mRNA_P-wetherbeei_contig761.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig761.3.1
Unique NamemRNA_P-wetherbeei_contig761.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA)

HSP 1 Score: 736 bits (1900), Expect = 1.890e-260
Identity = 400/586 (68.26%), Postives = 456/586 (77.82%), Query Frame = 1
Query:    1 MWSFFGGSKPTPLEEAKKAVAEAEKXXXXXXXXKGNEKAQYSGSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGGARPITVEGVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWWLNRARAXXXXGPAFLPPAL 1758
            M  FF     TP E A   +A A          K  +     G GFDPTGLERAAKAAR L+ S NS  IL+L++ Q   KAEEH+            QE+E +  +AEEAR+TL AQTE  K+ A+Y DQLER+RY+D +NA+R +RE E  RQE        ++RKTLEYEA LR++TELARVKAETEGRI+QER+NHDLRLEEAR+ A EYRDTVLEGIKLAGETLG G++ FLGD+E+M AAT T+TA+A+GIYTAK GTGVAGRY+EARLGKPSLVRETS+R+V E ++ P+P+ KR  G  K S ALEGVVLEP LE RL RVAQSTFNTK+N APFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQ S +GLLLFVDEADAFLRRRSTE ISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPF LPGR ER+RMINLYM +++L   G A+ I V+GVED H++AAAD T GFSGREI+KLAIAWQAAAYG+A T F   LM+EVL+  +QQK QK  W  RA A    G A + PA+
Sbjct:    1 MLKFFRREPSTPGEAA---LAAATGGDDETPKSKDKDAGYKGGGGFDPTGLERAAKAARALDASTNSKSILDLIKVQNQTKAEEHKARAAEYAAYVKQQEIEALGRQAEEARKTLEAQTEHEKRRAEYADQLERKRYVDKINAQRQLREEELKRQEGLVQRQEDLKRKTLEYEAELRQKTELARVKAETEGRIKQERENHDLRLEEARVSAAEYRDTVLEGIKLAGETLGTGIKTFLGDKEKMLAATTTLTAVALGIYTAKTGTGVAGRYLEARLGKPSLVRETSKRSVSEVIKNPIPSFKRAFGFLKPSNALEGVVLEPKLETRLSRVAQSTFNTKKNKAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQASNKGLLLFVDEADAFLRRRSTERISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFELPGRDERMRMINLYMNKFLLAKTGKAKTIVVQGVEDSHLQAAADATEGFSGREISKLAIAWQAAAYGSAGTTFTPELMQEVLDNHLQQKWQKRQWAARAMARSPGGGAMVKPAV 583          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE)

HSP 1 Score: 725 bits (1871), Expect = 6.580e-256
Identity = 384/551 (69.69%), Postives = 448/551 (81.31%), Query Frame = 1
Query:  100 KGNEKAQYSGSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGGARPITVEGVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWWLNRARAXXXXGPAFLPP 1752
            KG E   Y GSGFDP GLERAAKAA+ L  SPN++  L+L+++QE  KA EHR             EL+RV++EAE AR+TL  QTE+ KK A + D+LER+R++D + A+R+MR+ E  +QE       A+RRKTLEYEA LR+QTELARVKAETEG+IRQER+NHDLRLEEAR GA EYRDTVLEGIKLAG+TLG G++EFLGD+++M AATAT+TA+A+GIYTA+ GTGVAGRY+EARLGKPSLVRETSRRT+ + +R P+PT+KR  G+ K   AL GVVLE  LE RL RVAQSTFNTKRN+APFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHK+FDWAQ SR+GLLLFVDEADAFLRRR+TE ISEDLRNALNAFLYRTGE+TDKFMLVYASNQPEQFDWAVNDRIDEMV F LPGR ERLRM+NLYM+ Y+L   G A+ I V+G+ED H++  AD T GFSGREIAKLAIAWQAAAYG   ++F+  LM EVL+  +QQK+QK  WL  A+     G   +PP
Sbjct:   45 KGREDKSYGGSGFDPRGLERAAKAAKILNESPNASMALDLIKQQEMTKAAEHRKQEAEYAAYVKQMELQRVEQEAEAARKTLGLQTEEDKKRAQFADELERKRHVDQVQADRYMRDEEMRKQEELTRKQEAVRRKTLEYEAELRQQTELARVKAETEGKIRQERENHDLRLEEAREGAKEYRDTVLEGIKLAGDTLGAGLQEFLGDKDKMVAATATLTAMALGIYTARTGTGVAGRYIEARLGKPSLVRETSRRTLIQTVRNPIPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNSAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVRFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELMTEVLQAHLQQKRQKQAWLEGAQTSS--GGLIMPP 593          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A4D9D134_9STRA (AAA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA)

HSP 1 Score: 606 bits (1562), Expect = 1.690e-209
