mRNA_P-wetherbeei_contig75.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A835YV94_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV94_9STRA) HSP 1 Score: 337 bits (863), Expect = 7.510e-111 Identity = 178/310 (57.42%), Postives = 230/310 (74.19%), Query Frame = 1
Query: 1 LHGCAVQAKEAEVQQRLDALRASEPDSPILKTLEEGKAAATAGPPAAKPTQMSEAFKTGPRTLSVVAEYRRVLKSGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGKTPGKALEVREKIPAEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTLA 930
L G A +AK AEV + L AS P S + + L++G+ A A A+P+ ++ + P TLSVVAEYRR L+SGF+ +LEPEL SPMFRDGGA+AVAI++D+N+GGCT D++ V KEQS A G FPG LP+I RD+ V EFQ AK GA +T+S+ LVG ER EL++F + ME IVQVT++EE A+ +GAT+++V G P +A ++++ IP V A VHVDRRSDEGL+EIEDCWILRD+G+N IWASE+LYK GQ Q+ESV+A+IKAIR KASV YGRARG+SG+GEGAKE+L TLA
Sbjct: 51 LKGLAKKAKIAEVAKAKADLEASSPHSAVFEYLKQGQEGAAAK---ARPSVVTPVLRKMPGTLSVVAEYRRNLRSGFIASILEPELLSPMFRDGGASAVAIALDRNSGGCTEADVKAVIKEQSIAIGDFPGALPVITRDLVVDEFQVAHAKTLGAIGVTISMGLVGPERAAELVDFTGALDMEAIVQVTNQEEVEAALQLGATILSVTGNPPDEACDLKKHIPDSVLAIVHVDRRSDEGLDEIEDCWILRDSGYNCIWASEMLYKAGQMQAESVIAVIKAIRAKASVKYGRARGMSGRGEGAKEFLATLA 357
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: D7FHD7_ECTSI (Indole-3-glycerol-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD7_ECTSI) HSP 1 Score: 323 bits (827), Expect = 4.720e-106 Identity = 166/311 (53.38%), Postives = 229/311 (73.63%), Query Frame = 1
Query: 1 LHGCAVQAKEAEVQQRLDALRASEPDSPILKTLEEGKAAATAGPPAAKPTQMSEAFKTGPRTLSVVAEYRRVLKSGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAM-GATVVAVVGKTPGKALEVREKIPAEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTLA 930
L G A +AKEA+V + ++ LR++EPDSP+ + LE+ +A AG P +S+ + TLSVVAEYR++LKSGF++G+L PEL P+ R+GGAA +A++ + TGGC+ D++ V +EQ ++G FPGP+P+I RD+ +SEF+ AKAAGA +T+ ++LVG ER EL F+ +GME ++Q TS+EE AV +++++VGK +A+E+R+ IP V + VHVDRRSDEG++EIEDCW LRDAG++ IWASE+LYKGG Q+ES AI+KAIR KASV YGRARG+SGKGEGAKEYLG LA
Sbjct: 4 LKGLARKAKEAQVSKDMEELRSAEPDSPVFQLLEQAEAGKGAGDGPEYP--LSDVLRKNKGTLSVVAEYRKILKSGFIDGILAPELLCPLLRNGGAACIAVATEPLTGGCSDADLKTVVEEQENSRGDFPGPMPVIIRDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFSKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKMVDEAVELRQYIPDRVVSVVHVDRRSDEGMDEIEDCWQLRDAGYHTIWASEVLYKGGMMQAESAEAILKAIRAKASVKYGRARGMSGKGEGAKEYLGYLA 312
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A7S4D7N4_HETAK (Indole-3-glycerol-phosphate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7N4_HETAK) HSP 1 Score: 234 bits (598), Expect = 1.490e-70 Identity = 138/307 (44.95%), Postives = 193/307 (62.87%), Query Frame = 1
Query: 13 AVQAKEAEVQQRLDALRASEPDSPILKTLEEGKAAATAGPPAAKPTQMSEAFKTGPR-TLSVVAEYRRVL-KSGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGKTPGKALEVREKIPAEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
A +AKE V R ++ S+ D P++K K A G KP+ + + T P+ +L+VVAEYRR K+G+++ +L P S +FR GA A A+ ID+N GG TLDDIR+ KEQ+ KG +P P+P++ARD+ V EFQ E AGA +TLS+S+VG ER +L A +G+E I QVTS EEA A +G +VAV E+ +IP ++ ++R +DEG+EEIE+ W LR G+N +W SE++YKGG + E+ AIIKA+ K S +GRA+ +SGKGEGAKEYLGT+
Sbjct: 88 AKKAKENAVNLRKQSIE-SDADHPVMK-----KMALLQGDGPLKPSTLVKDNLTRPKGSLTVVAEYRRKFSKAGWISEILPPYFLSRIFRISGAKAAAVYIDENLGGATLDDIREFVKEQAENKGEYPSPIPVVARDLIVDEFQLAEVAEAGAAGVTLSLSVVGAERAAQLRAAAAKLGLEAIAQVTSAEEAEQARELGFAMVAVAAGYEALR-EMYPRIPEDLLKIAFLERNTDEGMEEIEEAWQLRRQGYNGVWVSELIYKGGMDEHENTKAIIKALLAKTSTTFGRAKAISGKGEGAKEYLGTI 387
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: K0S3T1_THAOC (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3T1_THAOC) HSP 1 Score: 206 bits (525), Expect = 6.510e-60 Identity = 113/254 (44.49%), Postives = 164/254 (64.57%), Query Frame = 1
Query: 184 TLSVVAEYRRVLK-SGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGK--TPGKALEVREKIPAE---VFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
T+SVVAEY+R L+ SGFV +L+PE+ SP+FR+ GAAAVA+ D+ GGCT DD++ + +EQ A+G PGPLP+I+ D+ V E Q +A+ AGA ++T++ S+VG E+ ++ + A + ME IV V + EEA AV GA++VAVVG GK + E V ++ + ++ LEE+E+ WI RD GFN +W S+ LYK G E AII +++ K+SV + + SGKGEGA+EYLG +
Sbjct: 114 TISVVAEYKRKLEGSGFVTDILQPEILSPVFREFGAAAVAVLADERMGGCTYDDVKAMVEEQEEARGDVPGPLPVISSDLIVDEIQIAQARDAGAVAVTVTYSVVGPEKVEQFIKDARALNMEVIVNVATPEEAQGAVDAGASMVAVVGVDGADGKFAVIEGLSVPEGRRVCTIANILAKDNKALEEVEEAWICRDMGFNCVWISDALYKAGNDPVEHPGAIISSVKAKSSVKFASPKARSGKGEGAREYLGDI 367
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A7S4J4Y1_9STRA (Indole-3-glycerol-phosphate synthase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4Y1_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.110e-58 Identity = 120/309 (38.83%), Postives = 186/309 (60.19%), Query Frame = 1
Query: 22 AKEAEVQQRLDALRASEPDSPILKTLEEGKAAATAG-PPAAKPTQMSEAFKTGPRTLSVVAEYRRVLKS-GFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGK-TPGKALEVREKIP----AEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
AKEAEV++ + + P+ L+ ++ K+A AG PP + P + A T+S+VAEY+R L + GFV+ + PE+ SP FR+ ++AVA+ D+ TGGCT DD+R +A EQ A+G PGP P+I D+ V E Q +KA GA+++ + + + G +R ++ A +G+E + +V S +EA AV GATV++V+G P + E + AEV A + + ++ LEE+E+ W+ RD GFN +W S+ LYK +ES A+I A+R K+SV + + SG+GEGA+EYLG +
Sbjct: 134 AKEAEVRKYCE----NGPEESTLEQVQAMKSALEAGVPPPSGPGLLQRALTKRKGTISIVAEYKRKLDNKGFVDEIFSPEIMSPAFREFFSSAVAVMADERTGGCTYDDVRSIADEQESARGDMPGPCPVICSDLIVDEVQIARSKAFGADAVAIDVGVAGADRFGTFVDAARALGLEVVAEVNSADEAQAAVDGGATVLSVLGGGNPAEKYECVSSLAVPEGAEVCAINKILAKDNKALEEVEEAWVSRDLGFNAVWVSDALYKNAAEPTESPGAVIAAMRAKSSVKWASPKAQSGRGEGAREYLGDI 438
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: B8CAE6_THAPS (Indole-3-glycerol-phosphate synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAE6_THAPS) HSP 1 Score: 200 bits (508), Expect = 2.120e-57 Identity = 109/256 (42.58%), Postives = 164/256 (64.06%), Query Frame = 1
