_9STRA (Phosphoribulokinase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK3_9STRA)

HSP 1 Score: 371 bits (952), Expect = 6.280e-126
Identity = 187/224 (83.48%), Postives = 199/224 (88.84%), Query Frame = 1
Query:    7 SVSAGTLQRLDAFSMKLG-VDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGK-GGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            S S+    R  A  MKLG  DE +V++GVAADSGCGKSTFMRRLTNIFGGS+VGPLGGGFG  GGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLM E L ALK G +V KPIYNHVNGTLD PEEIK TPI+I+EGLHPFVD RV +LLDF IYLDISDEIKFAWKIQRDM+ERGHSLESI+ASIEARKPDFDA+IAPQRAQADVVLQV
Sbjct:   40 STSSKAAARWQALQMKLGDADEPIVVIGVAADSGCGKSTFMRRLTNIFGGSTVGPLGGGFGAPGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMAEQLAALKRGDSVKKPIYNHVNGTLDEPEEIKPTPIIIIEGLHPFVDQRVRDLLDFTIYLDISDEIKFAWKIQRDMLERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQV 263          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S2Y062_9STRA (Phosphoribulokinase n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S2Y062_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.450e-116
Identity = 172/225 (76.44%), Postives = 191/225 (84.89%), Query Frame = 1
Query:    1 PGSVSAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFG-KGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            P SVS  T  RL  F  KL   E+VVL+GVAADSGCGKSTFMRRLTN+FGG++VGPLGGGFG +GGWETNTLVSD TTVICLDDYHLNDR GRKVSG TAL+T E  FDLMYE LK LK GK + KPIYNHVNGTLDTPE I+ TPIVI+EGLHP  D RV ELLDF +YLDISD++KFAWKIQRDM ERGHSLESI+ASIEARKPDFDA++APQ+  ADVV++V
Sbjct:   43 PTSVSKRTGSRLQNFVAKLADGEQVVLIGVAADSGCGKSTFMRRLTNVFGGTNVGPLGGGFGAEGGWETNTLVSDTTTVICLDDYHLNDRNGRKVSGLTALNTLENNFDLMYEQLKELKSGKTISKPIYNHVNGTLDTPETIEPTPIVIIEGLHPMHDERVRELLDFSMYLDISDDVKFAWKIQRDMEERGHSLESIQASIEARKPDFDAYVAPQKQYADVVIEV 267          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: F8LSX2_LEPCH (Phosphoribulokinase (Fragment) n=1 Tax=Lepidodinium chlorophorum TaxID=107758 RepID=F8LSX2_LEPCH)

HSP 1 Score: 344 bits (883), Expect = 1.090e-115
Identity = 164/206 (79.61%), Postives = 184/206 (89.32%), Query Frame = 1
Query:   55 LGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            LG DE VV++GVAADSGCGKSTFMRRLTN+FGG  VGPLGGGFG GGWETNTLVSD TTVICLDDYHL+DR GRKVS RTAL TAEQ+FDLMYE + ALK G+ + KPIYNHVNGTLD PE IK TPIVI+EGLHPFVD RV +L+DF IYLDI+D++KFAWKI+RDM ERGHSLESIKASIEARKPDFDA++APQRA +D+V+QV
Sbjct:  112 LGKDEPVVVIGVAADSGCGKSTFMRRLTNVFGGEQVGPLGGGFGGGGWETNTLVSDQTTVICLDDYHLDDRQGRKVSKRTALDTAEQKFDLMYEQIAALKRGETIKKPIYNHVNGTLDEPETIKPTPIVIIEGLHPFVDERVRKLIDFSIYLDITDDVKFAWKIRRDMQERGHSLESIKASIEARKPDFDAYVAPQRANSDLVIQV 317          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S3ZKD2_9STRA (Phosphoribulokinase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKD2_9STRA)