Identity = 331/530 (62.45%), Postives = 411/530 (77.55%), Query Frame = 1
Query:  127 GSG-FDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGG-ARPITVEGVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTA--FDVALMEEVLETFVQQK-KQKDWW 1701
            GSG FDP+GLERAAKAA+EL++S N+   L+L+  QE +K  E               E++R ++E EEAR+TL +QTE  K+ A+Y+DQLE        NAE++ +E E  +QE       AI+RKTLEYEA LR+QTELARVKAETEGRI+QERQNHDLR+ +AR  A EYR+TVLEGIKLA   LGKG++EFL D+ER+ +A  T++A+A+G+Y AK  TGVAGRY+EARLGKPSLVR+TSRRT  + LR P+P+L+R++   KA  AL+GVVLE GL  RL RVA ST NTK N APFR+LLL+GPPGTGKTLFAKGLA +SGL+YAI+TGGD+APLG++AVTE+HK+FDWA T+R+G+LLFVDEADAFLRRRSTEH+SE+LRNALNAFLYRTGEA+DKFM+V+ASNQPEQFDWA+NDRIDEMV F LPG  ERL M+ +Y+++Y+L      ARPITVEG+ ++ ++ AA  T GFSGREI+KLAIAWQAAAYG    A   D  L   VLE  +  K K+KDW+
Sbjct:   44 GSGLFDPSGLERAAKAAKELDKSTNAREALKLIELQEVSKQREAEARRTEYEAHVKSLEIQRAQKEGEEARKTLDSQTEHEKRRAEYRDQLEXXXXXXXXNAEKYRKEEELRKQEEYLAKQEAIKRKTLEYEAELRQQTELARVKAETEGRIKQERQNHDLRVAQARAEAKEYRETVLEGIKLASTELGKGLQEFLTDKERLTSAAVTLSAVALGVYAAKTSTGVAGRYIEARLGKPSLVRDTSRRTALQVLRNPVPSLRRLLSTTKAEDALKGVVLEKGLTERLTRVAISTANTKANGAPFRNLLLHGPPGTGKTLFAKGLAANSGLDYAILTGGDVAPLGKEAVTEIHKVFDWAGTTRKGVLLFVDEADAFLRRRSTEHMSEELRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMVDFNLPGEEERLEMVTIYLEKYVLNPPSTKARPITVEGIGEEEVKYAAKVTVGFSGREISKLAIAWQAAAYGAREGAATLDKELYLRVLEQHLASKRKKKDWF 573          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A7S2D4S5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA)

HSP 1 Score: 589 bits (1518), Expect = 4.050e-204
Identity = 321/508 (63.19%), Postives = 391/508 (76.97%), Query Frame = 1
Query:  214 ELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYIL---GGGGGARPITVE-----GVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWWLNRA 1713
            E+++E++  K  EH+              +ERV +EAEE RRTL A+TE  K+VA Y D+LER R++  LNA++ ++E+E  RQ+       A++RK +E+EA LR++TEL RV+ ET+GRIRQER NHDLRLE+A+L A E R TVLEGIKLAG TLG+G R FL D+E+MAAA AT++A+A+G+Y+AKVGTGVAGRYVEARLGKPSLVRETSR +V   LR P+ T+KR+M    AS AL GVVLEP L  RL RVA ST NTKRN APFRHLLLYGPPGTGKT+FAKGLAR SGLEYAI+TGGD+APLGRDAVTE+HK+FDWA TS++GLLLF+DE+DAFLR+RSTE+ISEDLRNALNAFLYRTGE TDKFMLVYASNQPEQFDWAVNDRIDEMV F LPG  ER RMI++Y+ +Y+    G   GA+ I V      G  D+ ++ AA RT GFSGREIAKLAIAWQA+AYG++   F   L++  L   + QKK+K+ W   A
Sbjct:    1 EVIQEEQKTKQMEHQVQAAQYQAYQDQLAVERVGKEAEEQRRTLGAKTEHHKEVAKYNDRLERERFVGQLNAKKQLQEQEIKRQDELAERQAALKRKNIEHEAKLRQETELKRVEEETKGRIRQERDNHDLRLEQAKLEASEQRQTVLEGIKLAGSTLGEGARAFLSDKEKMAAAVATLSAIALGVYSAKVGTGVAGRYVEARLGKPSLVRETSRSSVLADLRSPVATMKRIMASTDASEALSGVVLEPKLADRLSRVATSTSNTKRNKAPFRHLLLYGPPGTGKTMFAKGLARSSGLEYAILTGGDVAPLGRDAVTEIHKVFDWANTSKKGLLLFIDESDAFLRKRSTENISEDLRNALNAFLYRTGEPTDKFMLVYASNQPEQFDWAVNDRIDEMVEFDLPGLEERRRMIDMYLSKYLRDAEGSSSGAKKIVVSFDGEGGGYDKILDQAAARTDGFSGREIAKLAIAWQASAYGSSDNTFTEQLLDSTLSAHIDQKKRKELWNEAA 508          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A7S2ME04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME04_9STRA)

HSP 1 Score: 584 bits (1505), Expect = 3.490e-201
Identity = 337/574 (58.71%), Postives = 415/574 (72.30%), Query Frame = 1
Query:   13 FGGSKP-TPLEEAKKAVAEAEKXXXXXXXXKGNEKAQYSGSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGG---------GGGARPITVEGVEDQHIEA-AADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWW 1701
            FG  KP TP E A +A     K          NE+ +Y GSGFDPTGLERAAKAA+ L++SPN+   LE++REQE +K  E++             +LE+V  EA+EAR+TL +QTE +K  A YQD+LER+RY+D L A++ + ERE     XXXXXXX      +         TE+ RV+ ET+GRI+QER+NHDLRLE+AR+ A E R TVLEGIKLAGET G GVR FL D++RM AA  TV+A+A G+YTAKVGT VAGRY+EARLGKPSL+RETSR ++ +++RRP   L+     GK   AL GVVLE  L  RL RVA ST NTKRN APFRHLLLYGPPGTGKTLFAKGLA+HSGLEYAI+TGGD+APLGRDAVTE+HK+FDWAQTSRRG+LLF+DE+DAFLR+R T+ +SEDLRNALNAFLYRTGE TDKFM+V+ASNQPEQFDWA+NDRID++V F LP   ERL+++N+YM +Y+            G  A+ I ++   D+ + A  A R  GFSGREIAKLAIAWQA+AYG+    F   L+E VL   ++QK+QK  W
Sbjct:    6 FGPRKPSTPGEAALQAAGGDAKKAK-------NEQEKYQGSGFDPTGLERAAKAAKVLDKSPNAKAALEVIREQERSKQMEYKTQMTQYEAHKEHTKLEKVGLEADEARKTLQSQTEHAKHKAQYQDELERKRYVDKLQAQQQLHERELKXXXXXXXXXXXXXXXNIAXXXXXXXXTEMKRVEEETKGRIKQERKNHDLRLEQARIEAEEQRQTVLEGIKLAGETFGAGVRGFLSDKDRMLAAVGTVSAIAAGVYTAKVGTSVAGRYIEARLGKPSLIRETSRISLTQSIRRPWTLLQS----GKKGDALAGVVLEKDLSERLSRVATSTANTKRNKAPFRHLLLYGPPGTGKTLFAKGLAKHSGLEYAILTGGDVAPLGRDAVTEIHKVFDWAQTSRRGVLLFIDESDAFLRKRGTQQMSEDLRNALNAFLYRTGEPTDKFMIVFASNQPEQFDWAINDRIDDLVEFKLPEYDERLQILNMYMDKYLRNSHLQKTGSLFGRAAKRIVLDNTVDEALIAEVAHRIEGFSGREIAKLAIAWQASAYGSTEPDFTRELLELVLANHMEQKQQKQLW 568          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A484EE54_BRELC (AAA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE54_BRELC)

HSP 1 Score: 578 bits (1491), Expect = 5.090e-199
Identity = 327/580 (56.38%), Postives = 412/580 (71.03%), Query Frame = 1
Query:    1 MWSFFGG-----SKPTPLEEAKKAVAEAEKXXXXXXXXKGNEKAQYSGSG-----FDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGG-ARPITVEGVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWWLN 1707
            M+S FGG     S P   E A+  +++               K+   GSG     FDP+GLERAAKAARELE S +++   +L +E E  K  E++             E+ RV++E EE R+TL  +T Q ++ A YQDQL          A+++M+E+E  +QE       A RRKTL+YEA LR++TELARV AETEGRI+QER NHDL LEE R+ A E+R+TVLE IKLAG T+G G+  F+GD E++ A   ++TALAVGIYTAKV T +AG+YVEAR+GKPSLVRETSRR+V + +  P+P++KR + L KA+ ALEGVVLEP L+ RL+ VA STFNTK+N APFRHLLL+GPPGTGKTLFAK LARHSGLEYAI+TGGD++PLGR+ VTE+HKLFDWA  SRRGLLLFVDEADAFL++RS   +SED+RNALNAFLYRTGEA+DKFM+V+ASNQPEQFDWA+NDRIDEMV F LPG  ER+RM+  Y + YI       A+ I VE +E+   E  A +T GFSGREI+KL IA+QAAAYG+  + FD  +M +VL+  +    QK+ W N
Sbjct:    1 MFSGFGGGGSKHSAPASQEPAQNTLSQP--------------KSNGGGSGVNNYSFDPSGLERAAKAARELENSRHASEAFKLAKETEHTKQLENQVKIKENEALYKQYEIVRVQKEGEERRKTLEEETRQHQQRAQYQDQLXXXXXXXXXXAQKYMKEQELKKQEEILARQEASRRKTLDYEAELRQKTELARVAAETEGRIKQERLNHDLHLEEDRVRAKEHRETVLEAIKLAGNTVGSGIMTFVGDSEKLTATVVSLTALAVGIYTAKVSTNIAGKYVEARMGKPSLVRETSRRSVAQVVANPIPSIKRSLRLQKATNALEGVVLEPKLDERLRSVALSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVSPLGREGVTEIHKLFDWASHSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEMVEFRLPGFDERVRMLKQYFENYIRAPKNSRAKKIYVEDIENSDFEDLAGQTDGFSGREISKLVIAFQAAAYGSPTSIFDKNMMRQVLDHHITAHSQKEAWKN 566          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A0P1A5E7_PLAHL (Atpase family aaa domain-containing protein 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5E7_PLAHL)

HSP 1 Score: 568 bits (1465), Expect = 5.360e-195
Identity = 315/526 (59.89%), Postives = 386/526 (73.38%), Query Frame = 1
Query:  127 GSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGG-ARPITVEGVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWW 1701
            G  FDP+GLERAAKAARELE S ++     L +E E  K  E++             E+ RV++E EE R+TL  +T Q ++ A YQDQL            ++M+E+E  +QE       A RRKTL+YEA LR++TELA+V AETEGRI+QER NHDL LEEAR+ A EYR+TVLE IKLAG T+G G+  F+ D+E++ A  AT+TALA+GIYTAKV T VAGRY+EAR+GKPSLVRETSRR+  + +  P+P++KR + L KA+ ALEGVVLEP L  RL+ VA STF+TK N APFRHLLL+GPPGTGKTLFAK LARHSGLEYAI+TGGD+APLGR  VTE+HKLFDWA  SRRGLLLFVDEADAFL++RS   +SED+RNALNAFLYRTGEA+DKFM+V+ASNQPEQFDWA+NDRIDE+V F LPG  ER+RM+  Y   YI       A+ I VE V+D   E  A R  GFSGRE++KL IA+QAAAYG+  + FD  +M EVL+  +   KQK+ W
Sbjct:   45 GYSFDPSGLERAAKAARELESSRHAKDAFSLAKETERTKQLENQAKIKENEALYKQYEIVRVQKEGEERRKTLEEETRQHQQRAQYQDQLXXXXXXXXXXXXKYMKEQELKKQEEILGRQEASRRKTLDYEAELRQKTELAKVAAETEGRIKQERLNHDLHLEEARVRAKEYRETVLESIKLAGNTVGSGIMTFVDDKEKLTATVATLTALALGIYTAKVSTNVAGRYIEARMGKPSLVRETSRRSAVQVVANPIPSIKRALRLQKATDALEGVVLEPKLNERLRSVALSTFHTKANRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGRAGVTEIHKLFDWASQSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEIVEFRLPGYDERVRMLKQYFDEYIREPKNSRAKKIYVEDVQDSDFEDLAARIDGFSGREVSKLVIAFQAAAYGSPTSVFDREMMMEVLDHHITAHKQKEAW 570          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A2D4BKB9_PYTIN (ATPase family AAA domain-containing protein 3A n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BKB9_PYTIN)

HSP 1 Score: 568 bits (1463), Expect = 8.770e-195
Identity = 311/529 (58.79%), Postives = 392/529 (74.10%), Query Frame = 1
Query:  127 GSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILG-GGGGARPITVE-GVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWWLN 1707
            G  FDP+GLERAAKAARELE S ++     + +E E  K  E +             E+ RV++E EE R+TL     Q+++ A YQD            A+++M+E+E  +QE       A RRKTLEYEA LR++TE+A+V AE EGRI+QER NHDL LEEAR+ A EYR+TV+EGIKLAG T+G G+  F+ D+E++    A++TALA+GIYTAKV T VAG+Y+EARLGKPSLVRETSRR+V + +  PLP+++R++ L K   ALEGVVLEP L+ RL+ VA STFNTK+N APFRHLLL+GPPGTGKTLFAK LARHSGLEYAIMTGGD+APLGR+ VTE+HKLFDWA  SRRGLLLFVDEADAFL++RS   +SED+RNALNAFLYRTGEA+DKFM+V+ASNQPEQFDWA+NDR DEMV F LPGR ER+RM+  Y+ +Y++      ++ I VE  V+D   E  A R  GFSGREI+KL IA+QAAAYG+A + F+  ++E+VLE  +   +QK+ W N
Sbjct:   38 GYSFDPSGLERAAKAARELENSRHAKEAFMIAKETERTKQMEQQAKIKENEALYKQYEIVRVQKEGEERRKTLEEXXXQNQQRAQYQDXXXXXXXXXXXXAQKYMKEQELKKQEEMIARQEASRRKTLEYEAELRQKTEMAKVAAEVEGRIKQERLNHDLHLEEARVKAKEYRETVMEGIKLAGSTVGAGIMTFVDDKEKLTTTVASLTALALGIYTAKVSTNVAGKYIEARLGKPSLVRETSRRSVAQVVSNPLPSIRRVLRLQKPHDALEGVVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAIMTGGDVAPLGREGVTEIHKLFDWATHSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRXDEMVEFQLPGRAERVRMLKQYVDKYLVRPASSSSKKIYVEEDVDDAVFEDVAARIDGFSGREISKLVIAFQAAAYGSATSVFNKQMLEDVLEHHLTAHRQKEAWKN 566          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A2D4BYP0_PYTIN (ATPase family AAA domain-containing protein 3A n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYP0_PYTIN)

HSP 1 Score: 570 bits (1468), Expect = 8.410e-191
Identity = 312/529 (58.98%), Postives = 393/529 (74.29%), Query Frame = 1
Query:  127 GSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILG-GGGGARPITVE-GVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWWLN 1707
            G  FDP+GLERAAKAARELE S ++     + +E E  K  E +             E+ RV++E EE R+TL     Q+++ A YQD            A+++M+E+E  +QE       A RRKTLEYEA LR++TE+A+V AE EGRI+QER NHDL LEEAR+ A EYR+TV+EGIKLAG T+G G+  F+ D+E++    A++TALA+GIYTAKV T VAG+Y+EARLGKPSLVRETSRR+V + +  PLP+++R++ L K   ALEGVVLEP L+ RL+ VA STFNTK+N APFRHLLL+GPPGTGKTLFAK LARHSGLEYAIMTGGD+APLGR+ VTE+HKLFDWA  SRRGLLLFVDEADAFL++RS   +SED+RNALNAFLYRTGEA+DKFM+V+ASNQPEQFDWA+NDRIDEMV F LPGR ER+RM+  Y+ +Y++      ++ I VE  V+D   E  A R  GFSGREI+KL IA+QAAAYG+A + F+  ++E+VLE  +   +QK+ W N
