mRNA_P-wetherbeei_contig1289.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A7S2VVC1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVC1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.000e-16 Identity = 66/88 (75.00%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC H+ CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 191 RQQVLRHQQQRLLLLRHAAKCPHENGKCPVTPHCAGMKRLWKHIAECKDQKCQVXXXXXXXXXXXXXXXXXXXXXPVCMPVREAIHRS 278
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A835YP23_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP23_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.050e-16 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 1560 PERRAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 PERRAQ+L QQQQRLLLLRHASKC + P C TPHCA M++LWRHIAECK+ KC +XXXXXXXXXXXXXXXXXXXXX VC PVR++I N Sbjct: 864 PERRAQVLRQQQQRLLLLRHASKCVLEAP-CAVTPHCAAMKKLWRHIAECKDQKCPMXXXXXXXXXXXXXXXXXXXXXXVCGPVRDAIQEN 953
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A448Z166_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z166_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.410e-16 Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC HD CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 352 RQQVLRHQQQRLLLLRHAAKCQHDDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 439
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A6U3SN67_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SN67_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.740e-16 Identity = 67/91 (73.63%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 1560 PERRAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 P R Q+L QQQRLLLLRHA+KC H CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 61 PSDRQQVLRHQQQRLLLLRHAAKCPHQDNQCPVTPHCAGMKRLWKHIAECKDQKCMVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 151
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A7S4WAS7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WAS7_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.750e-16 Identity = 66/88 (75.00%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC H+ CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 261 RQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 348
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A7S4AKT6_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKT6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.090e-16 Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC HD CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 144 RQQVLRHQQQRLLLLRHAAKCQHDDGLCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 231
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: B7FZQ7_PHATC (Histone acetyltransferase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FZQ7_PHATC) HSP 1 Score: 93.6 bits (231), Expect = 5.370e-16 Identity = 66/88 (75.00%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC H+ CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 323 RQQVLRHQQQRLLLLRHAAKCQHEDGKCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 410
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A6S8EE49_9STRA (Histone acetyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EE49_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 6.530e-16 Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 3 Query: 1563 ERRAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 ++R Q+L Q RLLLLRHASKC HD +CP TPHCA M++LW+HIAECK+ +C XXXXXXXXXXXXXXXXXXXXAVC PVR++I RN Sbjct: 190 DQRQQVLRQXXXRLLLLRHASKCPHDNGNCPVTPHCAGMKKLWKHIAECKDQQCQTAXXXXXXXXXXXXXXXXXXXXAVCGPVRDAIQRN 279
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A7S2UKV4_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKV4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.110e-16 Identity = 66/88 (75.00%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC H+ CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 387 RQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 474
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Match: A0A7S2R3Z8_9STRA (Histone acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 9.180e-16 Identity = 66/88 (75.00%), Postives = 75/88 (85.23%), Query Frame = 3 Query: 1569 RAQLLEQQQQRLLLLRHASKCSHDGPDCPATPHCATMRRLWRHIAECKELKCDVXXXXXXXXXXXXXXXXXXXXXAVCSPVRESINRN 1832 R Q+L QQQRLLLLRHA+KC H+ CP TPHCA M+RLW+HIAECK+ KC VXXXXXXXXXXXXXXXXXXXXX VC PVRE+I+R+ Sbjct: 48 RQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRS 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1289.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1289.1.1 >prot_P-wetherbeei_contig1289.1.1 ID=prot_P-wetherbeei_contig1289.1.1|Name=mRNA_P-wetherbeei_contig1289.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=596bp MGLPGADMELRRQASMPPAASTPMMRTEEMLTLAASDSAVRPGGGGGGVGback to top mRNA from alignment at P-wetherbeei_contig1289:334..2205- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1289.1.1 ID=mRNA_P-wetherbeei_contig1289.1.1|Name=mRNA_P-wetherbeei_contig1289.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1872bp|location=Sequence derived from alignment at P-wetherbeei_contig1289:334..2205- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1289:334..2205- >mRNA_P-wetherbeei_contig1289.1.1 ID=mRNA_P-wetherbeei_contig1289.1.1|Name=mRNA_P-wetherbeei_contig1289.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1788bp|location=Sequence derived from alignment at P-wetherbeei_contig1289:334..2205- (Phaeothamnion wetherbeei SAG_119_79)back to top |