HSP 1 Score: 341 bits (875), Expect = 1.790e-114
Identity = 165/208 (79.33%), Postives = 179/208 (86.06%), Query Frame = 1
Query:   49 MKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            M +  D  VVL+GVAADSGCGKSTFMRRLT IFGG++VGPLGGGF  GGWETNTLVSD TTVICLDDYHLNDRGGRKV+GRTAL  AE  FDLMYE LK LK G  + KPIYNHVNGTLDTPEEI  T IVIVEGLHP  DPRV ELLDF +YLDI+D++KFAWKIQRDM+ERGHSLESI+ SIEARKPDFDAF+APQR  ADVV+QV
Sbjct:   35 MTMAADGGVVLIGVAADSGCGKSTFMRRLTGIFGGTNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHLNDRGGRKVTGRTALDLAENNFDLMYEQLKELKAGNAIKKPIYNHVNGTLDTPEEITPTQIVIVEGLHPMADPRVRELLDFSLYLDITDDVKFAWKIQRDMVERGHSLESIQQSIEARKPDFDAFVAPQRGDADVVIQV 242          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A5JEM0_HETAK (Phosphoribulokinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A5JEM0_HETAK)

HSP 1 Score: 337 bits (863), Expect = 1.000e-112
Identity = 165/211 (78.20%), Postives = 180/211 (85.31%), Query Frame = 1
Query:   40 AFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            A  M L   E+VVL+GVAADSGCGKSTFMRRLT +FG   V  LGGGFG GGWETNTLVS  TTVICLDDYHLNDR GRKVSG TALH  E  FDLMYE LK LK GK + KPIYNHVNGTLDTPEE++ TPIVIVEGLHP +D RV ELLDF+IYLDISDEIKFAWKIQRDM ERGHSLESIKASIEARKPDF+AF++PQRA++D+V+QV
Sbjct:   35 ALQMALKEGEEVVLIGVAADSGCGKSTFMRRLTGMFGTDGVQMLGGGFGNGGWETNTLVSPSTTVICLDDYHLNDRNGRKVSGLTALHEKENNFDLMYEQLKELKSGKTIKKPIYNHVNGTLDTPEEVEPTPIVIVEGLHPMLDDRVAELLDFRIYLDISDEIKFAWKIQRDMEERGHSLESIKASIEARKPDFEAFVSPQRAKSDIVIQV 245          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S2WLY4_9STRA (Phosphoribulokinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLY4_9STRA)

HSP 1 Score: 335 bits (860), Expect = 4.490e-112
Identity = 162/216 (75.00%), Postives = 184/216 (85.19%), Query Frame = 1
Query:   25 LQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            +Q   A  M L   E  +++G+AADSGCGKSTFMRR+T+ FGG  VGPLGGGFG GGWETNTLVSDLTTVICLDDYHLNDR GRKVSG TAL+TAEQ+FDLMYEH+KALKEGK+VMKPIYNHVNGTLD PE+I+ TPI+I+EGLHPF D RV EL+DF +YLDIS ++K  WKIQRDM ERGHSLESI ASIEARKPDFDAFI PQ+  AD V++V
Sbjct:   38 VQSGSAMQMALKEGEVPIIIGLAADSGCGKSTFMRRVTSTFGGDVVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRQGRKVSGLTALNTAEQKFDLMYEHVKALKEGKSVMKPIYNHVNGTLDEPEKIEPTPIIIIEGLHPFHDDRVRELIDFSLYLDISPDVKLNWKIQRDMEERGHSLESIMASIEARKPDFDAFIEPQKKYADYVIEV 253          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A7S2JQY6_9STRA (Phosphoribulokinase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQY6_9STRA)

HSP 1 Score: 330 bits (846), Expect = 5.110e-112
Identity = 159/220 (72.27%), Postives = 183/220 (83.18%), Query Frame = 1
Query:   13 SAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            S+ ++Q   +  M L   EK +L+GVAADSGCGKSTFMRRLTNIFGG  VGPLGGGF  GGWETN+LVSDLTTV+CLDDYHLNDRGGRKVSG TAL+  E  FDLM+E +K LK GK++ KPIYNHVNGTLDTPE I+ TPI+I+EGLHP  D RV +LLDF +YLDISDE+K  WKIQRDM ERGHSLESI ASIEARKPDFDA+IAPQ+A AD+ ++V
Sbjct:   25 SSVSVQSTSSLQMALKEGEKPILIGVAADSGCGKSTFMRRLTNIFGGERVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGLTALNPLENNFDLMFEQMKDLKAGKSISKPIYNHVNGTLDTPETIEPTPIIIIEGLHPMHDERVRDLLDFSLYLDISDEVKLNWKIQRDMEERGHSLESILASIEARKPDFDAYIAPQKAFADICIEV 244          
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Match: A0A4D9D820_9STRA (Phosphoribulokinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D820_9STRA)

