prot_P-wetherbeei_contig7532.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7532.1.1
Unique Nameprot_P-wetherbeei_contig7532.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length684
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7532.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009148Streptococcal non-M secreted SibAPRINTSPR01852SIBAPROTEINcoord: 4..31
score: 50.0
coord: 139..163
score: 34.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 506..656
e-value: 4.1E-10
score: 41.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..531
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..574
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 633..661
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..580
NoneNo IPR availableCDDcd00590RRM_SFcoord: 580..646
e-value: 5.82291E-7
score: 45.3737
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 570..648

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7532contigP-wetherbeei_contig7532:489..3059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7532.1.1mRNA_P-wetherbeei_contig7532.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7532 487..3059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7532.1.1 ID=prot_P-wetherbeei_contig7532.1.1|Name=mRNA_P-wetherbeei_contig7532.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=684bp
EQLKAARAAGKAVAEEEAAREAAARGAAATKVKAAAIAACAAAAAAAGVA
AGSAPSEEAAAEAVALEKTQPPHSPAARKGRGGAAAAAAALTAAAAATAP
EAAAAAATEVLTEAREDAAASRCTDDVAAAPARRGTAAAKAAAAAAAAVA
AAAAASATATAEGGAVEEVAKAPPKGRATRASKAAVAKAAKAAKAEAAKA
KAAETAAAAATAAEQSAPELAAETVPDAERTMGGGRASKTASAGVKKPAK
NARVAATAAGNAADASGEAPRARGPHSPAAASEESDGDSSDENAATTRRS
ALRGRGARRRGADGPAVAAADDAPTIAGRKRATAARSKIGGKGSAVAAGA
AERDVSGSTDPPIPRKQRKGDVTVAAAATGATGAAVAEKGEPMVASVLPM
PGGAVAGSPCTSGRRPATKRGGWASASSSSDSDGGPVAWGGGSRGGGGGG
GGDGGKRPNGKPKRGRATSSAESGSLRRGSRRGRAAAASADGSGSDRRGG
GGNAGRRRKWSRKGSPIDSSRSSSSGRGSSSDSGADRRRRRLHRDRDADD
QGSDGERQGPRRDRYFDTDAKEREPASVAVWNLEPETTKAEFKELMSNFG
EELLDVKLPYNPNSRAPWLATFIDRAAADRVVRAGDNKDHNGMPLEMRPD
MKPPPLAGRMPAAAVAAVAGLPPRHRSRARRSAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009148SibA
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf