mRNA_P-wetherbeei_contig7506.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A2P6TKZ5_CHLSO (Cysteine desulfurase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKZ5_CHLSO) HSP 1 Score: 196 bits (497), Expect = 1.480e-57 Identity = 116/195 (59.49%), Postives = 141/195 (72.31%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVDR 585
G+V V +L D++T+VGHKFGAPKGVAALY+RRGV + LL GGGQE GRRAGTENVLLL GLG+AA + EL AAHMRA+R+ L+ +LL+GL AG R GP ++A RLPNTLS+ + G+QA+ LLA + +AASAGAACHSG G + AMGVP E ALGT RLSVGRH+T R+VDR
Sbjct: 217 GKVPVDVQQLGVDMLTIVGHKFGAPKGVAALYIRRGVAIERLLCGGGQEGGRRAGTENVLLLAGLGKAADLVSQELPATAAHMRALRDSLQSQLLAGLP---AGAARINGPSDDAQRLPNTLSIGIKGIQASALLAELSEQLAASAGAACHSG-----GQSVSAVLRAMGVPHEHALGTLRLSVGRHSTQRDVDR 403
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: E1ZDB8_CHLVA (Aminotran_5 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZDB8_CHLVA) HSP 1 Score: 190 bits (483), Expect = 1.530e-55 Identity = 115/200 (57.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVDRGAAVL 600
G+V V +L D++TVV HKFG PKGVAALYVRRGV L LL GGGQE GRRAGTENV+L+ GLG+AA + EL AAHM AMR+ L+++LL+GL A GP ++ALRLPNTLS+ + G+ AARLLA + +AASAGAACHSG G G + AM VP E A+GT RLS GRHTT ++VDR AA++
Sbjct: 208 GKVDVDVQQLGVDMLTVVAHKFGGPKGVAALYVRRGVRLERLLCGGGQEGGRRAGTENVVLVAGLGKAAELVSRELPATAAHMAAMRDSLQQQLLAGLPPSTA---LIHGPADDALRLPNTLSIGIRGIAAARLLAELSEQLAASAGAACHSGG----GHGVSAVLQAMAVPTEHAVGTLRLSTGRHTTQQDVDRAAALI 400
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A2P6V8I3_9CHLO (Cysteine desulfurase isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8I3_9CHLO) HSP 1 Score: 183 bits (464), Expect = 1.080e-52 Identity = 114/200 (57.00%), Postives = 138/200 (69.00%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVDRGAAVL 600
G+V V L D +T+VGHKFGAPKGVAAL+VRRGV L LL GGGQE G+RAGTE+VLLL GLG AAAV AEL AAHM A+R+ L+++LL+GL G R GP + A RLPNTLS+ + G+QA+ LLA + +AASAGAACHSG G + AM VP+ ALGT RLSVGRHT +VD AA++
Sbjct: 215 GKVEVDVTRLGVDALTIVGHKFGAPKGVAALFVRRGVHLERLLCGGGQEGGQRAGTESVLLLAGLGAAAAVVAAELPATAAHMAALRDSLQQQLLAGLPP---GTARINGPSDAARRLPNTLSIGIAGIQASALLAELSQQLAASAGAACHSG-----GGSVSAVLRAMQVPLPHALGTLRLSVGRHTAQADVDAAAALI 406
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A7S4C1G4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1G4_CHRCT) HSP 1 Score: 179 bits (455), Expect = 1.450e-52 Identity = 114/197 (57.87%), Postives = 134/197 (68.02%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVDRGA 591
G+V + EL D++T+VGHK GAPKGV ALYVR G+ LPPLL GGGQEAGRRAGTE+VLLL LG AA +A +L L+ HMRA R+RL R+ S LG R GP +A RLPNTLS+ + GV AA LL + +AASAGAACHS AA V + AM VP E+ALGT RLS GRHTT REVD+ A
Sbjct: 99 GKVPIDVRELGVDMLTLVGHKMGAPKGVGALYVRAGLKLPPLLHGGGQEAGRRAGTESVLLLAALGAAATIARTDLVPLSRHMRATRDRLAYRITSALGPNAT---RVNGPHNDAQRLPNTLSIGLKGVSAAELLHTLRDQLAASAGAACHSQEAATV----SAVLRAMRVPREYALGTLRLSTGRHTTMREVDQAA 288