Query: 184 TLSVVAEYRRVLK-SGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGKTPG-------KALEVREKIPAEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
T+S++AEY+R L+ SGF++ +L PE+ SP+FR+ GA AVA+ D+ TGGCT DDI ++ +EQ A G PGPLP+I+ D+ V E Q A AGA+++T++ +VG+E+ + + A +G+E IV V + EEA +AV +GA++++V G ++L V E V ++ + ++ LEE+E+ WI RD GFN +W S+ LYK G E AII ++R K+SV Y + SGKGEGA+EYLG +
Sbjct: 113 TISIIAEYKRKLEGSGFLSEILPPEILSPVFREFGATAVAVLADERTGGCTYDDIVEMVEEQQEAMGEVPGPLPVISSDLIVDEIQIARAADAGAKAVTVTHGVVGEEKVSQFIKNARVLGLETIVNVGTAEEAQSAVDVGASIISVTGVDGADNKFAVIESLSVPEG--RTVCTIANILAKDNKALEEVEEAWICRDRGFNCVWVSDALYKSGNDPVEHPGAIISSMRAKSSVKYASPKARSGKGEGAREYLGDI 366
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A7S2S9Q6_9STRA (Indole-3-glycerol-phosphate synthase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Q6_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.970e-57 Identity = 125/301 (41.53%), Postives = 180/301 (59.80%), Query Frame = 1
Query: 40 QQRLDALR--ASEPDSPILKTL-EEGKAAATAGPPAAKPTQMSEAFKTGPRTLSVVAEYRRVLKS-GFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGKTPGKALEVREKIPAEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLS-GKGEGAKEYLGTL 927
Q+ L LR A + SP+ K L E+GK PP T++ + K PRTLSV+AEYRR ++ G + +L ++ S FR+GGA AV++ +D +TGGCT +D ++ EQ A G FPGP P+I RDV V E Q A+A A+++ LS+ ++G + QE++ A G+E +V+ +E + A A A ++A+ G + A+ + IP + +V D+ L E ED W LRDAG N + ASE+L+K G G E +++IKAIR+K SV Y RA G GKGEGAKE+LG L
Sbjct: 62 QKSLTPLREAAGQDGSPVAKALAEKGKF-----PPE---TKLLTSLKKPPRTLSVIAEYRRKSQNCGLIADMLPGKIMSRDFREGGAHAVSVYMDPSTGGCTEEDFEEIVTEQQSALGGFPGPAPVIYRDVVVDEVQLAHARACRADAVVLSVGVLGDD-LQEMMAAAGEFGLEVVVEAKNEADIERAAATDAPMIALAGMSVDDAIALAPAIPEDRLKIAYVPVYDDKNLIEAEDAWRLRDAGINSVLASEVLFKFGMGDGEHSISVIKAIRSKGSVKYARASGAYVGKGEGAKEFLGHL 353
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A7S2JSA3_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSA3_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.490e-55 Identity = 114/309 (36.89%), Postives = 183/309 (59.22%), Query Frame = 1
Query: 22 AKEAEVQQRLDALRASEPDSPILKTLEEGKAAATAGPPAAKPTQMSEAFKTGPRTLSVVAEYRRVL--KSGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVG-KTPGKALEVREKIPAE----VFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
AKE ++++ ++A + S+ L ++ A GP P Q + + G T++++AEY+R + F++ +L ++ SP+FR+GGA A+A+ D+ GGCT DD+ +AKEQ A+G PGPLPII+ D+ V E Q ++ AGAE++ ++ S+VG ER + L+ G+E IV V ++EEA AV +G ++ V +P + +V + + A + + R ++ LEE+E+ W+LRD GF IW S+ LYK G E AII +++ K+SV + AR +GKGEGA+EYLG +
Sbjct: 47 AKENDLRKMIEAGQISDEVKAKLDEMKSASAEKREGP---GPVQAALTKRKG--TITIIAEYKRKFDENAAFISEILPADILSPVFREGGATAIAVMADERMGGCTYDDMVVLAKEQESARGDMPGPLPIISSDMIVDELQIAQSAIAGAEAVVITYSVVGPERLEGLIEQCSVAGLECIVTVNNKEEAQKAVDLGVRMICVSALNSPDEKFDVVDGLSAPNDEPICKIASILARDNKQLEEVEEAWVLRDKGFQAIWVSDALYKSGNDPIEHPGAIIASMKAKSSVKFASARVKTGKGEGAREYLGDI 350