HSP 1 Score: 335 bits (858), Expect = 9.320e-112
Identity = 162/208 (77.88%), Postives = 178/208 (85.58%), Query Frame = 1
Query:   49 MKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVEGLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASIEARKPDFDAFIAPQRAQADVVLQV 672
            MKLG D+KV+L+GVAADSGCGKSTFMRRLTNIFGGS+VGPLGGGF  GGWETNTLVSD TTVICLDDYH NDR GRKV+GRTAL  AEQ FDLMYE LKALKEGK V KPIYNHVNGTLD PEE+  TPIVIVEGLHP+ D RV +LLD+ IYLDISDEIK AWKIQRDM ERG +LE ++A IE RKPDF+ F+ PQ+  AD V+QV
Sbjct:   47 MKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQV 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12890.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBI0_ECTSI1.440e-13284.38Phosphoribulokinase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
Q9ATC3_VAULI1.350e-12886.98Phosphoribulokinase n=3 Tax=Eukaryota TaxID=2759 R... [more]
A0A836CLK3_9STRA6.280e-12683.48Phosphoribulokinase n=2 Tax=Tribonema minus TaxID=... [more]
A0A7S2Y062_9STRA1.450e-11676.44Phosphoribulokinase n=2 Tax=Eukaryota TaxID=2759 R... [more]
F8LSX2_LEPCH1.090e-11579.61Phosphoribulokinase (Fragment) n=1 Tax=Lepidodiniu... [more]
A0A7S3ZKD2_9STRA1.790e-11479.33Phosphoribulokinase n=3 Tax=Pelagomonas calceolata... [more]
A5JEM0_HETAK1.000e-11278.20Phosphoribulokinase n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S2WLY4_9STRA4.490e-11275.00Phosphoribulokinase n=1 Tax=Rhizochromulina marina... [more]
A0A7S2JQY6_9STRA5.110e-11272.27Phosphoribulokinase (Fragment) n=1 Tax=Leptocylind... [more]
A0A4D9D820_9STRA9.320e-11277.88Phosphoribulokinase n=1 Tax=Nannochloropsis salina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12890contigP-wetherbeei_contig12890:136..1189 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LBI0
Preferred namePRK
PFAMsPRK
Model size672
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00855
KEGG ReactionR01523
KEGG Pathwayko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200
KEGG ModuleM00165,M00166
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004849,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008655,GO:0008974,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010319,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0019899,GO:0019904,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034404,GO:0034641,GO:0034654,GO:0042221,GO:0042455,GO:0042651,GO:0042742,GO:0042802,GO:0042803,GO:0043094,GO:0043097,GO:0043174,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046983,GO:0048046,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097718,GO:0098542,GO:0099080,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Exons2
Evalue2.37e-133
EggNOG OGsCOG0572@1|root,KOG4203@2759|Eukaryota
Ec32 ortholog descriptionPhosphoribulokinase
Ec32 orthologEc-27_003910.1
EC2.7.1.19
DescriptionUMP salvage
Cds size672
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185965.2143333-CDS-P-wetherbeei_contig12890:135..7351683185965.2143333-CDS-P-wetherbeei_contig12890:135..735Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12890 136..735 -
1683185965.2244658-CDS-P-wetherbeei_contig12890:1117..11891683185965.2244658-CDS-P-wetherbeei_contig12890:1117..1189Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12890 1118..1189 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12890.1.1prot_P-wetherbeei_contig12890.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12890 136..1189 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12890.1.1