Sbjct:   38 GYSFDPSGLERAAKAARELENSRHAKEAFMIAKETERTKQMEQQAKIKENEALYKQYEIVRVQKEGEERRKTLEEXXXQNQQRAQYQDXXXXXXXXXXXXAQKYMKEQELKKQEEMIARQEASRRKTLEYEAELRQKTEMAKVAAEVEGRIKQERLNHDLHLEEARVKAKEYRETVMEGIKLAGSTVGAGIMTFVDDKEKLTTTVASLTALALGIYTAKVSTNVAGKYIEARLGKPSLVRETSRRSVAQVVSNPLPSIRRVLRLQKPHDALEGVVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAIMTGGDVAPLGREGVTEIHKLFDWATHSRRGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEMVEFQLPGRAERVRMLKQYVDKYLVRPASSSSKKIYVEEDVDDAVFEDVAARIDGFSGREISKLVIAFQAAAYGSATSVFNKQMLEDVLEHHLTAHRQKEAWKN 566          
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Match: A0A024GA98_9STRA (AAA domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GA98_9STRA)

HSP 1 Score: 555 bits (1429), Expect = 1.540e-189
Identity = 305/529 (57.66%), Postives = 387/529 (73.16%), Query Frame = 1
Query:  124 SGSGFDPTGLERAAKAARELERSPNSARILELVREQEAAKAEEHRXXXXXXXXXXXXQELERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMREREAARQEXXXXXXXAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNHDLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATVTALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTLKRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTSRRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGG--ARPITVE-GVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALMEEVLETFVQQKKQKDWW 1701
            SG  FDP+GLERAA+AARELE S  +    ++ +E E  K  E +             E+ RV++E EE R+TL       ++ A YQD             +++M+E+E  +QE       A RRKTL+YEA LR++TELA+V AE +G+I+QER NHDL LEEARL A EYR+TVLEGI++AG TLG G+  F  D+E++ +A  + TALA+GIYTAKV TGVAGRYVEARLGKPSLVRETSRR+  +++  P+P++KR++ L K    L+GVVLE  L++RL++VA ST NTK+N APFRHLLL+GPPGTGKTLFAK LARHSGL+YAI+TGGD+APLGR+ VTE+HKLFDWA  SRRGLLLFVDEADAFL++RS   +SED RNALNAFLYRTGEA+DKFM+V+ASNQPEQFDWA+NDRIDEMV F LPG+ ER+RM+  Y +R I        A+PI VE  ++++  E+ A R  GFSGREIAKL IA+QAAAYG++ +  D  +ME VL   +Q  +QK+ W
Sbjct:   43 SGYSFDPSGLERAARAARELENSRYAKEAFQIAKEAERTKQIEQQAKAKENEALYKQYEVMRVQKEGEERRKTLXXXXXXXQQRAQYQDXXXXXXXXXXXXXQKYMKEQELKKQEEIIARQEAARRKTLDYEAELRQRTELAKVAAEVDGKIKQERLNHDLHLEEARLRAKEYRETVLEGIQVAGSTLGTGLMAFFSDKEKLTSAVVSFTALALGIYTAKVTTGVAGRYVEARLGKPSLVRETSRRSTAQSIINPVPSIKRLLNLEKIGDPLDGVVLEHKLDQRLRQVAVSTSNTKKNGAPFRHLLLHGPPGTGKTLFAKALARHSGLDYAILTGGDVAPLGREGVTEIHKLFDWASHSRRGLLLFVDEADAFLQKRSNTVMSEDTRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEMVEFALPGQNERVRMLAQYFERLIQNPSNSKYAKPIVVEEDIDNKLFESIAKRIGGFSGREIAKLVIAFQAAAYGSSTSVIDKEMMENVLTNHLQAHRQKEVW 571          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig761.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YR91_9STRA1.890e-26068.26AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5LJ37_9PHAE6.580e-25669.69AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9D134_9STRA1.690e-20962.45AAA domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S2D4S5_9STRA4.050e-20463.19Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2ME04_9STRA3.490e-20158.71Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A484EE54_BRELC5.090e-19956.38AAA domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A0P1A5E7_PLAHL5.360e-19559.89Atpase family aaa domain-containing protein 3 n=1 ... [more]