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A7S4QWQ1_9STRA (Indole-3-glycerol-phosphate synthase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWQ1_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.580e-53 Identity = 103/257 (40.08%), Postives = 159/257 (61.87%), Query Frame = 1
Query: 184 TLSVVAEYRRVL---KSGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVGK--TPGKALEVREKIPAEVFAAV----HVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
T+S++AEY+R L K+G+++ + P++ SP FR+ GA A+A+ D+ GGCT +D+ +EQ A+G PGPLP+I+ D+ V E Q +A A GA+++T+++ +V E+ L A + +E IV V + E+A AV GAT++ V G K + + I E AV ++ ++++ LEE+E+ WI RDAGFN +W S+ LYKGG E AIIK++ K+SV + + SGKGEGA+EYLG +
Sbjct: 104 TISLIAEYKRRLMDDKAGYIDEIFSPKIMSPTFREFGATALAVMADERMGGCTYEDVAMFVEEQKKAQGDMPGPLPVISSDLIVDELQLAQAAAVGAKAVTITLGVVSAEKVSFYLKAAKTLDLEVIVNVATAEQAQAAVDAGATLICVAGVDGAENKKAVIADLIVPEGNKAVCKIANIVAKNNQQLEEVEEAWICRDAGFNAVWVSDALYKGGSDPVEHPGAIIKSMIAKSSVKWASPKARSGKGEGAREYLGDI 360
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Match: A0A7S1URY4_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URY4_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.190e-48 Identity = 89/241 (36.93%), Postives = 140/241 (58.09%), Query Frame = 1
Query: 208 RRVLKSGFVNGVLEPELFSPMFRDGGAAAVAISIDKNTGGCTLDDIRKVAKEQSYAKGSFPGPLPIIARDVTVSEFQACEAKAAGAESITLSISLVGKERCQELLNFAWHIGMEPIVQVTSEEEAANAVAMGATVVAVVG-KTPGKALEVREKIPAEVFAAVHVDRRSDEGLEEIEDCWILRDAGFNVIWASEILYKGGQGQSESVVAIIKAIRTKASVLYGRARGLSGKGEGAKEYLGTL 927
RR+ G+++ + +PE+ SP FR+ G +A+ D GGCT DD++K +EQ + PG + +I D+ V E Q ++ AAG + + S+VG + C +L+ G+EPIV V + ++A AV +GA +++VVG + +P V ++ + ++ LEE+E+ W RD GFN IW S+ LYK G SE+ AIIKA+ K+SV + + SG+GEGA+EYLG +
Sbjct: 2 RRIENGGYIDDIFDPEVLSPQFREVGVGGIAVMADYRMGGCTYDDLKKFVEEQRRHRMEVPGSVMVINNDLIVDEVQVAQSAAAGVAGLVIDFSVVGHDLCDKLMRATQAAGLEPIVAVETPQQAQAAVQLGAPMISVVGIDAVDDKVSCIADVPDHVLTIANILAKDNKQLEEVEEAWKCRDNGFNCIWVSDALYKSGNDPSETPGAIIKAMLAKSSVKWASPKARSGRGEGAREYLGDI 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig75.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig75.1.3 >prot_P-wetherbeei_contig75.1.3 ID=prot_P-wetherbeei_contig75.1.3|Name=mRNA_P-wetherbeei_contig75.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp MSEAFKTGPRTLSVVAEYRRVLKSGFVNGVLEPELFSPMFRDGGAAAVAIback to top mRNA from alignment at P-wetherbeei_contig75:462..3222+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig75.1.3 ID=mRNA_P-wetherbeei_contig75.1.3|Name=mRNA_P-wetherbeei_contig75.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2761bp|location=Sequence derived from alignment at P-wetherbeei_contig75:462..3222+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig75:462..3222+ >mRNA_P-wetherbeei_contig75.1.3 ID=mRNA_P-wetherbeei_contig75.1.3|Name=mRNA_P-wetherbeei_contig75.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig75:462..3222+ (Phaeothamnion wetherbeei SAG_119_79)back to top |