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A7S0PSY7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PSY7_MICPS) HSP 1 Score: 185 bits (469), Expect = 4.770e-52 Identity = 113/203 (55.67%), Postives = 139/203 (68.47%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVDRGAAVLATA 609
G++ VK +EL D+ TVVGHK GAPKGVAALYV+ G P L+ GGGQE+GRRAGTENVL +VGLG A + + E + L +HM AMR+ L RRL+ GLGE R GP ++A RLPNTLSV + GV A++LL + VAASAGAACHSG AA AM VP E+A+GT RLSVGRHT +V+ GAA++ A
Sbjct: 347 GKIPVKVNELRVDMCTVVGHKIGAPKGVAALYVKSGAPFSKLVHGGGQESGRRAGTENVLEIVGLGAACELVEREKDVLPSHMSAMRDELLRRLVVGLGENDGSGVRVNGPIDDAERLPNTLSVGIRGVSASQLLDVLKDDVAASAGAACHSGEAAASVSAVL---KAMAVPEEYAIGTLRLSVGRHTCPADVENGAAMVVDA 546
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: C1EHB0_MICCC (Aminotran_5 domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHB0_MICCC) HSP 1 Score: 178 bits (451), Expect = 4.830e-51 Identity = 109/194 (56.19%), Postives = 132/194 (68.04%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVD 582
G++ VK ++L D+ TVVGHK GAPKGVAALYV P LL GGGQE+GRRAGTENVL +VGLG A + + E + L +HM AMR+ L RRL SGLG R GPR++A RLPNTLSV + GV A++LL + VAASAGAACHSG AA +AM VP E+A+GT RLSVGRHT +V+
Sbjct: 195 GKIPVKVNDLGVDMCTVVGHKIGAPKGVAALYVASAAPFSKLLHGGGQESGRRAGTENVLEIVGLGAACELVEREKDILPSHMSAMRDELSRRLASGLGGDDGSGVRVNGPRDDAKRLPNTLSVGIKGVSASQLLDVLKDDVAASAGAACHSGEAAASVSAVL---SAMAVPEEYAIGTLRLSVGRHTCPADVE 385
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A836CMI1_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI1_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.410e-49 Identity = 113/215 (52.56%), Postives = 142/215 (66.05%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGV--PLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKY--AGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGT--------AMGVPVEFALGTFRLSVGRHTTAREVDRGAAVLATA 609
G+V++ EL D++T+VGHKFGAPKG+AALY+RR V PP LLGGGQE G+RAGTE+ ++VGLG+A +A E + AHMR +R+ L L+ LG + R GP + A RLPNTLS++V G++AA LL +G AASAGAACHS A DG+A A AMGVP A+GT RLSVGRHTTA EV+RGA +LA A
Sbjct: 191 GKVKIDVRELGVDMLTIVGHKFGAPKGIAALYIRREVLADFPPFLLGGGQEGGKRAGTESTAMIVGLGKACQIALDEADATTAHMRKLRDLL----LASLGRRLPPGTLSRVHGPSDVARRLPNTLSIAVDGIRAAPLLKRIGDRFAASAGAACHSKPA----DGSAAADCPKISAVLRAMGVPPSLAVGTIRLSVGRHTTADEVERGADILAAA 397
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A7S0X8Y0_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8Y0_9CHLO) HSP 1 Score: 176 bits (447), Expect = 2.700e-49 Identity = 107/203 (52.71%), Postives = 138/203 (67.98%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGTAMGVPVEFALGTFRLSVGRHTTAREVDRGAAVLATA 609
G++ VK L D+ T+VGHK GAPKGVAALYV+ G P L+ GGGQE GRRAGTENVL +VGLG A + + E L +HM A+R+ L++ L + LG R GP +++ RLPNTLS+ V G+ A+ LLA++ +AASAGAACH+G AA G TAM VP E+A+GT RLSVGRHT+A +V RGAA++ A