A0A2D4BKB9_PYTIN8.770e-19558.79ATPase family AAA domain-containing protein 3A n=2... [more]
A0A2D4BYP0_PYTIN8.410e-19158.98ATPase family AAA domain-containing protein 3A n=1... [more]
A0A024GA98_9STRA1.540e-18957.66AAA domain-containing protein n=2 Tax=Albugo TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig761contigP-wetherbeei_contig761:3472..7782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFV8
Preferred nameATAD3A
PFAMsAAA,DUF3523
Model size1791
Max annot lvl2759|Eukaryota
KEGG koko:K17681
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0010941,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0032940,GO:0036230,GO:0040008,GO:0042119,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0060548,GO:0065007,GO:0070820,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503,GO:0101002,GO:0101003
Exons5
Evalue3.28e-258
EggNOG OGsCOG1223@1|root,KOG0742@2759|Eukaryota
DescriptionATP binding
Cds size1791
COG categoryO
BRITEko00000,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186991.130945-CDS-P-wetherbeei_contig761:3471..39901683186991.130945-CDS-P-wetherbeei_contig761:3471..3990Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig761 3472..3990 +
1683186991.1412866-CDS-P-wetherbeei_contig761:4438..47021683186991.1412866-CDS-P-wetherbeei_contig761:4438..4702Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig761 4439..4702 +
1683186991.1499119-CDS-P-wetherbeei_contig761:4996..52611683186991.1499119-CDS-P-wetherbeei_contig761:4996..5261Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig761 4997..5261 +
1683186991.1583004-CDS-P-wetherbeei_contig761:6588..68601683186991.1583004-CDS-P-wetherbeei_contig761:6588..6860Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig761 6589..6860 +
1683186991.169118-CDS-P-wetherbeei_contig761:7311..77821683186991.169118-CDS-P-wetherbeei_contig761:7311..7782Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig761 7312..7782 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig761.3.1prot_P-wetherbeei_contig761.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig761 3472..7782 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig761.3.1

>prot_P-wetherbeei_contig761.3.1 ID=prot_P-wetherbeei_contig761.3.1|Name=mRNA_P-wetherbeei_contig761.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=597bp
MWSFFGGSKPTPLEEAKKAVAEAEKQAGGGGGGKGNEKAQYSGSGFDPTG
LERAAKAARELERSPNSARILELVREQEAAKAEEHRAKASEYEAYVKQQE
LERVKEEAEEARRTLLAQTEQSKKVADYQDQLERRRYIDTLNAERHMRER
EAARQEELVQRQEAIRRKTLEYEATLREQTELARVKAETEGRIRQERQNH
DLRLEEARLGALEYRDTVLEGIKLAGETLGKGVREFLGDRERMAAATATV
TALAVGIYTAKVGTGVAGRYVEARLGKPSLVRETSRRTVGEALRRPLPTL
KRMMGLGKASGALEGVVLEPGLERRLQRVAQSTFNTKRNAAPFRHLLLYG
PPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQTS
RRGLLLFVDEADAFLRRRSTEHISEDLRNALNAFLYRTGEATDKFMLVYA
SNQPEQFDWAVNDRIDEMVPFGLPGRTERLRMINLYMQRYILGGGGGARP
ITVEGVEDQHIEAAADRTAGFSGREIAKLAIAWQAAAYGNARTAFDVALM
EEVLETFVQQKKQKDWWLNRARAGGGGGPAFLPPALAVGSAEPTATP
back to top