>prot_P-wetherbeei_contig12890.1.1 ID=prot_P-wetherbeei_contig12890.1.1|Name=mRNA_P-wetherbeei_contig12890.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
PGSVSAGTLQRLDAFSMKLGVDEKVVLVGVAADSGCGKSTFMRRLTNIFG
GSSVGPLGGGFGKGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTAL
HTAEQRFDLMYEHLKALKEGKNVMKPIYNHVNGTLDTPEEIKATPIVIVE
GLHPFVDPRVNELLDFKIYLDISDEIKFAWKIQRDMMERGHSLESIKASI
EARKPDFDAFIAPQRAQADVVLQV
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mRNA from alignment at P-wetherbeei_contig12890:136..1189-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12890.1.1 ID=mRNA_P-wetherbeei_contig12890.1.1|Name=mRNA_P-wetherbeei_contig12890.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1054bp|location=Sequence derived from alignment at P-wetherbeei_contig12890:136..1189- (Phaeothamnion wetherbeei SAG_119_79)
CCTGGCTCCGTCAGCGCCGGGACATTGCAACGATTGGATGCCTTCTCGAT GAAGCTCGGCGTGGATGAGAAGGTGGGCATGATGTTCTTTGCATGCACGC ACGCCATGTTCCTTGGGCAAATTTTCCGTCAGGGGAGGAATCGGACTTCG ATTCTTGATGCATAAGACAAGTTGTCATGTACGCCGCCGACGCCGTGTCT TGCTTCTAGCGGAGGCAGCAAATTCCCTGGGGTTTGGGGTGCTTTCTCGC TGGCTTTCTGCGGGAAGGGTGAAGCACAGGCGAAGCCTTTTCCTCTGCGC GCCTTGTTGTGAAAGTGTTTAAACCTACTCGACTCAGAAACTATTGAAAG CTTTGTTTGAGTCCGTGTTTCTATTTTGCTTCTTTGCGGTGCCGCTCTAA CTGCTGCTTCTCTCATTTCCTCTGGTCTGTCCACCTGTGCCTTTTCATTT CCAGGTTGTGCTCGTGGGCGTTGCGGCCGACTCGGGATGCGGCAAGTCGA CCTTCATGCGGCGGCTGACGAACATCTTCGGCGGTTCCTCGGTCGGGCCA CTCGGCGGCGGATTCGGCAAGGGCGGGTGGGAAACCAACACGCTCGTCTC CGACCTGACGACGGTCATCTGCCTCGACGACTACCACCTGAACGACCGCG GCGGCCGGAAGGTGTCCGGGCGCACGGCGTTGCACACGGCGGAGCAGCGG TTCGACCTCATGTACGAGCACCTCAAAGCCCTGAAGGAGGGAAAGAACGT TATGAAGCCAATCTACAATCACGTCAACGGCACGCTCGACACGCCCGAAG AGATCAAGGCGACGCCAATCGTCATCGTGGAGGGGCTGCACCCCTTTGTT GACCCGCGCGTGAACGAGCTTTTGGACTTCAAGATCTACCTCGACATCTC CGACGAGATCAAGTTCGCCTGGAAGATCCAGCGAGACATGATGGAGCGCG GCCACTCGCTCGAGTCCATCAAGGCATCCATCGAGGCGCGCAAGCCCGAC TTTGACGCCTTCATTGCCCCGCAGCGCGCCCAGGCCGACGTTGTGCTGCA GGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12890:136..1189-

>mRNA_P-wetherbeei_contig12890.1.1 ID=mRNA_P-wetherbeei_contig12890.1.1|Name=mRNA_P-wetherbeei_contig12890.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig12890:136..1189- (Phaeothamnion wetherbeei SAG_119_79)
CCTGGCTCCGTCAGCGCCGGGACATTGCAACGATTGGATGCCTTCTCGAT
GAAGCTCGGCGTGGATGAGAAGGTTGTGCTCGTGGGCGTTGCGGCCGACT
CGGGATGCGGCAAGTCGACCTTCATGCGGCGGCTGACGAACATCTTCGGC
GGTTCCTCGGTCGGGCCACTCGGCGGCGGATTCGGCAAGGGCGGGTGGGA
AACCAACACGCTCGTCTCCGACCTGACGACGGTCATCTGCCTCGACGACT
ACCACCTGAACGACCGCGGCGGCCGGAAGGTGTCCGGGCGCACGGCGTTG
CACACGGCGGAGCAGCGGTTCGACCTCATGTACGAGCACCTCAAAGCCCT
GAAGGAGGGAAAGAACGTTATGAAGCCAATCTACAATCACGTCAACGGCA
CGCTCGACACGCCCGAAGAGATCAAGGCGACGCCAATCGTCATCGTGGAG
GGGCTGCACCCCTTTGTTGACCCGCGCGTGAACGAGCTTTTGGACTTCAA
GATCTACCTCGACATCTCCGACGAGATCAAGTTCGCCTGGAAGATCCAGC
GAGACATGATGGAGCGCGGCCACTCGCTCGAGTCCATCAAGGCATCCATC
GAGGCGCGCAAGCCCGACTTTGACGCCTTCATTGCCCCGCAGCGCGCCCA
GGCCGACGTTGTGCTGCAGGTG
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