Sbjct: 284 GKIPVKVHALCVDMCTIVGHKIGAPKGVAALYVKTGTPFRKLMHGGGQEGGRRAGTENVLHIVGLGAACGLVEREAAELPSHMAALRDTLQQTLTAELGGDDGVDVRVNGPEDDSRRLPNTLSIGVRGISASALLASLAEEMAASAGAACHTGEAAASISGVL---TAMHVPEEYAVGTLRLSVGRHTSAADVARGAALIVAA 483
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A0A1Y5IKV9_OSTTA (Cysteine desulfurase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IKV9_OSTTA) HSP 1 Score: 175 bits (444), Expect = 6.420e-49 Identity = 107/208 (51.44%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPL--LLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGT------AMGVPVEFALGTFRLSVGRHTTAREVDRGAAVL 600
G+V VK DEL D++T+VGHK GAPKGV ALYVR G L GGGQE+GRRAGTENV+ +VGLG+A + + E + H++AMR+ L++RL+ LG R GP ++A RLPNTL++ + G+ A+ L +G V+AASAGAACH+ AA AAG T AM VP+EFA+GT RLSVGRHTT +++RGA++L
Sbjct: 214 GKVAVKVDELGVDMVTIVGHKIGAPKGVGALYVRSGTDLGGTKPFYGGGQESGRRAGTENVIHIVGLGKACEIVERERDECPKHLKAMRDDLQKRLVEALGGADGSGVRINGPADDAKRLPNTLNIGIKGLLASISLIELGDVLAASAGAACHTADAA-----AAGGATVSDVLKAMNVPMEFAVGTLRLSVGRHTTKADIERGASLL 416
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Match: A4S300_OSTLU (Aminotran_5 domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S300_OSTLU) HSP 1 Score: 172 bits (435), Expect = 1.830e-48 Identity = 104/203 (51.23%), Postives = 139/203 (68.47%), Query Frame = 1
Query: 1 GQVRVKADELMADLITVVGHKFGAPKGVAALYVRRGVPLPPL--LLGGGQEAGRRAGTENVLLLVGLGRAAAVADAELETLAAHMRAMRERLRRRLLSGLGEKYAGRCRFFGPREEALRLPNTLSVSVPGVQAARLLAAVGGVVAASAGAACHSGAAAGVGDGAAGAGT-AMGVPVEFALGTFRLSVGRHTTAREVDRGAAVL 600
G+V VK D L D+ T+VGHK GAPKGV ALY+RRG L GGGQE+GRRAGTENVL +VGLG+A + + E++T H++AMR+ L++RL+ LG R GPR++ RLPNTL++ + G+ A+ L + ++AASAGAACH+ AA G + AM VP+E+A+GT RLSVGRHT R+V+RGAA+L
Sbjct: 190 GKVPVKVDALGVDMATIVGHKIGAPKGVGALYIRRGTDLGDAKPFYGGGQESGRRAGTENVLHIVGLGKACEIVEREMDTCPKHLKAMRDDLQKRLVDALGGTDGSGVRVNGPRDDDKRLPNTLNIGIKGLLASITLMELSELLAASAGAACHTPDAATSGGATVSSVLEAMNVPMEYAVGTLRLSVGRHTVERDVERGAALL 392 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7506.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7506.1.1 >prot_P-wetherbeei_contig7506.1.1 ID=prot_P-wetherbeei_contig7506.1.1|Name=mRNA_P-wetherbeei_contig7506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp MADLITVVGHKFGAPKGVAALYVRRGVPLPPLLLGGGQEAGRRAGTENVLback to top mRNA from alignment at P-wetherbeei_contig7506:55..783+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7506.1.1 ID=mRNA_P-wetherbeei_contig7506.1.1|Name=mRNA_P-wetherbeei_contig7506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig7506:55..783+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7506:55..783+ >mRNA_P-wetherbeei_contig7506.1.1 ID=mRNA_P-wetherbeei_contig7506.1.1|Name=mRNA_P-wetherbeei_contig7506.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig7506:55..783+ (Phaeothamnion wetherbeei SAG_119_79)back to top |