mRNA from alignment at P-wetherbeei_contig761:3472..7782+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig761.3.1 ID=mRNA_P-wetherbeei_contig761.3.1|Name=mRNA_P-wetherbeei_contig761.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4311bp|location=Sequence derived from alignment at P-wetherbeei_contig761:3472..7782+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAGCTTCTTCGGGGGCTCGAAGCCGACTCCTCTGGAGGAGGCAAA GAAGGCCGTGGCGGAGGCCGAGAAGCAAGCAGGGGGCGGCGGCGGTGGGA AGGGCAACGAAAAAGCCCAATACAGCGGCAGCGGCTTCGACCCGACGGGA CTCGAGCGCGCCGCAAAGGCGGCCCGCGAGCTCGAACGCTCGCCGAACTC GGCCCGCATCCTCGAGCTCGTGCGCGAGCAGGAGGCTGCCAAGGCCGAAG AGCACCGCGCCAAGGCCTCGGAGTACGAAGCCTACGTGAAGCAGCAGGAG CTGGAACGCGTCAAGGAGGAGGCCGAGGAGGCGCGTCGCACGCTGCTGGC GCAGACGGAGCAGAGCAAGAAGGTGGCGGACTACCAGGACCAGCTCGAGC GGCGGCGCTACATCGACACGCTCAACGCCGAGCGCCACATGCGGGAGCGC GAGGCGGCGCGGCAGGAGGAGCTCGTCCAGCGGCAGGAAGCCATCCGCCG CAAGACGCTCGAGTACGAGGTCCGTTCTTGGATTTCCGTCATTTTCTCAT GCGGGCGAAAGAAGATGTTTTGCCCTGTCGCCTTAGCTTTCTTCTTTAAA GCAGCTTGGCGATATTTTGGGAGGGGTAAGACGCTTTGCTTGAGAGGGTG TGGCAACTGCCATCCTGAGCCGCACTTTTGGCACTGGAGTCAGATATGTG GAACGGTTCCGGAACGGGGATGTTCTGCAGGTTTTCTTCCTCTCAGGCCA AGCATTCGTTCGGGGAGCCCGATCTCAACCGCCTTATTAGCGTAATATTC CTTTTCTCCCTCATCTTTGCTCTGAGTATAGGCCTTTACAAGAACCTCGA AAGGAGGTGAATGTTTCTTCCTTGCTTGAGCCATATCCGCGAGATTTCTT AGACCATCTACCTCCCACGCCTGGTCTCCCTGCAACTTCTTTCGAACCCC TCCTTGACTCAAAACAGGCGACACTCCGGGAGCAGACGGAGCTGGCACGC GTCAAGGCCGAGACGGAGGGCCGTATCCGGCAGGAGCGCCAAAACCACGA CCTGCGGCTCGAGGAGGCTCGGCTCGGGGCGTTGGAGTACCGCGACACGG TGCTGGAAGGCATCAAGCTGGCCGGGGAGACGCTCGGGAAAGGTGTCAGG GAATTCTTGGGGGACCGGGAGCGGATGGCGGCGGCGACGGCGACGGTGAC GGCGCTCGCCGTGGGCATCTACACCGCTAAGGTCAGTTCAAAGAGGTTGA GGGAGGGTTAGGGCGGTGCCGTGATGTTTCAAGCTAATGAACTGTATTTG CATTCGGGCACGCATTTGCTTGTGTTCGGATGTGATTGGCGTCAGACTCT TGTCTTCCTTTTTGTCATTCCCGATGTTGAAAGGCTTTTCGGTTTTGGCG AACCGCCTGCTGCGATGAAACGGAAAGCTAGTGCTGATGCAACACAGACT TACACCGTTTCTGGTTGCTCTGCAACGCTTCTCTAATCCTGTTTCTGCGT CAACGTCTGGTACAACTGTCTACAGGTCGGCACCGGCGTGGCGGGGCGGT ATGTGGAGGCGCGGCTCGGCAAGCCGTCTCTCGTGCGGGAGACGTCCCGC CGCACGGTAGGCGAGGCGCTGCGGCGGCCGCTACCGACGCTCAAGCGGAT GATGGGTCTCGGCAAGGCATCGGGGGCGCTCGAGGGGGTTGTGCTGGAGC CGGGGCTGGAGCGGCGCTTGCAGCGGGTGGCGCAGTCAACGTTCAACACG AAGCGCAACGCGGCGCCCTTCCGCCACCTCCTGCTGTACGGTAAGAAAGA AGTGTGTTAACGAGGCGGTTTTGGGGTTTGCGAGGATTTGGGTTTTTTGA GAGTCTGAAGAAGTTTTGTCGCTTTAGTTCCATCTTTTCTCTCTTTGCCT TCTCTTTCCTTTGTTGTACTTTGGGATCAAGGGCGTTTCGCGTCTTTTTT TAAAATCTACGAGTCCTTTCGGTCCAAGGGATCCGGAAGGATCTGATTCT TGTGCCTGGTCATAGTTCCACGATGACGACACCCTGCTACCTGAGGATCT GTCAACTCTATGATGACCTCTTTCGCGTCATCCATTTCTCGAGTGGACAA AAAAGGCGATTTACCTGTTGCTGATGGCCCGTTACGGGCAGCTCTTGTGC CTTTTCCCTCCGCATGTTTTTTGCATGTTCTTTTGCCATTTTGCTTGTAA ACGTCATTGAGCCTAGCAGAGAAGGGCCCTCCGCGGCCTCGTTTCCATTA ACTTGCATCTTTATAGAGCTTTTGCTGAAATTTGTCTTGCCCGTGCAAAC GAGGCTGAGGCGTGTTTCGGGCAAACAACGGCTATGGTTCCACTATGACG ACACTCTGCTACCTGAGGATCTATCGCAACTCCGTGATGACCTCTTTAGC GTCATCCATTTCTCGAGTGGACGAAAAGCGCTGCTTTTTCTTCCCAATCG CCGATGGTTGATTGGCGCCGCCAGCTGTTGGGCTGGCCGGTGCAGTTGCC TCTGTACCGCTGTCATGTGCATACGCTTCGCCTTTTGCGTGTGATCGCTG TTGCGACGTTATGGAGAAGCTAAGGCGGTGCCGAGGACTTGTGGCTTTGA ATGCTGGAACATGTGTGCACGTTAAACTAACACTGGGCATGCCACTCCCC AGCCTTCGGTTGTAACGGATGCCTGTGGTTTTTTCGCAGCGGCTTATTTG CTTGGTTTTGAATGTGCCTGTAGGTTGCAACTGGACCGCTTTGTAGGTTG AAAATGGGTCGCATTAGGGGAGTGTATTGCGGGCAATGGATGGTGGGTTT TCCACGATGACGATACTCTGCTACCTGAGGATCTATCAAACTCCGTGATG ACTTCCTTAGCGTCATCCATTTCTTGAGTGGAGAAACCAACCAGCCCCGC CGCTTTCCGTAATATTGGAATCGCTTTAGTCTTACAGTGTTTGTGCAGGG TTGATTGTGAAATTACCGCCAGCCCGACGCCTCTTCCGCGTTCTTGTCGC TTCTGCCGCCCGCTCGCCGCTACTGCTGCTATCACCGCTGCCGCCTTACC TTCTGCCGTACCTTCGCTGATTTGCTACCACCGCCGTCCGCCTATGTCCG CTGCTGTTGGACCGCAGGCCCGCCGGGCACGGGCAAGACGCTGTTCGCCA AGGGGCTGGCGCGGCACTCGGGGCTGGAGTACGCGATCATGACGGGCGGC GACATCGCTCCGCTGGGCCGCGACGCCGTGACAGAGATGCACAAGCTTTT CGACTGGGCCCAGACGAGCCGCCGCGGCCTGCTACTCTTCGTGGACGAGG CGGACGCCTTTTTACGGCGGCGGAGTACTGAGCACATCTCCGAGGATTTG CGGAACGCGCTCAACGCCTTCCTGTACCGCACCGGCGAGGTGCGTGGGAG GCTTTTGGGGCGAACTCTTCGTGCATCCTTGGGGCTGTTTGGCCTTCTCA ATTTATCATTCCTTCTGCCTGCGAATGTACATGCTGATTTGCTGTTGTTG GTTAGCGTTCTGTGCCGCGGCAGCGCCGTGGTGGTGAAGTGCAGGTTATG ACAACCTGCTAGGCTGAGGAGGGCGCTAGGCTGATGATGATCCGCACACT ACTGCAAAGTTTGGGAGCTTTCTGCGCCATTGTGGGCGGTCGGCATTGCT GGCTGGCGAAACCGAGCCTTGCACAGGCCGCTGCACAGGAAGCGGGTTCC TCTTCCCTGTCCCGCAATCGCAAGCATGCGTGAGCATGTGTGGCGCCTAC CGATTCTCATATTACCTCCCCTTTCTCAATTTTCGATCGGTTCCTTCTCT GCGTGAAACCTTTTCCCGAACTCCCGTCAAATCTTTGTAGGCAACGGACA AGTTCATGCTGGTGTACGCATCGAACCAGCCGGAGCAGTTTGACTGGGCC GTCAACGACCGCATCGACGAGATGGTGCCCTTCGGCCTGCCCGGCCGCAC CGAACGCCTCCGCATGATTAACCTATACATGCAACGCTACATCCTGGGCG GCGGCGGCGGTGCGCGGCCCATTACGGTGGAGGGAGTGGAAGACCAGCAT ATTGAGGCGGCGGCAGACCGAACGGCCGGCTTTTCGGGGCGGGAGATCGC CAAGCTGGCCATCGCGTGGCAGGCGGCGGCATACGGCAACGCGCGGACGG CGTTCGACGTGGCTCTGATGGAGGAGGTGCTCGAAACATTCGTGCAGCAG AAGAAGCAGAAGGACTGGTGGCTCAACCGGGCGCGGGCCGGCGGCGGCGG CGGTCCGGCGTTTCTGCCGCCAGCGCTGGCGGTGGGATCGGCGGAGCCCA CGGCCACGCCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig761:3472..7782+

>mRNA_P-wetherbeei_contig761.3.1 ID=mRNA_P-wetherbeei_contig761.3.1|Name=mRNA_P-wetherbeei_contig761.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1791bp|location=Sequence derived from alignment at P-wetherbeei_contig761:3472..7782+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAGCTTCTTCGGGGGCTCGAAGCCGACTCCTCTGGAGGAGGCAAA
GAAGGCCGTGGCGGAGGCCGAGAAGCAAGCAGGGGGCGGCGGCGGTGGGA
AGGGCAACGAAAAAGCCCAATACAGCGGCAGCGGCTTCGACCCGACGGGA
CTCGAGCGCGCCGCAAAGGCGGCCCGCGAGCTCGAACGCTCGCCGAACTC
GGCCCGCATCCTCGAGCTCGTGCGCGAGCAGGAGGCTGCCAAGGCCGAAG
AGCACCGCGCCAAGGCCTCGGAGTACGAAGCCTACGTGAAGCAGCAGGAG
CTGGAACGCGTCAAGGAGGAGGCCGAGGAGGCGCGTCGCACGCTGCTGGC
GCAGACGGAGCAGAGCAAGAAGGTGGCGGACTACCAGGACCAGCTCGAGC
GGCGGCGCTACATCGACACGCTCAACGCCGAGCGCCACATGCGGGAGCGC
GAGGCGGCGCGGCAGGAGGAGCTCGTCCAGCGGCAGGAAGCCATCCGCCG
CAAGACGCTCGAGTACGAGGCGACACTCCGGGAGCAGACGGAGCTGGCAC
GCGTCAAGGCCGAGACGGAGGGCCGTATCCGGCAGGAGCGCCAAAACCAC
GACCTGCGGCTCGAGGAGGCTCGGCTCGGGGCGTTGGAGTACCGCGACAC
GGTGCTGGAAGGCATCAAGCTGGCCGGGGAGACGCTCGGGAAAGGTGTCA
GGGAATTCTTGGGGGACCGGGAGCGGATGGCGGCGGCGACGGCGACGGTG
ACGGCGCTCGCCGTGGGCATCTACACCGCTAAGGTCGGCACCGGCGTGGC
GGGGCGGTATGTGGAGGCGCGGCTCGGCAAGCCGTCTCTCGTGCGGGAGA
CGTCCCGCCGCACGGTAGGCGAGGCGCTGCGGCGGCCGCTACCGACGCTC
AAGCGGATGATGGGTCTCGGCAAGGCATCGGGGGCGCTCGAGGGGGTTGT
GCTGGAGCCGGGGCTGGAGCGGCGCTTGCAGCGGGTGGCGCAGTCAACGT
TCAACACGAAGCGCAACGCGGCGCCCTTCCGCCACCTCCTGCTGTACGGC
CCGCCGGGCACGGGCAAGACGCTGTTCGCCAAGGGGCTGGCGCGGCACTC
GGGGCTGGAGTACGCGATCATGACGGGCGGCGACATCGCTCCGCTGGGCC
GCGACGCCGTGACAGAGATGCACAAGCTTTTCGACTGGGCCCAGACGAGC
CGCCGCGGCCTGCTACTCTTCGTGGACGAGGCGGACGCCTTTTTACGGCG
GCGGAGTACTGAGCACATCTCCGAGGATTTGCGGAACGCGCTCAACGCCT
TCCTGTACCGCACCGGCGAGGCAACGGACAAGTTCATGCTGGTGTACGCA
TCGAACCAGCCGGAGCAGTTTGACTGGGCCGTCAACGACCGCATCGACGA
GATGGTGCCCTTCGGCCTGCCCGGCCGCACCGAACGCCTCCGCATGATTA
ACCTATACATGCAACGCTACATCCTGGGCGGCGGCGGCGGTGCGCGGCCC
ATTACGGTGGAGGGAGTGGAAGACCAGCATATTGAGGCGGCGGCAGACCG
AACGGCCGGCTTTTCGGGGCGGGAGATCGCCAAGCTGGCCATCGCGTGGC
AGGCGGCGGCATACGGCAACGCGCGGACGGCGTTCGACGTGGCTCTGATG
GAGGAGGTGCTCGAAACATTCGTGCAGCAGAAGAAGCAGAAGGACTGGTG
GCTCAACCGGGCGCGGGCCGGCGGCGGCGGCGGTCCGGCGTTTCTGCCGC
CAGCGCTGGCGGTGGGATCGGCGGAGCCCACGGCCACGCCG
back to top